RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
COL6A4P1-203ENST00000491915 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 POTECB2RU33 542 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 ATP5J2-PTCD1G3V325 749 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 ALDH1B1P30837 517 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 CCDC27Q2M243 656 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 CCDC88AQ3V6T2 1871 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 PLBD2Q8NHP8 589 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 ISCA1Q9BUE6 129 aa11.56□□□□□ -0.56
COL6A4P1-203ENST00000491915 GLTPD2A6NH11 291 aa11.55□□□□□ -0.56
COL6A4P1-203ENST00000491915 TCERG1O14776 1098 aaKnown RBP11.55□□□□□ -0.56
COL6A4P1-203ENST00000491915 FAM9BQ8IZU0 186 aa11.55□□□□□ -0.56
COL6A4P1-203ENST00000491915 TAOK3Q9H2K8 898 aa11.55□□□□□ -0.56
COL6A4P1-203ENST00000491915 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
COL6A4P1-203ENST00000491915 TOMM70O94826 608 aa11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 HSP90AB3PQ58FF7 597 aa11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 CRAMP1Q96RY5 1269 aa11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 SPINK5Q9NQ38 1064 aaPredicted RBP11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 ZNF277Q9NRM2 450 aaPredicted RBP11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 LTBP3Q9NS15 1303 aa11.54□□□□□ -0.56
COL6A4P1-203ENST00000491915 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 SOGA3Q5TF21 947 aa11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 JARID2Q92833 1246 aaPredicted RBP11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 KDM2BQ8NHM5 1336 aa11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
COL6A4P1-203ENST00000491915 DDNO94850 711 aaPredicted RBP11.52□□□□□ -0.57
COL6A4P1-203ENST00000491915 FKBP4Q02790 459 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL6A4P1-203ENST00000491915 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
COL6A4P1-203ENST00000491915 G2E3Q7L622 706 aa11.52□□□□□ -0.57
COL6A4P1-203ENST00000491915 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.57
COL6A4P1-203ENST00000491915 RTKN2Q8IZC4 609 aa11.52□□□□□ -0.57
COL6A4P1-203ENST00000491915 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
COL6A4P1-203ENST00000491915 VEGFAP15692 232 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 HSPA6P17066 643 aa11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 DPY19L2Q6NUT2 758 aa11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 WDR63Q8IWG1 891 aa11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 TNRC6CQ9HCJ0 1690 aaKnown RBP11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 IL16Q14005 1332 aa11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 SH3TC1Q8TE82 1336 aa11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
COL6A4P1-203ENST00000491915 VAMP4O75379 141 aa11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 TWISTNBQ3B726 338 aaPredicted RBP11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 RBM46Q8TBY0 533 aaKnown RBP11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 MYD88Q99836 296 aa11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 ATP6V0A2Q9Y487 856 aa11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 RIC1Q4ADV7 1423 aa11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 SNED1Q8TER0 1413 aa11.5□□□□□ -0.57
COL6A4P1-203ENST00000491915 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 BBOX1O75936 387 aa11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 IARSP41252 1262 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 SF3B3Q15393 1217 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 SP8Q8IXZ3 490 aa11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 PSMD1Q99460 953 aa11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 METTL22Q9BUU2 404 aaPredicted RBP11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 ABCC4O15439 1325 aa11.49□□□□□ -0.57
COL6A4P1-203ENST00000491915 PI4KAP2A4QPH2 592 aa11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 FZD9O00144 591 aa11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 IRS4O14654 1257 aaPredicted RBP11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 C16orf71Q8IYS4 520 aaPredicted RBP11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 PI4KAP1Q8N8J0 262 aa11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 MAP3K2Q9Y2U5 619 aa11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
COL6A4P1-203ENST00000491915 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 RNF123Q5XPI4 1314 aa11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 IGKV5-2P06315 115 aa11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 HTRA3P83110 453 aa11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 DDX46Q7L014 1031 aaKnown RBP11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 ZBTB38Q8NAP3 1195 aaPredicted RBP11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 CELF1Q92879 486 aaKnown RBP11.47□□□□□ -0.57
COL6A4P1-203ENST00000491915 TAF1P21675 1872 aa11.46□□□□□ -0.57
COL6A4P1-203ENST00000491915 ARFGEF2Q9Y6D5 1785 aa11.46□□□□□ -0.57
COL6A4P1-203ENST00000491915 FSTL1Q12841 308 aa11.46□□□□□ -0.57
COL6A4P1-203ENST00000491915 GRAPQ13588 217 aa11.46□□□□□ -0.57
COL6A4P1-203ENST00000491915 CCDC191Q8NCU4 936 aa11.46□□□□□ -0.57
COL6A4P1-203ENST00000491915 GRAPLQ8TC17 118 aaPredicted RBP11.46□□□□□ -0.57
COL6A4P1-203ENST00000491915 SEC31BQ9NQW1 1179 aa11.46□□□□□ -0.57
COL6A4P1-203ENST00000491915 COL4A5P29400 1685 aa11.46□□□□□ -0.58
COL6A4P1-203ENST00000491915 DDX58O95786 925 aaKnown RBP11.45□□□□□ -0.58
COL6A4P1-203ENST00000491915 PCCAP05165 728 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P1-203ENST00000491915 GRIPAP1Q4V328 841 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms