RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 NLRP10Q86W26 655 aa13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 PIAS4Q8N2W9 510 aaPredicted RBP13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 CNKSR1Q969H4 720 aa13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 GOLGB1Q14789 3259 aaKnown RBP13.69□□□□□ -0.22
CDC42SE1-206ENST00000492796 VAMP4O75379 141 aa13.68□□□□□ -0.22
CDC42SE1-206ENST00000492796 CRY2Q49AN0 593 aa13.68□□□□□ -0.22
CDC42SE1-206ENST00000492796 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
CDC42SE1-206ENST00000492796 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
CDC42SE1-206ENST00000492796 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
CDC42SE1-206ENST00000492796 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
CDC42SE1-206ENST00000492796 ADCY9O60503 1353 aa13.67□□□□□ -0.22
CDC42SE1-206ENST00000492796 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
CDC42SE1-206ENST00000492796 SLX4Q8IY92 1834 aa13.67□□□□□ -0.22
CDC42SE1-206ENST00000492796 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
CDC42SE1-206ENST00000492796 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
CDC42SE1-206ENST00000492796 ZNF784Q8NCA9 323 aaPredicted RBP13.66□□□□□ -0.22
CDC42SE1-206ENST00000492796 TRMT112Q9UI30 125 aaKnown RBP13.66□□□□□ -0.22
CDC42SE1-206ENST00000492796 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 ALDH1B1P30837 517 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 FLIIQ13045 1269 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 PRPF40BQ6NWY9 871 aaKnown RBP13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 NLRP3Q96P20 1036 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 SBF1O95248 1867 aa13.65□□□□□ -0.22
CDC42SE1-206ENST00000492796 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
CDC42SE1-206ENST00000492796 TCERG1O14776 1098 aaKnown RBP13.64□□□□□ -0.23
CDC42SE1-206ENST00000492796 HOXA10P31260 410 aaPredicted RBP13.64□□□□□ -0.23
CDC42SE1-206ENST00000492796 CCDC191Q8NCU4 936 aa13.64□□□□□ -0.23
CDC42SE1-206ENST00000492796 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
CDC42SE1-206ENST00000492796 MYD88Q99836 296 aa13.64□□□□□ -0.23
CDC42SE1-206ENST00000492796 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
CDC42SE1-206ENST00000492796 PI4KAP2A4QPH2 592 aa13.63□□□□□ -0.23
CDC42SE1-206ENST00000492796 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
CDC42SE1-206ENST00000492796 G2E3Q7L622 706 aa13.63□□□□□ -0.23
CDC42SE1-206ENST00000492796 PI4KAP1Q8N8J0 262 aa13.63□□□□□ -0.23
CDC42SE1-206ENST00000492796 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
CDC42SE1-206ENST00000492796 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 C21orf2O43822 256 aa13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 HSP90B1P14625 803 aaKnown RBP13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 TRMT2AQ8IZ69 625 aaKnown RBP13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 CRAMP1Q96RY5 1269 aa13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 LTBP3Q9NS15 1303 aa13.62□□□□□ -0.23
CDC42SE1-206ENST00000492796 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
CDC42SE1-206ENST00000492796 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
CDC42SE1-206ENST00000492796 C7orf43Q8WVR3 580 aa13.61□□□□□ -0.23
CDC42SE1-206ENST00000492796 FAM89AQ96GI7 184 aa13.61□□□□□ -0.23
CDC42SE1-206ENST00000492796 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 NFKBIEO00221 500 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 LMNB1P20700 586 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 RASSF7Q02833 373 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 CCDC88AQ3V6T2 1871 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 C9orf131Q5VYM1 1079 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 CC2D2BQ6DHV5 1058 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 DNAAF4Q8WXU2 420 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 TAOK3Q9H2K8 898 aa13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 ZC3H4Q9UPT8 1303 aaKnown RBP13.6□□□□□ -0.23
CDC42SE1-206ENST00000492796 IRS4O14654 1257 aaPredicted RBP13.59□□□□□ -0.23
CDC42SE1-206ENST00000492796 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
CDC42SE1-206ENST00000492796 KCNA4P22459 653 aa13.59□□□□□ -0.23
CDC42SE1-206ENST00000492796 SYNE4Q8N205 404 aa13.59□□□□□ -0.23
CDC42SE1-206ENST00000492796 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
CDC42SE1-206ENST00000492796 ABCC4O15439 1325 aa13.59□□□□□ -0.23
CDC42SE1-206ENST00000492796 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
CDC42SE1-206ENST00000492796 MYH3P11055 1940 aa13.58□□□□□ -0.23
CDC42SE1-206ENST00000492796 SNED1Q8TER0 1413 aa13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 NEURL1BA8MQ27 555 aa13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 PPEF1O14829 653 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 ALDH1L2Q3SY69 923 aa13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 RTKN2Q8IZC4 609 aa13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 LRRC37AA6NMS7 1700 aa13.58□□□□□ -0.24
CDC42SE1-206ENST00000492796 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-206ENST00000492796 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
CDC42SE1-206ENST00000492796 TMC4Q7Z404 712 aa13.57□□□□□ -0.24
CDC42SE1-206ENST00000492796 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-206ENST00000492796 PTPRCP08575 1304 aa13.57□□□□□ -0.24
CDC42SE1-206ENST00000492796 PDE8AO60658 829 aa13.56□□□□□ -0.24
CDC42SE1-206ENST00000492796 BBOX1O75936 387 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms