RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 LMOD1P29536 600 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-206ENST00000491433 IARSP41252 1262 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-206ENST00000491433 PKN2Q16513 984 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-206ENST00000491433 GRIPAP1Q4V328 841 aa14.99□□□□□ -0.01
CLCNKA-206ENST00000491433 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-206ENST00000491433 ZNF277Q9NRM2 450 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-206ENST00000491433 EIF6P56537 245 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-206ENST00000491433 CC2D2BQ6DHV5 1058 aa14.98□□□□□ -0.01
CLCNKA-206ENST00000491433 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
CLCNKA-206ENST00000491433 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-206ENST00000491433 BTBD11A6QL63 1104 aa14.97□□□□□ -0.01
CLCNKA-206ENST00000491433 TRAF5O00463 557 aa14.97□□□□□ -0.01
CLCNKA-206ENST00000491433 SYNE4Q8N205 404 aa14.97□□□□□ -0.01
CLCNKA-206ENST00000491433 PSMD1Q99460 953 aa14.97□□□□□ -0.01
CLCNKA-206ENST00000491433 SZT2Q5T011 3432 aa14.97□□□□□ -0.01
CLCNKA-206ENST00000491433 GTF2E1P29083 439 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-206ENST00000491433 TRPM7Q96QT4 1865 aa14.96□□□□□ -0.01
CLCNKA-206ENST00000491433 CEMIPQ8WUJ3 1361 aa14.96□□□□□ -0.02
CLCNKA-206ENST00000491433 NIP7Q9Y221 180 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLCNKA-206ENST00000491433 TRIOBPQ9H2D6 2365 aa14.94□□□□□ -0.02
CLCNKA-206ENST00000491433 U2SURPO15042 1029 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-206ENST00000491433 CELF2O95319 508 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-206ENST00000491433 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-206ENST00000491433 USP50Q70EL3 339 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-206ENST00000491433 NYXQ9GZU5 481 aa14.94□□□□□ -0.02
CLCNKA-206ENST00000491433 USP16Q9Y5T5 823 aa14.93□□□□□ -0.02
CLCNKA-206ENST00000491433 TRPA1O75762 1119 aa14.92□□□□□ -0.02
CLCNKA-206ENST00000491433 GJA3Q9Y6H8 435 aa14.92□□□□□ -0.02
CLCNKA-206ENST00000491433 MKI67P46013 3256 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-206ENST00000491433 RTF1Q92541 710 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-206ENST00000491433 ZIC5Q96T25 663 aa14.91□□□□□ -0.02
CLCNKA-206ENST00000491433 TMX4Q9H1E5 349 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-206ENST00000491433 RNF186Q9NXI6 227 aa14.9□□□□□ -0.02
CLCNKA-206ENST00000491433 COL6A3P12111 3177 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 FAM177BA6PVY3 158 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 KCNQ3O43525 872 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 CC2D1BQ5T0F9 858 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 OLFM4Q6UX06 510 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 LARGE2Q8N3Y3 721 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 RPGRQ92834 1020 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 VPS33BQ9H267 617 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 COL3A1P02461 1466 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-206ENST00000491433 NPC1L1Q9UHC9 1359 aa14.88□□□□□ -0.03
CLCNKA-206ENST00000491433 PIP4K2AP48426 406 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-206ENST00000491433 NIM1KQ8IY84 436 aa14.88□□□□□ -0.03
CLCNKA-206ENST00000491433 CFAP53Q96M91 514 aa14.88□□□□□ -0.03
CLCNKA-206ENST00000491433 SNED1Q8TER0 1413 aa14.88□□□□□ -0.03
CLCNKA-206ENST00000491433 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
CLCNKA-206ENST00000491433 RIC1Q4ADV7 1423 aa14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 ERVV-1B6SEH8 477 aa14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 PER1O15534 1290 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 HOXA10P31260 410 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 EPS15P42566 896 aa14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 SCNN1DP51172 638 aa14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 RBM17Q96I25 401 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 ADARB2Q9NS39 739 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
CLCNKA-206ENST00000491433 IBTKQ9P2D0 1353 aaPredicted RBP14.86□□□□□ -0.03
CLCNKA-206ENST00000491433 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-206ENST00000491433 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
CLCNKA-206ENST00000491433 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
CLCNKA-206ENST00000491433 ZNF408Q9H9D4 720 aa14.86□□□□□ -0.03
CLCNKA-206ENST00000491433 LAMB4A4D0S4 1761 aa14.85□□□□□ -0.03
CLCNKA-206ENST00000491433 NUP98P52948 1817 aa14.85□□□□□ -0.03
CLCNKA-206ENST00000491433 NBPF26B4DH59 902 aa14.85□□□□□ -0.03
CLCNKA-206ENST00000491433 HUNKP57058 714 aa14.85□□□□□ -0.03
CLCNKA-206ENST00000491433 NBPF10Q6P3W6 841 aaKnown RBP14.85□□□□□ -0.03
CLCNKA-206ENST00000491433 FBXO46Q6PJ61 603 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-206ENST00000491433 SUPT20HQ8NEM7 779 aa14.85□□□□□ -0.03
CLCNKA-206ENST00000491433 PRAMEF22A3QJZ6 481 aa14.84□□□□□ -0.03
CLCNKA-206ENST00000491433 KIF23Q02241 960 aaPredicted RBP14.84□□□□□ -0.03
CLCNKA-206ENST00000491433 HLFQ16534 295 aa14.84□□□□□ -0.03
CLCNKA-206ENST00000491433 KIF6Q6ZMV9 814 aa14.84□□□□□ -0.03
CLCNKA-206ENST00000491433 RSPH6AQ9H0K4 717 aa14.84□□□□□ -0.03
CLCNKA-206ENST00000491433 GPRC5DQ9NZD1 345 aa14.84□□□□□ -0.03
CLCNKA-206ENST00000491433 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
CLCNKA-206ENST00000491433 PPEF1O14829 653 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-206ENST00000491433 PPIP5K2O43314 1243 aa14.83□□□□□ -0.04
CLCNKA-206ENST00000491433 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.04
CLCNKA-206ENST00000491433 CCDC102AQ96A19 550 aa14.83□□□□□ -0.04
CLCNKA-206ENST00000491433 PHACTR3Q96KR7 559 aa14.83□□□□□ -0.04
CLCNKA-206ENST00000491433 TAF7Q15545 349 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-206ENST00000491433 NUTM1Q86Y26 1132 aa14.82□□□□□ -0.04
CLCNKA-206ENST00000491433 PNISRQ8TF01 805 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-206ENST00000491433 MAP3K15Q6ZN16 1313 aa14.82□□□□□ -0.04
CLCNKA-206ENST00000491433 ABCC12Q96J65 1359 aa14.82□□□□□ -0.04
CLCNKA-206ENST00000491433 COL4A5P29400 1685 aa14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 FAM155AB1AL88 458 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 INTS3Q68E01 1043 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 RGMBQ6NW40 437 aa14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 MCM10Q7L590 875 aa14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 PPP1R42Q7Z4L9 355 aa14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 COL25A1Q9BXS0 654 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 GLIS2Q9BZE0 524 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 PGAP2Q9UHJ9 254 aa14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 ZNRF3Q9ULT6 936 aa14.81□□□□□ -0.04
CLCNKA-206ENST00000491433 CEP290O15078 2479 aa14.8□□□□□ -0.04
CLCNKA-206ENST00000491433 TNIP1Q15025 636 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms