RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.69	■□□□□ 0.58
COPS7B-222	ENST00000492423	ANKRD44	Q8N8A2	993 aa		18.69	■□□□□ 0.58
COPS7B-222	ENST00000492423	LRRFIP2	Q9Y608	721 aa	Known RBP	18.69	■□□□□ 0.58
COPS7B-222	ENST00000492423		A0A087WZG4	1122 aa		18.68	■□□□□ 0.58
COPS7B-222	ENST00000492423	ARX	Q96QS3	562 aa		18.68	■□□□□ 0.58
COPS7B-222	ENST00000492423	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.68	■□□□□ 0.58
COPS7B-222	ENST00000492423	DDX60	Q8IY21	1712 aa	Known RBP	18.68	■□□□□ 0.58
COPS7B-222	ENST00000492423	CASP7	P55210	303 aa		18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	TRIM28	Q13263	835 aa	Known RBP	18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	HSP90AB3P	Q58FF7	597 aa		18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	NPM2	Q86SE8	214 aa	Known RBP	18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	CCDC191	Q8NCU4	936 aa		18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	AK7	Q96M32	723 aa		18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	RWDD1	Q9H446	243 aa	Predicted RBP	18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	CWC25	Q9NXE8	425 aa	Predicted RBP	18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	RTCB	Q9Y3I0	505 aa	Known RBP	18.67	■□□□□ 0.58
COPS7B-222	ENST00000492423	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.66	■□□□□ 0.58
COPS7B-222	ENST00000492423	ZNF34	Q8IZ26	560 aa		18.66	■□□□□ 0.58
COPS7B-222	ENST00000492423	AKT1S1	Q96B36	256 aa		18.66	■□□□□ 0.58
COPS7B-222	ENST00000492423	SUCLG2	Q96I99	432 aa		18.66	■□□□□ 0.58
COPS7B-222	ENST00000492423	KAZALD1	Q96I82	304 aa		18.65	■□□□□ 0.58
COPS7B-222	ENST00000492423	BCL2L12	Q9HB09	334 aa		18.65	■□□□□ 0.58
COPS7B-222	ENST00000492423	UBN2	Q6ZU65	1347 aa		18.65	■□□□□ 0.58
COPS7B-222	ENST00000492423		H7C1W4	665 aa		18.64	■□□□□ 0.57
COPS7B-222	ENST00000492423	RGL2	O15211	777 aa		18.64	■□□□□ 0.57
COPS7B-222	ENST00000492423	NLRP10	Q86W26	655 aa		18.64	■□□□□ 0.57
COPS7B-222	ENST00000492423	CAMKK2	Q96RR4	588 aa		18.64	■□□□□ 0.57
COPS7B-222	ENST00000492423	NARF	Q9UHQ1	456 aa		18.64	■□□□□ 0.57
COPS7B-222	ENST00000492423	GPT	P24298	496 aa		18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	ATP8B2	P98198	1209 aa		18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	ZNF827	Q17R98	1081 aa		18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	UBE3B	Q7Z3V4	1068 aa		18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	JARID2	Q92833	1246 aa	Predicted RBP	18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	ARHGEF1	Q92888	912 aa	Known RBP	18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	SRP68	Q9UHB9	627 aa	Known RBP	18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	EP400	Q96L91	3159 aa		18.63	■□□□□ 0.57
COPS7B-222	ENST00000492423	PNMA6E	A0A0J9YXQ4	647 aa		18.62	■□□□□ 0.57
COPS7B-222	ENST00000492423	MTX1	Q13505	466 aa		18.62	■□□□□ 0.57
COPS7B-222	ENST00000492423	SMC5	Q8IY18	1101 aa		18.62	■□□□□ 0.57
COPS7B-222	ENST00000492423	USP42	Q9H9J4	1324 aa	Known RBP	18.62	■□□□□ 0.57
COPS7B-222	ENST00000492423	PHF14	O94880	888 aa		18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	PCCA	P05165	728 aa	Predicted RBP	18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	HMGB2	P26583	209 aa	Known RBP	18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	SSFA2	P28290	1259 aa		18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	EN1	Q05925	392 aa	Predicted RBP	18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	EZH2	Q15910	746 aa	Known RBP	18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	EPHA10	Q5JZY3	1008 aa		18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	CLEC4G	Q6UXB4	293 aa		18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	ZNF652	Q9Y2D9	606 aa		18.61	■□□□□ 0.57
COPS7B-222	ENST00000492423	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.6	■□□□□ 0.57
COPS7B-222	ENST00000492423	USPL1	Q5W0Q7	1092 aa		18.6	■□□□□ 0.57
COPS7B-222	ENST00000492423	BICC1	Q9H694	974 aa	Known RBP	18.6	■□□□□ 0.57
COPS7B-222	ENST00000492423	HDAC5	Q9UQL6	1122 aa		18.6	■□□□□ 0.57
COPS7B-222	ENST00000492423	CDHR2	Q9BYE9	1310 aa		18.59	■□□□□ 0.57
COPS7B-222	ENST00000492423	TRAPPC3L	Q5T215	181 aa		18.59	■□□□□ 0.57
COPS7B-222	ENST00000492423	PPP1R42	Q7Z4L9	355 aa		18.59	■□□□□ 0.57
COPS7B-222	ENST00000492423	SSH3	Q8TE77	659 aa		18.59	■□□□□ 0.57
COPS7B-222	ENST00000492423	HMMR	O75330	724 aa		18.58	■□□□□ 0.56
COPS7B-222	ENST00000492423	BAG6	P46379	1132 aa		18.58	■□□□□ 0.56
COPS7B-222	ENST00000492423	RABL6	Q3YEC7	729 aa	Predicted RBP	18.58	■□□□□ 0.56
COPS7B-222	ENST00000492423	PARP10	Q53GL7	1025 aa		18.58	■□□□□ 0.56
COPS7B-222	ENST00000492423	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.58	■□□□□ 0.56
COPS7B-222	ENST00000492423	DCTPP1	Q9H773	170 aa		18.58	■□□□□ 0.56
COPS7B-222	ENST00000492423	ZPR1	O75312	459 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	FOXO4	P98177	505 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	RTL5	Q5HYW3	569 aa	Predicted RBP	18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	SUSD4	Q5VX71	490 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	TBC1D9B	Q66K14	1250 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	SKAP1	Q86WV1	359 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	GCC1	Q96CN9	775 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	PLA2G12B	Q9BX93	195 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	PDZRN3	Q9UPQ7	1066 aa		18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.57	■□□□□ 0.56
COPS7B-222	ENST00000492423	NTSR2	O95665	410 aa		18.56	■□□□□ 0.56
COPS7B-222	ENST00000492423	RFC4	P35249	363 aa		18.56	■□□□□ 0.56
COPS7B-222	ENST00000492423	SF3B2	Q13435	895 aa	Known RBP	18.56	■□□□□ 0.56
COPS7B-222	ENST00000492423	DEFB132	Q7Z7B7	95 aa		18.56	■□□□□ 0.56
COPS7B-222	ENST00000492423	SYNE4	Q8N205	404 aa		18.56	■□□□□ 0.56
COPS7B-222	ENST00000492423	FAM89A	Q96GI7	184 aa		18.56	■□□□□ 0.56
COPS7B-222	ENST00000492423	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.56	■□□□□ 0.56
COPS7B-222	ENST00000492423	NRXN2	Q9P2S2	1712 aa		18.55	■□□□□ 0.56
COPS7B-222	ENST00000492423	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.55	■□□□□ 0.56
COPS7B-222	ENST00000492423	SRGAP3	O43295	1099 aa		18.55	■□□□□ 0.56
COPS7B-222	ENST00000492423	TRMT112	Q9UI30	125 aa	Known RBP	18.55	■□□□□ 0.56
COPS7B-222	ENST00000492423	SPEF2	Q9C093	1822 aa		18.55	■□□□□ 0.56
COPS7B-222	ENST00000492423	LRP5	O75197	1615 aa		18.54	■□□□□ 0.56
COPS7B-222	ENST00000492423	UTP14A	Q9BVJ6	771 aa	Known RBP	18.54	■□□□□ 0.56
COPS7B-222	ENST00000492423	PNPLA7	Q6ZV29	1317 aa		18.53	■□□□□ 0.56
COPS7B-222	ENST00000492423	GYS1	P13807	737 aa		18.53	■□□□□ 0.56
COPS7B-222	ENST00000492423	TFCP2L1	Q9NZI6	479 aa		18.53	■□□□□ 0.56
COPS7B-222	ENST00000492423	SH3TC1	Q8TE82	1336 aa		18.52	■□□□□ 0.56
COPS7B-222	ENST00000492423	RFX5	P48382	616 aa	Predicted RBP	18.52	■□□□□ 0.56
COPS7B-222	ENST00000492423	NUCB1	Q02818	461 aa		18.52	■□□□□ 0.56
COPS7B-222	ENST00000492423	LMBR1L	Q6UX01	489 aa		18.52	■□□□□ 0.56
COPS7B-222	ENST00000492423	COL23A1	Q86Y22	540 aa	Predicted RBP	18.52	■□□□□ 0.56
COPS7B-222	ENST00000492423	FAM177B	A6PVY3	158 aa		18.51	■□□□□ 0.55
COPS7B-222	ENST00000492423	IRS4	O14654	1257 aa	Predicted RBP	18.51	■□□□□ 0.55
COPS7B-222	ENST00000492423	BICDL1	Q6ZP65	573 aa		18.51	■□□□□ 0.55
COPS7B-222	ENST00000492423	EXOC6B	Q9Y2D4	811 aa		18.51	■□□□□ 0.55

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