RNA–Protein interactions for RNA: ENST00000491385.1

TRIM34-202, Transcript of tripartite motif containing 34, humanhuman

TSL 1 (best)

Gene TRIM34, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM34-202ENST00000491385 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
TRIM34-202ENST00000491385 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
TRIM34-202ENST00000491385 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
TRIM34-202ENST00000491385 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
TRIM34-202ENST00000491385 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
TRIM34-202ENST00000491385 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
TRIM34-202ENST00000491385 H7C1W4 665 aa12.99□□□□□ -0.33
TRIM34-202ENST00000491385 ZPR1O75312 459 aa12.99□□□□□ -0.33
TRIM34-202ENST00000491385 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
TRIM34-202ENST00000491385 SSFA2P28290 1259 aa12.99□□□□□ -0.33
TRIM34-202ENST00000491385 RFC4P35249 363 aa12.99□□□□□ -0.33
TRIM34-202ENST00000491385 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
TRIM34-202ENST00000491385 NUP98P52948 1817 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 FAM177BA6PVY3 158 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 ANO8Q9HCE9 1232 aaPredicted RBP12.98□□□□□ -0.33
TRIM34-202ENST00000491385 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 HDAC5Q9UQL6 1122 aa12.98□□□□□ -0.33
TRIM34-202ENST00000491385 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRIM34-202ENST00000491385 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
TRIM34-202ENST00000491385 PARP10Q53GL7 1025 aa12.97□□□□□ -0.33
TRIM34-202ENST00000491385 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
TRIM34-202ENST00000491385 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
TRIM34-202ENST00000491385 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
TRIM34-202ENST00000491385 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
TRIM34-202ENST00000491385 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
TRIM34-202ENST00000491385 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
TRIM34-202ENST00000491385 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
TRIM34-202ENST00000491385 RGL2O15211 777 aa12.96□□□□□ -0.33
TRIM34-202ENST00000491385 HMMRO75330 724 aa12.96□□□□□ -0.33
TRIM34-202ENST00000491385 SKAP1Q86WV1 359 aa12.96□□□□□ -0.33
TRIM34-202ENST00000491385 SYNE4Q8N205 404 aa12.96□□□□□ -0.33
TRIM34-202ENST00000491385 TRMT112Q9UI30 125 aaKnown RBP12.96□□□□□ -0.33
TRIM34-202ENST00000491385 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
TRIM34-202ENST00000491385 SRGAP3O43295 1099 aa12.95□□□□□ -0.34
TRIM34-202ENST00000491385 NTSR2O95665 410 aa12.95□□□□□ -0.34
TRIM34-202ENST00000491385 COL23A1Q86Y22 540 aaPredicted RBP12.95□□□□□ -0.34
TRIM34-202ENST00000491385 CCDC125Q86Z20 511 aa12.95□□□□□ -0.34
TRIM34-202ENST00000491385 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
TRIM34-202ENST00000491385 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
TRIM34-202ENST00000491385 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 MSH5O43196 834 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 GYS1P13807 737 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 FOXO4P98177 505 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 MTX1Q13505 466 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 POLA2Q14181 598 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
TRIM34-202ENST00000491385 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
TRIM34-202ENST00000491385 SLC15A2Q16348 729 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
TRIM34-202ENST00000491385 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
TRIM34-202ENST00000491385 NFIXQ14938 502 aa12.92□□□□□ -0.34
TRIM34-202ENST00000491385 FLAD1Q8NFF5 587 aa12.92□□□□□ -0.34
TRIM34-202ENST00000491385 PLA2G12BQ9BX93 195 aa12.92□□□□□ -0.34
TRIM34-202ENST00000491385 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
TRIM34-202ENST00000491385 CHMP3Q9Y3E7 222 aa12.92□□□□□ -0.34
TRIM34-202ENST00000491385 APBB1O00213 710 aa12.91□□□□□ -0.34
TRIM34-202ENST00000491385 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
TRIM34-202ENST00000491385 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
TRIM34-202ENST00000491385 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
TRIM34-202ENST00000491385 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRIM34-202ENST00000491385 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
TRIM34-202ENST00000491385 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
TRIM34-202ENST00000491385 ABCC12Q96J65 1359 aa12.91□□□□□ -0.34
TRIM34-202ENST00000491385 PDE8AO60658 829 aa12.9□□□□□ -0.34
TRIM34-202ENST00000491385 SURF6O75683 361 aaKnown RBP12.9□□□□□ -0.34
TRIM34-202ENST00000491385 RFX5P48382 616 aaPredicted RBP12.9□□□□□ -0.34
TRIM34-202ENST00000491385 CTSWP56202 376 aa12.9□□□□□ -0.34
TRIM34-202ENST00000491385 NUCB1Q02818 461 aa12.9□□□□□ -0.34
TRIM34-202ENST00000491385 ANKRD45Q5TZF3 282 aa12.9□□□□□ -0.34
TRIM34-202ENST00000491385 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
TRIM34-202ENST00000491385 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
TRIM34-202ENST00000491385 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
TRIM34-202ENST00000491385 TM4SF1P30408 202 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 DDR1Q08345 913 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 LAMB2P55268 1798 aa12.89□□□□□ -0.35
TRIM34-202ENST00000491385 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
TRIM34-202ENST00000491385 SMARCA5O60264 1052 aaPredicted RBP12.88□□□□□ -0.35
TRIM34-202ENST00000491385 CSF1RP07333 972 aa12.88□□□□□ -0.35
TRIM34-202ENST00000491385 PDE4AP27815 886 aa12.88□□□□□ -0.35
TRIM34-202ENST00000491385 RGS3P49796 1198 aa12.88□□□□□ -0.35
TRIM34-202ENST00000491385 OS9Q13438 667 aaPredicted RBP12.88□□□□□ -0.35
TRIM34-202ENST00000491385 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms