RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
HCLS1-210ENST00000491824 NLRP10Q86W26 655 aa21.14■□□□□ 0.97
HCLS1-210ENST00000491824 PHAXQ9H814 394 aaKnown RBP21.14■□□□□ 0.97
HCLS1-210ENST00000491824 ANKRD36CQ5JPF3 1778 aa21.14■□□□□ 0.97
HCLS1-210ENST00000491824 ANKRD31Q8N7Z5 1873 aa21.13■□□□□ 0.97
HCLS1-210ENST00000491824 ARFGEF1Q9Y6D6 1849 aa21.13■□□□□ 0.97
HCLS1-210ENST00000491824 SH3TC1Q8TE82 1336 aa21.13■□□□□ 0.97
HCLS1-210ENST00000491824 ALDH1B1P30837 517 aa21.13■□□□□ 0.97
HCLS1-210ENST00000491824 NLRP3Q96P20 1036 aa21.13■□□□□ 0.97
HCLS1-210ENST00000491824 ABCC12Q96J65 1359 aa21.11■□□□□ 0.97
HCLS1-210ENST00000491824 TCERG1O14776 1098 aaKnown RBP21.11■□□□□ 0.97
HCLS1-210ENST00000491824 PRPF40BQ6NWY9 871 aaKnown RBP21.11■□□□□ 0.97
HCLS1-210ENST00000491824 TMX4Q9H1E5 349 aaPredicted RBP21.11■□□□□ 0.97
HCLS1-210ENST00000491824 UTRNP46939 3433 aa21.1■□□□□ 0.97
HCLS1-210ENST00000491824 COL11A2P13942 1736 aaPredicted RBP21.1■□□□□ 0.97
HCLS1-210ENST00000491824 KLRG2A4D1S0 409 aaPredicted RBP21.1■□□□□ 0.97
HCLS1-210ENST00000491824 VAMP4O75379 141 aa21.1■□□□□ 0.97
HCLS1-210ENST00000491824 FKBP5Q13451 457 aaPredicted RBP21.1■□□□□ 0.97
HCLS1-210ENST00000491824 KSR2Q6VAB6 950 aa21.1■□□□□ 0.97
HCLS1-210ENST00000491824 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
HCLS1-210ENST00000491824 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
HCLS1-210ENST00000491824 MYD88Q99836 296 aa21.1■□□□□ 0.97
HCLS1-210ENST00000491824 SPINK5Q9NQ38 1064 aaPredicted RBP21.1■□□□□ 0.97
HCLS1-210ENST00000491824 ATP5J2-PTCD1G3V325 749 aa21.09■□□□□ 0.97
HCLS1-210ENST00000491824 FLIIQ13045 1269 aa21.09■□□□□ 0.97
HCLS1-210ENST00000491824 TRIM28Q13263 835 aaKnown RBP21.09■□□□□ 0.97
HCLS1-210ENST00000491824 ISCA1Q9BUE6 129 aa21.09■□□□□ 0.97
HCLS1-210ENST00000491824 MAP3K2Q9Y2U5 619 aa21.09■□□□□ 0.97
HCLS1-210ENST00000491824 ARFGEF2Q9Y6D5 1785 aa21.09■□□□□ 0.97
HCLS1-210ENST00000491824 CRY2Q49AN0 593 aa21.08■□□□□ 0.97
HCLS1-210ENST00000491824 CCDC191Q8NCU4 936 aa21.08■□□□□ 0.97
HCLS1-210ENST00000491824 METTL22Q9BUU2 404 aaPredicted RBP21.08■□□□□ 0.97
HCLS1-210ENST00000491824 CWC25Q9NXE8 425 aaPredicted RBP21.08■□□□□ 0.97
HCLS1-210ENST00000491824 ZNF219Q9P2Y4 722 aaPredicted RBP21.08■□□□□ 0.97
HCLS1-210ENST00000491824 PI4KAP2A4QPH2 592 aa21.07■□□□□ 0.96
HCLS1-210ENST00000491824 C21orf2O43822 256 aa21.07■□□□□ 0.96
HCLS1-210ENST00000491824 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
HCLS1-210ENST00000491824 PI4KAP1Q8N8J0 262 aa21.07■□□□□ 0.96
HCLS1-210ENST00000491824 SLFN5Q08AF3 891 aa21.06■□□□□ 0.96
HCLS1-210ENST00000491824 ZNF428Q96B54 188 aa21.06■□□□□ 0.96
HCLS1-210ENST00000491824 CCDC93Q567U6 631 aa21.05■□□□□ 0.96
HCLS1-210ENST00000491824 TNRC6CQ9HCJ0 1690 aaKnown RBP21.05■□□□□ 0.96
HCLS1-210ENST00000491824 HCLS1P14317 486 aaPredicted RBP21.04■□□□□ 0.96
HCLS1-210ENST00000491824 LMNB1P20700 586 aa21.04■□□□□ 0.96
HCLS1-210ENST00000491824 HOXA10P31260 410 aaPredicted RBP21.04■□□□□ 0.96
HCLS1-210ENST00000491824 C9orf131Q5VYM1 1079 aa21.04■□□□□ 0.96
HCLS1-210ENST00000491824 DDX46Q7L014 1031 aaKnown RBP21.04■□□□□ 0.96
HCLS1-210ENST00000491824 ZBTB38Q8NAP3 1195 aaPredicted RBP21.04■□□□□ 0.96
HCLS1-210ENST00000491824 ZNF784Q8NCA9 323 aaPredicted RBP21.04■□□□□ 0.96
HCLS1-210ENST00000491824 FAM89AQ96GI7 184 aa21.04■□□□□ 0.96
HCLS1-210ENST00000491824 CRAMP1Q96RY5 1269 aa21.04■□□□□ 0.96
HCLS1-210ENST00000491824 RNF181Q9P0P0 153 aa21.04■□□□□ 0.96
HCLS1-210ENST00000491824 CACNA1FO60840 1977 aa21.03■□□□□ 0.96
HCLS1-210ENST00000491824 GRIPAP1Q4V328 841 aa21.03■□□□□ 0.96
HCLS1-210ENST00000491824 CC2D2BQ6DHV5 1058 aa21.03■□□□□ 0.96
HCLS1-210ENST00000491824 RTKN2Q8IZC4 609 aa21.03■□□□□ 0.96
HCLS1-210ENST00000491824 TAOK3Q9H2K8 898 aa21.03■□□□□ 0.96
HCLS1-210ENST00000491824 ADCY9O60503 1353 aa21.02■□□□□ 0.96
HCLS1-210ENST00000491824 CT47B1P0C2W7 299 aaPredicted RBP21.02■□□□□ 0.96
HCLS1-210ENST00000491824 RTL5Q5HYW3 569 aaPredicted RBP21.02■□□□□ 0.96
HCLS1-210ENST00000491824 G2E3Q7L622 706 aa21.02■□□□□ 0.96
HCLS1-210ENST00000491824 DNAAF4Q8WXU2 420 aa21.02■□□□□ 0.96
HCLS1-210ENST00000491824 IRS4O14654 1257 aaPredicted RBP21.01■□□□□ 0.95
HCLS1-210ENST00000491824 PPEF1O14829 653 aaPredicted RBP21.01■□□□□ 0.95
HCLS1-210ENST00000491824 PCCAP05165 728 aaPredicted RBP21.01■□□□□ 0.95
HCLS1-210ENST00000491824 RASSF7Q02833 373 aa21.01■□□□□ 0.95
HCLS1-210ENST00000491824 CACNA1SQ13698 1873 aa21.01■□□□□ 0.95
HCLS1-210ENST00000491824 GPBP1L1Q9HC44 474 aaPredicted RBP21■□□□□ 0.95
HCLS1-210ENST00000491824 LTBP3Q9NS15 1303 aa21■□□□□ 0.95
HCLS1-210ENST00000491824 ZC3H4Q9UPT8 1303 aaKnown RBP21■□□□□ 0.95
HCLS1-210ENST00000491824 TMC4Q7Z404 712 aa20.99■□□□□ 0.95
HCLS1-210ENST00000491824 CDCA7LQ96GN5 454 aa20.99■□□□□ 0.95
HCLS1-210ENST00000491824 BBOX1O75936 387 aa20.98■□□□□ 0.95
HCLS1-210ENST00000491824 LINS1Q8NG48 757 aa20.98■□□□□ 0.95
HCLS1-210ENST00000491824 SLX4Q8IY92 1834 aa20.98■□□□□ 0.95
HCLS1-210ENST00000491824 NEURL1BA8MQ27 555 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 NFKBIEO00221 500 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 ALDH1L2Q3SY69 923 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 CCDC152Q4G0S7 254 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 C3orf67Q6ZVT6 689 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 SYNE4Q8N205 404 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 ZNF526Q8TF50 670 aaPredicted RBP20.97■□□□□ 0.95
HCLS1-210ENST00000491824 SMC4Q9NTJ3 1288 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 ABCC4O15439 1325 aa20.97■□□□□ 0.95
HCLS1-210ENST00000491824 PDE8AO60658 829 aa20.96■□□□□ 0.95
HCLS1-210ENST00000491824 FKBP4Q02790 459 aaKnown RBP eCLIP20.96■□□□□ 0.95
HCLS1-210ENST00000491824 GRAPQ13588 217 aa20.96■□□□□ 0.95
HCLS1-210ENST00000491824 CWF19L2Q2TBE0 894 aaKnown RBP20.96■□□□□ 0.95
HCLS1-210ENST00000491824 GRAPLQ8TC17 118 aaPredicted RBP20.96■□□□□ 0.95
HCLS1-210ENST00000491824 C7orf43Q8WVR3 580 aa20.96■□□□□ 0.95
HCLS1-210ENST00000491824 PTPRCP08575 1304 aa20.96■□□□□ 0.95
HCLS1-210ENST00000491824 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
HCLS1-210ENST00000491824 CDHR2Q9BYE9 1310 aa20.96■□□□□ 0.95
HCLS1-210ENST00000491824 IGKV5-2P06315 115 aa20.95■□□□□ 0.94
HCLS1-210ENST00000491824 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.94
HCLS1-210ENST00000491824 YTHDC1Q96MU7 727 aaKnown RBP20.95■□□□□ 0.94
HCLS1-210ENST00000491824 LAMB2P55268 1798 aa20.95■□□□□ 0.94
HCLS1-210ENST00000491824 SLC4A10Q6U841 1118 aa20.94■□□□□ 0.94
HCLS1-210ENST00000491824 ATP6V0A2Q9Y487 856 aa20.94■□□□□ 0.94
HCLS1-210ENST00000491824 GCKRQ14397 625 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms