RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CHMP7Q8WUX9 453 aaPredicted RBP9.38□□□□□ -0.91
PHC3-213ENST00000491258 UBE2OQ9C0C9 1292 aaKnown RBP9.38□□□□□ -0.91
PHC3-213ENST00000491258 TPSG1Q9NRR2 321 aa9.38□□□□□ -0.91
PHC3-213ENST00000491258 C21orf2O43822 256 aa9.37□□□□□ -0.91
PHC3-213ENST00000491258 TRAPPC3LQ5T215 181 aa9.37□□□□□ -0.91
PHC3-213ENST00000491258 SCG3Q8WXD2 468 aaKnown RBP9.37□□□□□ -0.91
PHC3-213ENST00000491258 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
PHC3-213ENST00000491258 LILRB5O75023 590 aa9.36□□□□□ -0.91
PHC3-213ENST00000491258 RASA1P20936 1047 aa9.36□□□□□ -0.91
PHC3-213ENST00000491258 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
PHC3-213ENST00000491258 BTLAQ7Z6A9 289 aa9.36□□□□□ -0.91
PHC3-213ENST00000491258 DKK1O94907 266 aa9.35□□□□□ -0.91
PHC3-213ENST00000491258 HIF1AQ16665 826 aa9.35□□□□□ -0.91
PHC3-213ENST00000491258 NKAPLQ5M9Q1 402 aa9.35□□□□□ -0.91
PHC3-213ENST00000491258 SEC13P55735 322 aa9.34□□□□□ -0.91
PHC3-213ENST00000491258 KRTAP4-12Q9BQ66 201 aa9.34□□□□□ -0.91
PHC3-213ENST00000491258 C2orf49Q9BVC5 232 aaPredicted RBP9.34□□□□□ -0.91
PHC3-213ENST00000491258 SLC6A14Q9UN76 642 aa9.34□□□□□ -0.91
PHC3-213ENST00000491258 STAG2Q8N3U4 1231 aa9.33□□□□□ -0.92
PHC3-213ENST00000491258 NUDT8Q8WV74 236 aa9.33□□□□□ -0.92
PHC3-213ENST00000491258 PNMA5Q96PV4 448 aa9.33□□□□□ -0.92
PHC3-213ENST00000491258 HINFPQ9BQA5 517 aa9.33□□□□□ -0.92
PHC3-213ENST00000491258 JPH1Q9HDC5 661 aaPredicted RBP9.33□□□□□ -0.92
PHC3-213ENST00000491258 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
PHC3-213ENST00000491258 SCO2A0A1W2PP80 73 aa9.32□□□□□ -0.92
PHC3-213ENST00000491258 DYRK3O43781 588 aa9.32□□□□□ -0.92
PHC3-213ENST00000491258 GAS2L2Q8NHY3 880 aa9.32□□□□□ -0.92
PHC3-213ENST00000491258 GLMNQ92990 594 aa9.32□□□□□ -0.92
PHC3-213ENST00000491258 C9orf172C9J069 976 aa9.31□□□□□ -0.92
PHC3-213ENST00000491258 LGR5O75473 907 aa9.31□□□□□ -0.92
PHC3-213ENST00000491258 LCE3BQ5TA77 95 aa9.31□□□□□ -0.92
PHC3-213ENST00000491258 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
PHC3-213ENST00000491258 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
PHC3-213ENST00000491258 DNAJB12Q9NXW2 375 aaKnown RBP9.31□□□□□ -0.92
PHC3-213ENST00000491258 MAFBQ9Y5Q3 323 aaPredicted RBP9.31□□□□□ -0.92
PHC3-213ENST00000491258 A0A0A0MRY4 1105 aa9.3□□□□□ -0.92
PHC3-213ENST00000491258 RAC1P63000 192 aa9.3□□□□□ -0.92
PHC3-213ENST00000491258 NFKB1P19838 968 aa9.29□□□□□ -0.92
PHC3-213ENST00000491258 RTN1Q16799 776 aa9.29□□□□□ -0.92
PHC3-213ENST00000491258 PSAPL1Q6NUJ1 521 aa9.29□□□□□ -0.92
PHC3-213ENST00000491258 GSX2Q9BZM3 304 aa9.29□□□□□ -0.92
PHC3-213ENST00000491258 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.29□□□□□ -0.92
PHC3-213ENST00000491258 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
PHC3-213ENST00000491258 ELNP15502 786 aa9.28□□□□□ -0.92
PHC3-213ENST00000491258 CCINQ13939 588 aa9.28□□□□□ -0.92
PHC3-213ENST00000491258 FOXD4L6Q3SYB3 417 aaPredicted RBP9.28□□□□□ -0.92
PHC3-213ENST00000491258 IER5Q5VY09 327 aa9.28□□□□□ -0.92
PHC3-213ENST00000491258 FOXD4L3Q6VB84 417 aaPredicted RBP9.28□□□□□ -0.92
PHC3-213ENST00000491258 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
PHC3-213ENST00000491258 EFCC1Q9HA90 598 aa9.28□□□□□ -0.92
PHC3-213ENST00000491258 SELPP16109 830 aa9.27□□□□□ -0.93
PHC3-213ENST00000491258 ADGRE1Q14246 886 aa9.27□□□□□ -0.93
PHC3-213ENST00000491258 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
PHC3-213ENST00000491258 NAGPAQ9UK23 515 aa9.27□□□□□ -0.93
PHC3-213ENST00000491258 RGS9O75916 674 aaPredicted RBP9.26□□□□□ -0.93
PHC3-213ENST00000491258 AFF1P51825 1210 aaKnown RBP9.26□□□□□ -0.93
PHC3-213ENST00000491258 DPYDQ12882 1025 aa9.26□□□□□ -0.93
PHC3-213ENST00000491258 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
PHC3-213ENST00000491258 PRSS36Q5K4E3 855 aa9.26□□□□□ -0.93
PHC3-213ENST00000491258 SHISA2Q6UWI4 295 aa9.26□□□□□ -0.93
PHC3-213ENST00000491258 DMRTC2Q8IXT2 367 aaPredicted RBP9.26□□□□□ -0.93
PHC3-213ENST00000491258 BCS1LQ9Y276 419 aa9.26□□□□□ -0.93
PHC3-213ENST00000491258 EPB42P16452 691 aa9.25□□□□□ -0.93
PHC3-213ENST00000491258 TXNRD3Q86VQ6 643 aa9.25□□□□□ -0.93
PHC3-213ENST00000491258 USP21Q9UK80 565 aa9.25□□□□□ -0.93
PHC3-213ENST00000491258 IGFBP4P22692 258 aa9.24□□□□□ -0.93
PHC3-213ENST00000491258 NRG1Q02297 640 aaPredicted RBP9.24□□□□□ -0.93
PHC3-213ENST00000491258 PTK7Q13308 1070 aa9.24□□□□□ -0.93
PHC3-213ENST00000491258 KRT25Q7Z3Z0 450 aa9.24□□□□□ -0.93
PHC3-213ENST00000491258 FAM35AQ86V20 835 aa9.24□□□□□ -0.93
PHC3-213ENST00000491258 LENG1Q96BZ8 264 aaPredicted RBP9.24□□□□□ -0.93
PHC3-213ENST00000491258 KLK14Q9P0G3 267 aa9.24□□□□□ -0.93
PHC3-213ENST00000491258 DMGDHQ9UI17 866 aaKnown RBP9.24□□□□□ -0.93
PHC3-213ENST00000491258 USP17L15C9J2P7 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L10C9JJH3 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L13C9JLJ4 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L12C9JPN9 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L11C9JVI0 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L21D6R901 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L18D6R9N7 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L22D6RA61 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L17D6RBQ6 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L19D6RCP7 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L20D6RJB6 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 CPB1P15086 417 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 IDH3AP50213 366 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 USP17L24Q0WX57 530 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
PHC3-213ENST00000491258 FNBP4Q8N3X1 1017 aaPredicted RBP9.23□□□□□ -0.93
PHC3-213ENST00000491258 CALR3Q96L12 384 aaKnown RBP9.23□□□□□ -0.93
PHC3-213ENST00000491258 PPP1R12CQ9BZL4 782 aa9.23□□□□□ -0.93
PHC3-213ENST00000491258 GRNP28799 593 aaKnown RBP9.21□□□□□ -0.94
PHC3-213ENST00000491258 DGKZQ13574 1117 aa9.21□□□□□ -0.94
PHC3-213ENST00000491258 PCSK7Q16549 785 aa9.21□□□□□ -0.94
PHC3-213ENST00000491258 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
PHC3-213ENST00000491258 TP53INP1Q96A56 240 aa9.21□□□□□ -0.94
PHC3-213ENST00000491258 H2AFB1P0C5Y9 115 aa9.2□□□□□ -0.94
PHC3-213ENST00000491258 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
PHC3-213ENST00000491258 INPP5BP32019 993 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms