RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 E9PSI1 815 aa22.79■■□□□ 1.24
LMNB1-206ENST00000492190 SLC4A2P04920 1241 aa22.79■■□□□ 1.24
LMNB1-206ENST00000492190 STK31Q9BXU1 1019 aa22.79■■□□□ 1.24
LMNB1-206ENST00000492190 ATP5J2-PTCD1G3V325 749 aa22.78■■□□□ 1.24
LMNB1-206ENST00000492190 SRGNP10124 158 aa22.78■■□□□ 1.24
LMNB1-206ENST00000492190 RIC1Q4ADV7 1423 aa22.78■■□□□ 1.24
LMNB1-206ENST00000492190 RIC3Q7Z5B4 369 aa22.78■■□□□ 1.24
LMNB1-206ENST00000492190 TRMT2AQ8IZ69 625 aaKnown RBP22.78■■□□□ 1.24
LMNB1-206ENST00000492190 SYNE4Q8N205 404 aa22.78■■□□□ 1.24
LMNB1-206ENST00000492190 PDZRN3Q9UPQ7 1066 aa22.78■■□□□ 1.24
LMNB1-206ENST00000492190 TAF1P21675 1872 aa22.77■■□□□ 1.24
LMNB1-206ENST00000492190 GTF2E1P29083 439 aaPredicted RBP22.77■■□□□ 1.24
LMNB1-206ENST00000492190 C3orf67Q6ZVT6 689 aa22.77■■□□□ 1.24
LMNB1-206ENST00000492190 PPP1R42Q7Z4L9 355 aa22.77■■□□□ 1.24
LMNB1-206ENST00000492190 TTLL6Q8N841 843 aa22.77■■□□□ 1.24
LMNB1-206ENST00000492190 ZNF622Q969S3 477 aaKnown RBP eCLIP22.77■■□□□ 1.24
LMNB1-206ENST00000492190 UTP14AQ9BVJ6 771 aaKnown RBP22.77■■□□□ 1.24
LMNB1-206ENST00000492190 ADCY9O60503 1353 aa22.76■■□□□ 1.23
LMNB1-206ENST00000492190 FER1L6Q2WGJ9 1857 aa22.76■■□□□ 1.23
LMNB1-206ENST00000492190 YY1P25490 414 aa22.75■■□□□ 1.23
LMNB1-206ENST00000492190 PI4KAP2A4QPH2 592 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 FLIIQ13045 1269 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 TRIM28Q13263 835 aaKnown RBP22.74■■□□□ 1.23
LMNB1-206ENST00000492190 SLC10A5Q5PT55 438 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 STYK1Q6J9G0 422 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 KSR2Q6VAB6 950 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 PI4KAP1Q8N8J0 262 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 MASTLQ96GX5 879 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 MYD88Q99836 296 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 MAP3K2Q9Y2U5 619 aa22.74■■□□□ 1.23
LMNB1-206ENST00000492190 CRY2Q49AN0 593 aa22.73■■□□□ 1.23
LMNB1-206ENST00000492190 ARHGAP27Q6ZUM4 889 aa22.73■■□□□ 1.23
LMNB1-206ENST00000492190 METTL22Q9BUU2 404 aaPredicted RBP22.73■■□□□ 1.23
LMNB1-206ENST00000492190 TRMT112Q9UI30 125 aaKnown RBP22.73■■□□□ 1.23
LMNB1-206ENST00000492190 DDX58O95786 925 aaKnown RBP22.72■■□□□ 1.23
LMNB1-206ENST00000492190 NPR1P16066 1061 aa22.72■■□□□ 1.23
LMNB1-206ENST00000492190 RNF123Q5XPI4 1314 aa22.72■■□□□ 1.23
LMNB1-206ENST00000492190 HCLS1P14317 486 aaPredicted RBP22.71■■□□□ 1.23
LMNB1-206ENST00000492190 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
LMNB1-206ENST00000492190 PRPF40BQ6NWY9 871 aaKnown RBP22.7■■□□□ 1.22
LMNB1-206ENST00000492190 CNKSR1Q969H4 720 aa22.7■■□□□ 1.22
LMNB1-206ENST00000492190 SH3TC1Q8TE82 1336 aa22.7■■□□□ 1.22
LMNB1-206ENST00000492190 IGKV5-2P06315 115 aa22.69■■□□□ 1.22
LMNB1-206ENST00000492190 FAM89AQ96GI7 184 aa22.69■■□□□ 1.22
LMNB1-206ENST00000492190 ZNF219Q9P2Y4 722 aaPredicted RBP22.69■■□□□ 1.22
LMNB1-206ENST00000492190 MYH3P11055 1940 aa22.69■■□□□ 1.22
LMNB1-206ENST00000492190 C21orf2O43822 256 aa22.68■■□□□ 1.22
LMNB1-206ENST00000492190 FKBP5Q13451 457 aaPredicted RBP22.68■■□□□ 1.22
LMNB1-206ENST00000492190 C7orf43Q8WVR3 580 aa22.68■■□□□ 1.22
LMNB1-206ENST00000492190 DICER1Q9UPY3 1922 aaKnown RBP22.68■■□□□ 1.22
LMNB1-206ENST00000492190 HOXA10P31260 410 aaPredicted RBP22.67■■□□□ 1.22
LMNB1-206ENST00000492190 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
LMNB1-206ENST00000492190 CCDC191Q8NCU4 936 aa22.67■■□□□ 1.22
LMNB1-206ENST00000492190 PRELPP51888 382 aa22.66■■□□□ 1.22
LMNB1-206ENST00000492190 RASSF7Q02833 373 aa22.66■■□□□ 1.22
LMNB1-206ENST00000492190 OLFM4Q6UX06 510 aa22.66■■□□□ 1.22
LMNB1-206ENST00000492190 MRPL50Q8N5N7 158 aaKnown RBP22.66■■□□□ 1.22
LMNB1-206ENST00000492190 JARID2Q92833 1246 aaPredicted RBP22.66■■□□□ 1.22
LMNB1-206ENST00000492190 NLRP3Q96P20 1036 aa22.66■■□□□ 1.22
LMNB1-206ENST00000492190 COL4A1P02462 1669 aa22.65■■□□□ 1.22
LMNB1-206ENST00000492190 NFKBIEO00221 500 aa22.65■■□□□ 1.22
LMNB1-206ENST00000492190 CWF19L2Q2TBE0 894 aaKnown RBP22.65■■□□□ 1.22
LMNB1-206ENST00000492190 SLC51AQ86UW1 340 aa22.65■■□□□ 1.22
LMNB1-206ENST00000492190 DNAAF4Q8WXU2 420 aa22.65■■□□□ 1.22
LMNB1-206ENST00000492190 SSH1Q8WYL5 1049 aa22.65■■□□□ 1.22
LMNB1-206ENST00000492190 CWC25Q9NXE8 425 aaPredicted RBP22.65■■□□□ 1.22
LMNB1-206ENST00000492190 F6X3S4 739 aa22.64■■□□□ 1.21
LMNB1-206ENST00000492190 ZBTB38Q8NAP3 1195 aaPredicted RBP22.64■■□□□ 1.21
LMNB1-206ENST00000492190 RPGRQ92834 1020 aaKnown RBP22.64■■□□□ 1.21
LMNB1-206ENST00000492190 NEURL1BA8MQ27 555 aa22.63■■□□□ 1.21
LMNB1-206ENST00000492190 PCCAP05165 728 aaPredicted RBP22.63■■□□□ 1.21
LMNB1-206ENST00000492190 ALDH1B1P30837 517 aa22.63■■□□□ 1.21
LMNB1-206ENST00000492190 CRAMP1Q96RY5 1269 aa22.63■■□□□ 1.21
LMNB1-206ENST00000492190 IRS4O14654 1257 aaPredicted RBP22.62■■□□□ 1.21
LMNB1-206ENST00000492190 NEXNQ0ZGT2 675 aa22.61■■□□□ 1.21
LMNB1-206ENST00000492190 ZNF784Q8NCA9 323 aaPredicted RBP22.61■■□□□ 1.21
LMNB1-206ENST00000492190 SNED1Q8TER0 1413 aa22.61■■□□□ 1.21
LMNB1-206ENST00000492190 RBM17Q96I25 401 aaKnown RBP22.61■■□□□ 1.21
LMNB1-206ENST00000492190 BCL2L13Q9BXK5 485 aa22.61■■□□□ 1.21
LMNB1-206ENST00000492190 ABCC4O15439 1325 aa22.6■■□□□ 1.21
LMNB1-206ENST00000492190 TIAM2Q8IVF5 1701 aa22.6■■□□□ 1.21
LMNB1-206ENST00000492190 C9orf131Q5VYM1 1079 aa22.6■■□□□ 1.21
LMNB1-206ENST00000492190 GCKRQ14397 625 aa22.59■■□□□ 1.21
LMNB1-206ENST00000492190 SF3B3Q15393 1217 aaKnown RBP22.59■■□□□ 1.21
LMNB1-206ENST00000492190 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
LMNB1-206ENST00000492190 LINS1Q8NG48 757 aa22.59■■□□□ 1.21
LMNB1-206ENST00000492190 CT47B1P0C2W7 299 aaPredicted RBP22.58■■□□□ 1.21
LMNB1-206ENST00000492190 ALDH1L2Q3SY69 923 aa22.58■■□□□ 1.21
LMNB1-206ENST00000492190 ZBED9Q6R2W3 1325 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 CDHR2Q9BYE9 1310 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 H7C1W4 665 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 CCDC93Q567U6 631 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 RNF181Q9P0P0 153 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 SPEF2Q9C093 1822 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
LMNB1-206ENST00000492190 CASP7P55210 303 aa22.56■■□□□ 1.2
LMNB1-206ENST00000492190 SOGA3Q5TF21 947 aa22.56■■□□□ 1.2
LMNB1-206ENST00000492190 PPEF1O14829 653 aaPredicted RBP22.55■■□□□ 1.2
LMNB1-206ENST00000492190 LMNB1P20700 586 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms