RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 GCKRQ14397 625 aa27.37■■□□□ 1.97
VCPKMT-204ENST00000491402 BCL2L12Q9HB09 334 aa27.37■■□□□ 1.97
VCPKMT-204ENST00000491402 TRIM28Q13263 835 aaKnown RBP27.37■■□□□ 1.97
VCPKMT-204ENST00000491402 CCDC191Q8NCU4 936 aa27.37■■□□□ 1.97
VCPKMT-204ENST00000491402 GPTP24298 496 aa27.36■■□□□ 1.97
VCPKMT-204ENST00000491402 CWC25Q9NXE8 425 aaPredicted RBP27.36■■□□□ 1.97
VCPKMT-204ENST00000491402 ZNF34Q8IZ26 560 aa27.35■■□□□ 1.97
VCPKMT-204ENST00000491402 MTFR1LQ9H019 292 aa27.35■■□□□ 1.97
VCPKMT-204ENST00000491402 C9orf78Q9NZ63 289 aaPredicted RBP27.35■■□□□ 1.97
VCPKMT-204ENST00000491402 GRM8O00222 908 aa27.35■■□□□ 1.97
VCPKMT-204ENST00000491402 GNAI3P08754 354 aa27.35■■□□□ 1.97
VCPKMT-204ENST00000491402 NBPF7P0C2Y1 421 aaPredicted RBP27.35■■□□□ 1.97
VCPKMT-204ENST00000491402 UBN2Q6ZU65 1347 aa27.34■■□□□ 1.97
VCPKMT-204ENST00000491402 NLGN1Q8N2Q7 840 aa27.34■■□□□ 1.97
VCPKMT-204ENST00000491402 NLRP10Q86W26 655 aa27.33■■□□□ 1.97
VCPKMT-204ENST00000491402 UTYO14607 1347 aa27.33■■□□□ 1.97
VCPKMT-204ENST00000491402 UBTFL1P0CB47 393 aaPredicted RBP27.32■■□□□ 1.96
VCPKMT-204ENST00000491402 NIP7Q9Y221 180 aaKnown RBP eCLIP27.32■■□□□ 1.96
VCPKMT-204ENST00000491402 C1orf115Q9H7X2 142 aa27.32■■□□□ 1.96
VCPKMT-204ENST00000491402 TBC1D9BQ66K14 1250 aa27.31■■□□□ 1.96
VCPKMT-204ENST00000491402 BICDL1Q6ZP65 573 aa27.3■■□□□ 1.96
VCPKMT-204ENST00000491402 COL24A1Q17RW2 1714 aa27.3■■□□□ 1.96
VCPKMT-204ENST00000491402 PARP10Q53GL7 1025 aa27.3■■□□□ 1.96
VCPKMT-204ENST00000491402 UBE3BQ7Z3V4 1068 aa27.29■■□□□ 1.96
VCPKMT-204ENST00000491402 PPP4R2Q9NY27 417 aa27.29■■□□□ 1.96
VCPKMT-204ENST00000491402 GNAI2P04899 355 aa27.28■■□□□ 1.96
VCPKMT-204ENST00000491402 SPON1Q9HCB6 807 aa27.28■■□□□ 1.96
VCPKMT-204ENST00000491402 PCDHB15Q9Y5E8 787 aa27.28■■□□□ 1.96
VCPKMT-204ENST00000491402 H7C1W4 665 aa27.27■■□□□ 1.96
VCPKMT-204ENST00000491402 TM4SF1P30408 202 aa27.27■■□□□ 1.96
VCPKMT-204ENST00000491402 NFIXQ14938 502 aa27.27■■□□□ 1.96
VCPKMT-204ENST00000491402 MMP10P09238 476 aa27.27■■□□□ 1.96
VCPKMT-204ENST00000491402 CASP7P55210 303 aa27.27■■□□□ 1.96
VCPKMT-204ENST00000491402 JARID2Q92833 1246 aaPredicted RBP27.27■■□□□ 1.96
VCPKMT-204ENST00000491402 LRRFIP2Q9Y608 721 aaKnown RBP27.27■■□□□ 1.96
VCPKMT-204ENST00000491402 RTL5Q5HYW3 569 aaPredicted RBP27.26■■□□□ 1.95
VCPKMT-204ENST00000491402 SUSD4Q5VX71 490 aa27.26■■□□□ 1.95
VCPKMT-204ENST00000491402 ZBTB38Q8NAP3 1195 aaPredicted RBP27.26■■□□□ 1.95
VCPKMT-204ENST00000491402 SETDB2Q96T68 719 aa27.26■■□□□ 1.95
VCPKMT-204ENST00000491402 PCCAP05165 728 aaPredicted RBP27.25■■□□□ 1.95
VCPKMT-204ENST00000491402 PTGER2P43116 358 aa27.25■■□□□ 1.95
VCPKMT-204ENST00000491402 TRMT112Q9UI30 125 aaKnown RBP27.25■■□□□ 1.95
VCPKMT-204ENST00000491402 HDAC5Q9UQL6 1122 aa27.25■■□□□ 1.95
VCPKMT-204ENST00000491402 PPP1R42Q7Z4L9 355 aa27.25■■□□□ 1.95
VCPKMT-204ENST00000491402 FAM89AQ96GI7 184 aa27.25■■□□□ 1.95
VCPKMT-204ENST00000491402 SRCAPQ6ZRS2 3230 aa27.24■■□□□ 1.95
VCPKMT-204ENST00000491402 POLD1P28340 1107 aa27.24■■□□□ 1.95
VCPKMT-204ENST00000491402 DDR1Q08345 913 aa27.24■■□□□ 1.95
VCPKMT-204ENST00000491402 SUCLG2Q96I99 432 aa27.24■■□□□ 1.95
VCPKMT-204ENST00000491402 SGIP1Q9BQI5 828 aa27.24■■□□□ 1.95
VCPKMT-204ENST00000491402 UTP14AQ9BVJ6 771 aaKnown RBP27.24■■□□□ 1.95
VCPKMT-204ENST00000491402 FAM177BA6PVY3 158 aa27.22■■□□□ 1.95
VCPKMT-204ENST00000491402 NTSR2O95665 410 aa27.22■■□□□ 1.95
VCPKMT-204ENST00000491402 KAZALD1Q96I82 304 aa27.22■■□□□ 1.95
VCPKMT-204ENST00000491402 CCDC136Q96JN2 1154 aa27.22■■□□□ 1.95
VCPKMT-204ENST00000491402 CARMIL3Q8ND23 1372 aa27.22■■□□□ 1.95
VCPKMT-204ENST00000491402 CEP85Q6P2H3 762 aa27.22■■□□□ 1.95
VCPKMT-204ENST00000491402 PARP3Q9Y6F1 533 aa27.22■■□□□ 1.95
VCPKMT-204ENST00000491402 POLRMTO00411 1230 aaKnown RBP27.21■■□□□ 1.95
VCPKMT-204ENST00000491402 B4GALNT3Q6L9W6 998 aa27.21■■□□□ 1.95
VCPKMT-204ENST00000491402 SH3TC1Q8TE82 1336 aa27.21■■□□□ 1.95
VCPKMT-204ENST00000491402 CDHR2Q9BYE9 1310 aa27.21■■□□□ 1.95
VCPKMT-204ENST00000491402 SYNE4Q8N205 404 aa27.2■■□□□ 1.95
VCPKMT-204ENST00000491402 MYH3P11055 1940 aa27.2■■□□□ 1.94
VCPKMT-204ENST00000491402 BICC1Q9H694 974 aaKnown RBP27.2■■□□□ 1.94
VCPKMT-204ENST00000491402 LAMB2P55268 1798 aa27.19■■□□□ 1.94
VCPKMT-204ENST00000491402 DDX60Q8IY21 1712 aaKnown RBP27.19■■□□□ 1.94
VCPKMT-204ENST00000491402 SERPINB2P05120 415 aa27.19■■□□□ 1.94
VCPKMT-204ENST00000491402 SIRT2Q8IXJ6 389 aa27.19■■□□□ 1.94
VCPKMT-204ENST00000491402 RPAP2Q8IXW5 612 aaPredicted RBP27.19■■□□□ 1.94
VCPKMT-204ENST00000491402 ANKRD44Q8N8A2 993 aa27.19■■□□□ 1.94
VCPKMT-204ENST00000491402 EPHA10Q5JZY3 1008 aa27.18■■□□□ 1.94
VCPKMT-204ENST00000491402 NBPF5PQ86XG9 351 aaPredicted RBP27.18■■□□□ 1.94
VCPKMT-204ENST00000491402 NUTM1Q86Y26 1132 aa27.18■■□□□ 1.94
VCPKMT-204ENST00000491402 NYXQ9GZU5 481 aa27.18■■□□□ 1.94
VCPKMT-204ENST00000491402 IRS4O14654 1257 aaPredicted RBP27.17■■□□□ 1.94
VCPKMT-204ENST00000491402 PLA2G12BQ9BX93 195 aa27.17■■□□□ 1.94
VCPKMT-204ENST00000491402 FOXO4P98177 505 aa27.15■■□□□ 1.94
VCPKMT-204ENST00000491402 MTX1Q13505 466 aa27.15■■□□□ 1.94
VCPKMT-204ENST00000491402 HDAC1Q13547 482 aaPredicted RBP27.15■■□□□ 1.94
VCPKMT-204ENST00000491402 TPTE2Q6XPS3 522 aa27.15■■□□□ 1.94
VCPKMT-204ENST00000491402 PNMA6EA0A0J9YXQ4 647 aa27.14■■□□□ 1.94
VCPKMT-204ENST00000491402 ATP8B2P98198 1209 aa27.14■■□□□ 1.94
VCPKMT-204ENST00000491402 RABL6Q3YEC7 729 aaPredicted RBP27.14■■□□□ 1.94
VCPKMT-204ENST00000491402 IGHDP01880 384 aa27.14■■□□□ 1.93
VCPKMT-204ENST00000491402 ERFEQ4G0M1 354 aa27.14■■□□□ 1.93
VCPKMT-204ENST00000491402 CCDC24Q8N4L8 307 aa27.14■■□□□ 1.93
VCPKMT-204ENST00000491402 GTF2E1P29083 439 aaPredicted RBP27.13■■□□□ 1.93
VCPKMT-204ENST00000491402 RWDD1Q9H446 243 aaPredicted RBP27.13■■□□□ 1.93
VCPKMT-204ENST00000491402 NRXN2Q9P2S2 1712 aa27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 NPHP1O15259 732 aa27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 SRGAP3O43295 1099 aa27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 CNBD1Q8NA66 436 aa27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 PPP1R1BQ9UD71 204 aaPredicted RBP27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 ABCC12Q96J65 1359 aa27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 PDE8AO60658 829 aa27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 HCLS1P14317 486 aaPredicted RBP27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 PRR5LQ6MZQ0 368 aa27.12■■□□□ 1.93
VCPKMT-204ENST00000491402 HMMRO75330 724 aa27.11■■□□□ 1.93
VCPKMT-204ENST00000491402 HSP90B1P14625 803 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms