RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TPTE2Q6XPS3 522 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 C2CD5Q86YS7 1000 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 ABCC12Q96J65 1359 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 NTSR2O95665 410 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 ERFEQ4G0M1 354 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 PIM2Q9P1W9 311 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 LAMB2P55268 1798 aa11.97□□□□□ -0.49
BRCA1-219ENST00000491747 NPHP1O15259 732 aa11.96□□□□□ -0.49
BRCA1-219ENST00000491747 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
BRCA1-219ENST00000491747 ST5P78524 1137 aa11.96□□□□□ -0.49
BRCA1-219ENST00000491747 SLX4Q8IY92 1834 aa11.96□□□□□ -0.5
BRCA1-219ENST00000491747 PDE6BP35913 854 aa11.96□□□□□ -0.5
BRCA1-219ENST00000491747 NLRP10Q86W26 655 aa11.96□□□□□ -0.5
BRCA1-219ENST00000491747 TRMT2AQ8IZ69 625 aaKnown RBP11.96□□□□□ -0.5
BRCA1-219ENST00000491747 SYNE4Q8N205 404 aa11.96□□□□□ -0.5
BRCA1-219ENST00000491747 DDX60Q8IY21 1712 aaKnown RBP11.95□□□□□ -0.5
BRCA1-219ENST00000491747 E9PSI1 815 aa11.95□□□□□ -0.5
BRCA1-219ENST00000491747 ATP5J2-PTCD1G3V325 749 aa11.95□□□□□ -0.5
BRCA1-219ENST00000491747 H0YIN7 160 aa11.95□□□□□ -0.5
BRCA1-219ENST00000491747 ISCA1Q9BUE6 129 aa11.95□□□□□ -0.5
BRCA1-219ENST00000491747 IBTKQ9P2D0 1353 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-219ENST00000491747 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 STK31Q9BXU1 1019 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 RCAN3Q9UKA8 241 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 ADCY9O60503 1353 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 KLRG2A4D1S0 409 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-219ENST00000491747 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 SRGNP10124 158 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
BRCA1-219ENST00000491747 GTF2E1P29083 439 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-219ENST00000491747 DALRD3Q5D0E6 543 aaKnown RBP11.93□□□□□ -0.5
BRCA1-219ENST00000491747 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
BRCA1-219ENST00000491747 PPP1R42Q7Z4L9 355 aa11.93□□□□□ -0.5
BRCA1-219ENST00000491747 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.55e-8■■■□□ 17.3
BRCA1-219ENST00000491747 UTP14AQ9BVJ6 771 aaKnown RBP11.93□□□□□ -0.5
BRCA1-219ENST00000491747 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
BRCA1-219ENST00000491747 MYD88Q99836 296 aa11.93□□□□□ -0.5
BRCA1-219ENST00000491747 MAP3K2Q9Y2U5 619 aa11.93□□□□□ -0.5
BRCA1-219ENST00000491747 PI4KAP2A4QPH2 592 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 KSR2Q6VAB6 950 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 TTLL6Q8N841 843 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 PI4KAP1Q8N8J0 262 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 SBF1O95248 1867 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 TAF1P21675 1872 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 FLIIQ13045 1269 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 METTL22Q9BUU2 404 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-219ENST00000491747 RIC1Q4ADV7 1423 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 CCDC88AQ3V6T2 1871 aa11.92□□□□□ -0.5
BRCA1-219ENST00000491747 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 STYK1Q6J9G0 422 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 TRMT112Q9UI30 125 aaKnown RBP11.91□□□□□ -0.5
BRCA1-219ENST00000491747 PDZRN3Q9UPQ7 1066 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 FER1L6Q2WGJ9 1857 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 DDX58O95786 925 aaKnown RBP11.91□□□□□ -0.5
BRCA1-219ENST00000491747 IGKV5-2P06315 115 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 MS4A1P11836 297 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 HCLS1P14317 486 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-219ENST00000491747 YY1P25490 414 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 TRIM28Q13263 835 aaKnown RBP11.91□□□□□ -0.5
BRCA1-219ENST00000491747 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
BRCA1-219ENST00000491747 FAM89AQ96GI7 184 aa11.9□□□□□ -0.5
BRCA1-219ENST00000491747 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-219ENST00000491747 NPR1P16066 1061 aa11.9□□□□□ -0.51
BRCA1-219ENST00000491747 JARID2Q92833 1246 aaPredicted RBP11.9□□□□□ -0.51
BRCA1-219ENST00000491747 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
BRCA1-219ENST00000491747 COL4A1P02462 1669 aa11.89□□□□□ -0.51
BRCA1-219ENST00000491747 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-219ENST00000491747 PRPF40BQ6NWY9 871 aaKnown RBP11.89□□□□□ -0.51
BRCA1-219ENST00000491747 SLC51AQ86UW1 340 aa11.89□□□□□ -0.51
BRCA1-219ENST00000491747 MRPL50Q8N5N7 158 aaKnown RBP11.89□□□□□ -0.51
BRCA1-219ENST00000491747 F6X3S4 739 aa11.89□□□□□ -0.51
BRCA1-219ENST00000491747 C21orf2O43822 256 aa11.89□□□□□ -0.51
BRCA1-219ENST00000491747 PRELPP51888 382 aa11.89□□□□□ -0.51
BRCA1-219ENST00000491747 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
BRCA1-219ENST00000491747 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
BRCA1-219ENST00000491747 OLFM4Q6UX06 510 aa11.88□□□□□ -0.51
BRCA1-219ENST00000491747 CCDC191Q8NCU4 936 aa11.88□□□□□ -0.51
BRCA1-219ENST00000491747 C7orf43Q8WVR3 580 aa11.88□□□□□ -0.51
BRCA1-219ENST00000491747 SSH1Q8WYL5 1049 aa11.88□□□□□ -0.51
BRCA1-219ENST00000491747 NLRP3Q96P20 1036 aa11.88□□□□□ -0.51
BRCA1-219ENST00000491747 PDE4AP27815 886 aa11.87□□□□□ -0.51
BRCA1-219ENST00000491747 HOXA10P31260 410 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-219ENST00000491747 RASSF7Q02833 373 aa11.87□□□□□ -0.51
BRCA1-219ENST00000491747 BCL2L13Q9BXK5 485 aa11.87□□□□□ -0.51
BRCA1-219ENST00000491747 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
BRCA1-219ENST00000491747 ZBTB38Q8NAP3 1195 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-219ENST00000491747 DNAAF4Q8WXU2 420 aa11.87□□□□□ -0.51
BRCA1-219ENST00000491747 BACH2Q9BYV9 841 aa11.87□□□□□ -0.51
BRCA1-219ENST00000491747 CWC25Q9NXE8 425 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-219ENST00000491747 NFKBIEO00221 500 aa11.86□□□□□ -0.51
BRCA1-219ENST00000491747 RPGRQ92834 1020 aaKnown RBP11.86□□□□□ -0.51
BRCA1-219ENST00000491747 MYH3P11055 1940 aa11.86□□□□□ -0.51
BRCA1-219ENST00000491747 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-219ENST00000491747 PCCAP05165 728 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms