RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 NMRK2Q9NPI5 230 aa30.67■■■□□ 2.5
CTDSP1-211ENST00000492545 ABCC12Q96J65 1359 aa30.66■■■□□ 2.5
CTDSP1-211ENST00000492545 SLX4Q8IY92 1834 aa30.66■■■□□ 2.5
CTDSP1-211ENST00000492545 SLC10A5Q5PT55 438 aa30.66■■■□□ 2.5
CTDSP1-211ENST00000492545 ANKRD13DQ6ZTN6 518 aa30.66■■■□□ 2.5
CTDSP1-211ENST00000492545 RTKN2Q8IZC4 609 aa30.66■■■□□ 2.5
CTDSP1-211ENST00000492545 PLBD2Q8NHP8 589 aa30.66■■■□□ 2.5
CTDSP1-211ENST00000492545 RPGRQ92834 1020 aaKnown RBP30.66■■■□□ 2.5
CTDSP1-211ENST00000492545 GLTPD2A6NH11 291 aa30.65■■■□□ 2.5
CTDSP1-211ENST00000492545 CC2D2BQ6DHV5 1058 aa30.64■■■□□ 2.5
CTDSP1-211ENST00000492545 NLRP3Q96P20 1036 aa30.64■■■□□ 2.5
CTDSP1-211ENST00000492545 DPY19L2Q6NUT2 758 aa30.63■■■□□ 2.49
CTDSP1-211ENST00000492545 NLRP10Q86W26 655 aa30.63■■■□□ 2.49
CTDSP1-211ENST00000492545 WWC1Q8IX03 1113 aa30.63■■■□□ 2.49
CTDSP1-211ENST00000492545 ARFGEF2Q9Y6D5 1785 aa30.62■■■□□ 2.49
CTDSP1-211ENST00000492545 GRIPAP1Q4V328 841 aa30.62■■■□□ 2.49
CTDSP1-211ENST00000492545 C16orf71Q8IYS4 520 aaPredicted RBP30.62■■■□□ 2.49
CTDSP1-211ENST00000492545 RBM17Q96I25 401 aaKnown RBP30.62■■■□□ 2.49
CTDSP1-211ENST00000492545 CRAMP1Q96RY5 1269 aa30.62■■■□□ 2.49
CTDSP1-211ENST00000492545 FER1L6Q2WGJ9 1857 aa30.61■■■□□ 2.49
CTDSP1-211ENST00000492545 FKBP4Q02790 459 aaKnown RBP eCLIP30.6■■■□□ 2.492e-9■■■■■ 48
CTDSP1-211ENST00000492545 IL16Q14005 1332 aa30.6■■■□□ 2.49
CTDSP1-211ENST00000492545 C8orf58Q8NAV2 365 aa30.59■■■□□ 2.49
CTDSP1-211ENST00000492545 RBM46Q8TBY0 533 aaKnown RBP30.59■■■□□ 2.49
CTDSP1-211ENST00000492545 RRAGCQ9HB90 399 aa30.59■■■□□ 2.49
CTDSP1-211ENST00000492545 ELL2O00472 640 aaPredicted RBP30.58■■■□□ 2.49
CTDSP1-211ENST00000492545 HSPA6P17066 643 aa30.58■■■□□ 2.49
CTDSP1-211ENST00000492545 CCDC30Q5VVM6 783 aa30.58■■■□□ 2.49
CTDSP1-211ENST00000492545 TRMT112Q9UI30 125 aaKnown RBP30.58■■■□□ 2.49
CTDSP1-211ENST00000492545 SH3TC1Q8TE82 1336 aa30.57■■■□□ 2.48
CTDSP1-211ENST00000492545 VEGFAP15692 232 aaPredicted RBP30.57■■■□□ 2.48
CTDSP1-211ENST00000492545 TRIM28Q13263 835 aaKnown RBP30.56■■■□□ 2.48
CTDSP1-211ENST00000492545 ISCA1Q9BUE6 129 aa30.56■■■□□ 2.48
CTDSP1-211ENST00000492545 GOLGA2Q08379 1002 aa30.55■■■□□ 2.48
CTDSP1-211ENST00000492545 TNRC6CQ9HCJ0 1690 aaKnown RBP30.55■■■□□ 2.48
CTDSP1-211ENST00000492545 PSMD1Q99460 953 aa30.54■■■□□ 2.48
CTDSP1-211ENST00000492545 FSTL1Q12841 308 aa30.53■■■□□ 2.48
CTDSP1-211ENST00000492545 RIC3Q7Z5B4 369 aa30.53■■■□□ 2.48
CTDSP1-211ENST00000492545 WDR63Q8IWG1 891 aa30.53■■■□□ 2.48
CTDSP1-211ENST00000492545 TMX4Q9H1E5 349 aaPredicted RBP30.53■■■□□ 2.48
CTDSP1-211ENST00000492545 CCDC88AQ3V6T2 1871 aa30.53■■■□□ 2.48
CTDSP1-211ENST00000492545 C3orf67Q6ZVT6 689 aa30.52■■■□□ 2.48
CTDSP1-211ENST00000492545 CACNA1SQ13698 1873 aa30.51■■■□□ 2.47
CTDSP1-211ENST00000492545 DDX58O95786 925 aaKnown RBP30.51■■■□□ 2.47
CTDSP1-211ENST00000492545 OLFM4Q6UX06 510 aa30.51■■■□□ 2.47
CTDSP1-211ENST00000492545 SYNE4Q8N205 404 aa30.51■■■□□ 2.47
CTDSP1-211ENST00000492545 TSR2Q969E8 191 aaKnown RBP30.51■■■□□ 2.47
CTDSP1-211ENST00000492545 DICER1Q9UPY3 1922 aaKnown RBP30.5■■■□□ 2.47
CTDSP1-211ENST00000492545 PPEF1O14829 653 aaPredicted RBP30.5■■■□□ 2.47
CTDSP1-211ENST00000492545 BBOX1O75936 387 aa30.5■■■□□ 2.47
CTDSP1-211ENST00000492545 ZNF277Q9NRM2 450 aaPredicted RBP30.5■■■□□ 2.47
CTDSP1-211ENST00000492545 ANKRD36CQ5JPF3 1778 aa30.5■■■□□ 2.47
CTDSP1-211ENST00000492545 CEP350Q5VT06 3117 aa30.49■■■□□ 2.47
CTDSP1-211ENST00000492545 HCLS1P14317 486 aaPredicted RBP30.49■■■□□ 2.47
CTDSP1-211ENST00000492545 TSPYL6Q8N831 410 aa30.49■■■□□ 2.47
CTDSP1-211ENST00000492545 PHAXQ9H814 394 aaKnown RBP30.49■■■□□ 2.47
CTDSP1-211ENST00000492545 ATP5J2-PTCD1G3V325 749 aa30.48■■■□□ 2.47
CTDSP1-211ENST00000492545 IARSP41252 1262 aaKnown RBP30.48■■■□□ 2.47
CTDSP1-211ENST00000492545 STK31Q9BXU1 1019 aa30.48■■■□□ 2.47
CTDSP1-211ENST00000492545 TIAM2Q8IVF5 1701 aa30.47■■■□□ 2.47
CTDSP1-211ENST00000492545 HSP90B1P14625 803 aaKnown RBP30.47■■■□□ 2.47
CTDSP1-211ENST00000492545 DDX46Q7L014 1031 aaKnown RBP30.47■■■□□ 2.47
CTDSP1-211ENST00000492545 ATP6V0A2Q9Y487 856 aa30.47■■■□□ 2.47
CTDSP1-211ENST00000492545 SNED1Q8TER0 1413 aa30.47■■■□□ 2.47
CTDSP1-211ENST00000492545 APLP1P51693 650 aa30.46■■■□□ 2.47
CTDSP1-211ENST00000492545 TWISTNBQ3B726 338 aaPredicted RBP30.46■■■□□ 2.47
CTDSP1-211ENST00000492545 SMC1BQ8NDV3 1235 aa30.46■■■□□ 2.47
CTDSP1-211ENST00000492545 ABCC4O15439 1325 aa30.46■■■□□ 2.47
CTDSP1-211ENST00000492545 TMC4Q7Z404 712 aa30.44■■■□□ 2.46
CTDSP1-211ENST00000492545 FAM9BQ8IZU0 186 aa30.44■■■□□ 2.46
CTDSP1-211ENST00000492545 CCDC191Q8NCU4 936 aa30.44■■■□□ 2.46
CTDSP1-211ENST00000492545 JDP2Q8WYK2 163 aa30.44■■■□□ 2.46
CTDSP1-211ENST00000492545 FAM89AQ96GI7 184 aa30.44■■■□□ 2.46
CTDSP1-211ENST00000492545 VPS33BQ9H267 617 aa30.44■■■□□ 2.46
CTDSP1-211ENST00000492545 POTECB2RU33 542 aa30.43■■■□□ 2.46
CTDSP1-211ENST00000492545 SF3B3Q15393 1217 aaKnown RBP30.43■■■□□ 2.46
CTDSP1-211ENST00000492545 ZBTB38Q8NAP3 1195 aaPredicted RBP30.43■■■□□ 2.46
CTDSP1-211ENST00000492545 FZD9O00144 591 aa30.42■■■□□ 2.46
CTDSP1-211ENST00000492545 DDNO94850 711 aaPredicted RBP30.42■■■□□ 2.46
CTDSP1-211ENST00000492545 SP8Q8IXZ3 490 aa30.42■■■□□ 2.46
CTDSP1-211ENST00000492545 METTL22Q9BUU2 404 aaPredicted RBP30.42■■■□□ 2.46
CTDSP1-211ENST00000492545 WDR90Q96KV7 1748 aa30.42■■■□□ 2.46
CTDSP1-211ENST00000492545 IQCA1LA6NCM1 817 aa30.41■■■□□ 2.46
CTDSP1-211ENST00000492545 GRAPQ13588 217 aa30.41■■■□□ 2.46
CTDSP1-211ENST00000492545 GRAPLQ8TC17 118 aaPredicted RBP30.41■■■□□ 2.46
CTDSP1-211ENST00000492545 L3MBTL3Q96JM7 780 aaPredicted RBP30.41■■■□□ 2.46
CTDSP1-211ENST00000492545 SALL2Q9Y467 1007 aaPredicted RBP30.41■■■□□ 2.46
CTDSP1-211ENST00000492545 IRS4O14654 1257 aaPredicted RBP30.4■■■□□ 2.46
CTDSP1-211ENST00000492545 TCERG1O14776 1098 aaKnown RBP30.4■■■□□ 2.46
CTDSP1-211ENST00000492545 KSR2Q6VAB6 950 aa30.4■■■□□ 2.46
CTDSP1-211ENST00000492545 SUPT20HQ8NEM7 779 aa30.4■■■□□ 2.46
CTDSP1-211ENST00000492545 MYD88Q99836 296 aa30.4■■■□□ 2.46
CTDSP1-211ENST00000492545 FANCIQ9NVI1 1328 aa30.4■■■□□ 2.46
CTDSP1-211ENST00000492545 RTFDC1Q9BY42 306 aaPredicted RBP30.38■■■□□ 2.45
CTDSP1-211ENST00000492545 CWC25Q9NXE8 425 aaPredicted RBP30.38■■■□□ 2.45
CTDSP1-211ENST00000492545 SLC4A2P04920 1241 aa30.37■■■□□ 2.45
CTDSP1-211ENST00000492545 LARGE2Q8N3Y3 721 aa30.37■■■□□ 2.45
CTDSP1-211ENST00000492545 MAP3K2Q9Y2U5 619 aa30.37■■■□□ 2.45
CTDSP1-211ENST00000492545 PI4KAP2A4QPH2 592 aa30.36■■■□□ 2.45
CTDSP1-211ENST00000492545 PCCAP05165 728 aaPredicted RBP30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms