RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 NUDT16Q96DE0 195 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 CCDC85AQ96PX6 553 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 PHOX2BQ99453 314 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 SPC25Q9HBM1 224 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 BSDC1Q9NW68 430 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 DDX56Q9NY93 547 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 TCEAL9Q9UHQ7 104 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 PRR36Q9H6K5 1346 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 LRRC7Q96NW7 1537 aa4.66□□□□□ -1.66
ATPAF1-206ENST00000492233 PLEKHG1Q9ULL1 1385 aa4.65□□□□□ -1.66
ATPAF1-206ENST00000492233 KIF20BQ96Q89 1820 aa4.65□□□□□ -1.66
ATPAF1-206ENST00000492233 EXOC5O00471 708 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 DNAJC6O75061 913 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 MAPK1P28482 360 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 GYS2P54840 703 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 TBX4P57082 545 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 GNAI1P63096 354 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 RBM10P98175 930 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 RBL2Q08999 1139 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 LMOD3Q0VAK6 560 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 SEMA3FQ13275 785 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 MLECQ14165 292 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 RINLQ6ZS11 566 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 NME9Q86XW9 330 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 AMOTL1Q8IY63 956 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 ARHGAP45Q92619 1136 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 COG3Q96JB2 828 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 OSBPL2Q9H1P3 480 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 ESF1Q9H501 851 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 JADE2Q9NQC1 790 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 GPHNQ9NQX3 736 aaPredicted RBP4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 ZBTB40Q9NUA8 1239 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 FBXO9Q9UK97 447 aaPredicted RBP4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 NOB1Q9ULX3 412 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 EMILIN1Q9Y6C2 1016 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 MRPL42Q9Y6G3 142 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 ROBO2Q9HCK4 1378 aa4.65□□□□□ -1.67
ATPAF1-206ENST00000492233 PTCH1Q13635 1447 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 CCDC189A1A4V9 331 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 ATP9BO43861 1147 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 VAMP4O75379 141 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 XPCQ01831 940 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 MRPL58Q14197 206 aaKnown RBP4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 MAMSTRQ6ZN01 415 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 ZSCAN29Q8IWY8 852 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 TMEM57Q8N5G2 664 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 MRPL50Q8N5N7 158 aaKnown RBP4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 SECISBP2LQ93073 1101 aaKnown RBP4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 MS4A4AQ96JQ5 239 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 SCYL1Q96KG9 808 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 GJD4Q96KN9 370 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 TGIF2Q9GZN2 237 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 CHMP4BQ9H444 224 aaKnown RBP4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 TTC21BQ7Z4L5 1316 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 KIF24Q5T7B8 1368 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 USP31Q70CQ4 1352 aa4.64□□□□□ -1.67
ATPAF1-206ENST00000492233 OVOS2A0A0J9YW53 1432 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 OVOS2Q6IE36 1432 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 SSH2Q76I76 1423 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ARHGAP23Q9P227 1491 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 TSPOAP1O95153 1857 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 NRKQ7Z2Y5 1582 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 PPP1R12AO14974 1030 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ZNF500O60304 480 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 GABBR2O75899 941 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 SEC24BO95487 1268 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ABL1P00519 1130 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 HMOX1P09601 288 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 FBLN1P23142 703 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 BDNFP23560 247 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ATP2B4P23634 1241 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 CALRP27797 417 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 SOX11P35716 441 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 MAP3K9P80192 1104 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 BECN1Q14457 450 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 NFKBIBQ15653 356 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ENOX2Q16206 610 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 METTL16Q86W50 562 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ITPRIPQ8IWB1 547 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 RPUSD2Q8IZ73 545 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ZNF579Q8NAF0 562 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 NLRP7Q8WX94 980 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 JDP2Q8WYK2 163 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 TSC1Q92574 1164 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 DDX12PQ92771 950 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 RNF34Q969K3 372 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 MRFAP1L1Q96HT8 127 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 PHACTR3Q96KR7 559 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 TBC1D32Q96NH3 1257 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ASB16Q96NS5 453 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 NAP1L4Q99733 375 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 SENP7Q9BQF6 1050 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 TSPYL2Q9H2G4 693 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ACBD3Q9H3P7 528 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 UPF2Q9HAU5 1272 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 GEMIN8Q9NWZ8 242 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 SLAIN2Q9P270 581 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 ZRANB1Q9UGI0 708 aa4.63□□□□□ -1.67
ATPAF1-206ENST00000492233 SWAP70Q9UH65 585 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms