RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 PLBD2Q8NHP8 589 aa35.11■■■■□ 3.21
SH3GL3-204ENST00000492099 NMRK2Q9NPI5 230 aa35.11■■■■□ 3.21
SH3GL3-204ENST00000492099 RNF123Q5XPI4 1314 aa35.1■■■■□ 3.21
SH3GL3-204ENST00000492099 ANKRD13DQ6ZTN6 518 aa35.1■■■■□ 3.21
SH3GL3-204ENST00000492099 FER1L6Q2WGJ9 1857 aa35.09■■■■□ 3.21
SH3GL3-204ENST00000492099 SENP3-EIF4A1A0A087X0R7 540 aa35.09■■■■□ 3.21
SH3GL3-204ENST00000492099 ELL2O00472 640 aaPredicted RBP35.09■■■■□ 3.21
SH3GL3-204ENST00000492099 RPGRQ92834 1020 aaKnown RBP35.09■■■■□ 3.21
SH3GL3-204ENST00000492099 CACNA1SQ13698 1873 aa35.08■■■■□ 3.21
SH3GL3-204ENST00000492099 SLC10A5Q5PT55 438 aa35.08■■■■□ 3.21
SH3GL3-204ENST00000492099 NLRP10Q86W26 655 aa35.08■■■■□ 3.21
SH3GL3-204ENST00000492099 TNRC6CQ9HCJ0 1690 aaKnown RBP35.08■■■■□ 3.21
SH3GL3-204ENST00000492099 HOXA10P31260 410 aaPredicted RBP35.07■■■■□ 3.2
SH3GL3-204ENST00000492099 C8orf58Q8NAV2 365 aa35.07■■■■□ 3.2
SH3GL3-204ENST00000492099 NLRP3Q96P20 1036 aa35.07■■■■□ 3.2
SH3GL3-204ENST00000492099 GLTPD2A6NH11 291 aa35.05■■■■□ 3.2
SH3GL3-204ENST00000492099 TOMM70O94826 608 aa35.05■■■■□ 3.2
SH3GL3-204ENST00000492099 RTKN2Q8IZC4 609 aa35.05■■■■□ 3.2
SH3GL3-204ENST00000492099 RBM17Q96I25 401 aaKnown RBP35.05■■■■□ 3.2
SH3GL3-204ENST00000492099 IL16Q14005 1332 aa35.04■■■■□ 3.2
SH3GL3-204ENST00000492099 CRAMP1Q96RY5 1269 aa35.03■■■■□ 3.2
SH3GL3-204ENST00000492099 TRMT112Q9UI30 125 aaKnown RBP35.03■■■■□ 3.2
SH3GL3-204ENST00000492099 CCDC88AQ3V6T2 1871 aa35.03■■■■□ 3.2
SH3GL3-204ENST00000492099 ANKRD36CQ5JPF3 1778 aa35.02■■■■□ 3.2
SH3GL3-204ENST00000492099 FKBP4Q02790 459 aaKnown RBP eCLIP35.02■■■■□ 3.2
SH3GL3-204ENST00000492099 CCDC30Q5VVM6 783 aa35.02■■■■□ 3.2
SH3GL3-204ENST00000492099 DPY19L2Q6NUT2 758 aa35.01■■■■□ 3.2
SH3GL3-204ENST00000492099 C16orf71Q8IYS4 520 aaPredicted RBP35.01■■■■□ 3.2
SH3GL3-204ENST00000492099 TSR2Q969E8 191 aaKnown RBP35.01■■■■□ 3.2
SH3GL3-204ENST00000492099 RRAGCQ9HB90 399 aa35.01■■■■□ 3.2
SH3GL3-204ENST00000492099 CC2D2BQ6DHV5 1058 aa35■■■■□ 3.19
SH3GL3-204ENST00000492099 SH3TC1Q8TE82 1336 aa35■■■■□ 3.19
SH3GL3-204ENST00000492099 GOLGA2Q08379 1002 aa34.99■■■■□ 3.19
SH3GL3-204ENST00000492099 C3orf67Q6ZVT6 689 aa34.99■■■■□ 3.19
SH3GL3-204ENST00000492099 TSPYL6Q8N831 410 aa34.99■■■■□ 3.19
SH3GL3-204ENST00000492099 ISCA1Q9BUE6 129 aa34.99■■■■□ 3.19
SH3GL3-204ENST00000492099 TIAM2Q8IVF5 1701 aa34.98■■■■□ 3.19
SH3GL3-204ENST00000492099 OLFM4Q6UX06 510 aa34.98■■■■□ 3.19
SH3GL3-204ENST00000492099 RIC3Q7Z5B4 369 aa34.98■■■■□ 3.19
SH3GL3-204ENST00000492099 PHAXQ9H814 394 aaKnown RBP34.98■■■■□ 3.19
SH3GL3-204ENST00000492099 TRIM28Q13263 835 aaKnown RBP34.96■■■■□ 3.19
SH3GL3-204ENST00000492099 GRIPAP1Q4V328 841 aa34.96■■■■□ 3.19
SH3GL3-204ENST00000492099 WDR63Q8IWG1 891 aa34.96■■■■□ 3.19
SH3GL3-204ENST00000492099 FAM9BQ8IZU0 186 aa34.96■■■■□ 3.19
SH3GL3-204ENST00000492099 DICER1Q9UPY3 1922 aaKnown RBP34.96■■■■□ 3.19
SH3GL3-204ENST00000492099 HCLS1P14317 486 aaPredicted RBP34.95■■■■□ 3.19
SH3GL3-204ENST00000492099 RBM46Q8TBY0 533 aaKnown RBP34.95■■■■□ 3.19
SH3GL3-204ENST00000492099 ATP5J2-PTCD1G3V325 749 aa34.94■■■■□ 3.18
SH3GL3-204ENST00000492099 VEGFAP15692 232 aaPredicted RBP34.94■■■■□ 3.18
SH3GL3-204ENST00000492099 HSPA6P17066 643 aa34.94■■■■□ 3.18
SH3GL3-204ENST00000492099 SYNE4Q8N205 404 aa34.94■■■■□ 3.18
SH3GL3-204ENST00000492099 SALL2Q9Y467 1007 aaPredicted RBP34.94■■■■□ 3.18
SH3GL3-204ENST00000492099 PPEF1O14829 653 aaPredicted RBP34.93■■■■□ 3.18
SH3GL3-204ENST00000492099 PSMD1Q99460 953 aa34.93■■■■□ 3.18
SH3GL3-204ENST00000492099 ZNF277Q9NRM2 450 aaPredicted RBP34.93■■■■□ 3.18
SH3GL3-204ENST00000492099 DDX58O95786 925 aaKnown RBP34.92■■■■□ 3.18
SH3GL3-204ENST00000492099 TWISTNBQ3B726 338 aaPredicted RBP34.92■■■■□ 3.18
SH3GL3-204ENST00000492099 STK31Q9BXU1 1019 aa34.91■■■■□ 3.18
SH3GL3-204ENST00000492099 TMX4Q9H1E5 349 aaPredicted RBP34.91■■■■□ 3.18
SH3GL3-204ENST00000492099 SNED1Q8TER0 1413 aa34.89■■■■□ 3.18
SH3GL3-204ENST00000492099 IARSP41252 1262 aaKnown RBP34.89■■■■□ 3.18
SH3GL3-204ENST00000492099 FAM89AQ96GI7 184 aa34.89■■■■□ 3.18
SH3GL3-204ENST00000492099 ABCC4O15439 1325 aa34.88■■■■□ 3.17
SH3GL3-204ENST00000492099 BBOX1O75936 387 aa34.88■■■■□ 3.17
SH3GL3-204ENST00000492099 DDX46Q7L014 1031 aaKnown RBP34.88■■■■□ 3.17
SH3GL3-204ENST00000492099 FANCIQ9NVI1 1328 aa34.87■■■■□ 3.17
SH3GL3-204ENST00000492099 FSTL1Q12841 308 aa34.87■■■■□ 3.17
SH3GL3-204ENST00000492099 ZNF428Q96B54 188 aa34.87■■■■□ 3.17
SH3GL3-204ENST00000492099 ATP6V0A2Q9Y487 856 aa34.87■■■■□ 3.17
SH3GL3-204ENST00000492099 TCERG1O14776 1098 aaKnown RBP34.86■■■■□ 3.17
SH3GL3-204ENST00000492099 MYD88Q99836 296 aa34.86■■■■□ 3.17
SH3GL3-204ENST00000492099 DDNO94850 711 aaPredicted RBP34.84■■■■□ 3.17
SH3GL3-204ENST00000492099 CCDC191Q8NCU4 936 aa34.84■■■■□ 3.17
SH3GL3-204ENST00000492099 METTL22Q9BUU2 404 aaPredicted RBP34.84■■■■□ 3.17
SH3GL3-204ENST00000492099 WDR90Q96KV7 1748 aa34.84■■■■□ 3.17
SH3GL3-204ENST00000492099 POTECB2RU33 542 aa34.83■■■■□ 3.17
SH3GL3-204ENST00000492099 GRAPQ13588 217 aa34.83■■■■□ 3.17
SH3GL3-204ENST00000492099 ZBTB38Q8NAP3 1195 aaPredicted RBP34.83■■■■□ 3.17
SH3GL3-204ENST00000492099 GRAPLQ8TC17 118 aaPredicted RBP34.83■■■■□ 3.17
SH3GL3-204ENST00000492099 HSP90B1P14625 803 aaKnown RBP34.82■■■■□ 3.16
SH3GL3-204ENST00000492099 SF3B3Q15393 1217 aaKnown RBP34.82■■■■□ 3.16
SH3GL3-204ENST00000492099 KSR2Q6VAB6 950 aa34.82■■■■□ 3.16
SH3GL3-204ENST00000492099 JDP2Q8WYK2 163 aa34.82■■■■□ 3.16
SH3GL3-204ENST00000492099 IRS4O14654 1257 aaPredicted RBP34.81■■■■□ 3.16
SH3GL3-204ENST00000492099 SLC4A2P04920 1241 aa34.81■■■■□ 3.16
SH3GL3-204ENST00000492099 RTL5Q5HYW3 569 aaPredicted RBP34.81■■■■□ 3.16
SH3GL3-204ENST00000492099 SP8Q8IXZ3 490 aa34.81■■■■□ 3.16
SH3GL3-204ENST00000492099 SMC1BQ8NDV3 1235 aa34.81■■■■□ 3.16
SH3GL3-204ENST00000492099 MAP3K2Q9Y2U5 619 aa34.81■■■■□ 3.16
SH3GL3-204ENST00000492099 LAMB2P55268 1798 aa34.81■■■■□ 3.16
SH3GL3-204ENST00000492099 FZD9O00144 591 aa34.8■■■■□ 3.16
SH3GL3-204ENST00000492099 TMC4Q7Z404 712 aa34.8■■■■□ 3.16
SH3GL3-204ENST00000492099 PI4KAP2A4QPH2 592 aa34.79■■■■□ 3.16
SH3GL3-204ENST00000492099 APLP1P51693 650 aa34.79■■■■□ 3.16
SH3GL3-204ENST00000492099 PI4KAP1Q8N8J0 262 aa34.79■■■■□ 3.16
SH3GL3-204ENST00000492099 CWC25Q9NXE8 425 aaPredicted RBP34.79■■■■□ 3.16
SH3GL3-204ENST00000492099 VPS33BQ9H267 617 aa34.78■■■■□ 3.16
SH3GL3-204ENST00000492099 MYH16Q9H6N6 1097 aa34.78■■■■□ 3.16
SH3GL3-204ENST00000492099 VAMP4O75379 141 aa34.77■■■■□ 3.16
SH3GL3-204ENST00000492099 PCCAP05165 728 aaPredicted RBP34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms