RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 ILDR2Q71H61 639 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 TTC5Q8N0Z6 440 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 SMARCC1Q92922 1105 aaPredicted RBP11.02□□□□□ -0.65
CNOT4-210ENST00000491203 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 ITGB4P16144 1822 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 SBF2Q86WG5 1849 aa11.02□□□□□ -0.65
CNOT4-210ENST00000491203 CHL1O00533 1208 aa11.01□□□□□ -0.65
CNOT4-210ENST00000491203 SLC39A6Q13433 755 aa11.01□□□□□ -0.65
CNOT4-210ENST00000491203 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
CNOT4-210ENST00000491203 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
CNOT4-210ENST00000491203 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
CNOT4-210ENST00000491203 E9PSI1 815 aa11□□□□□ -0.65
CNOT4-210ENST00000491203 APBA3O96018 575 aa11□□□□□ -0.65
CNOT4-210ENST00000491203 ZNF853P0CG23 659 aa11□□□□□ -0.65
CNOT4-210ENST00000491203 ZNF790Q6PG37 636 aa11□□□□□ -0.65
CNOT4-210ENST00000491203 TATDN2Q93075 761 aa11□□□□□ -0.65
CNOT4-210ENST00000491203 MYH16Q9H6N6 1097 aa11□□□□□ -0.65
CNOT4-210ENST00000491203 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
CNOT4-210ENST00000491203 KCNQ3O43525 872 aa10.99□□□□□ -0.65
CNOT4-210ENST00000491203 ITGBL1O95965 494 aaPredicted RBP10.99□□□□□ -0.65
CNOT4-210ENST00000491203 CCDC125Q86Z20 511 aa10.99□□□□□ -0.65
CNOT4-210ENST00000491203 MBIPQ9NS73 344 aa10.99□□□□□ -0.65
CNOT4-210ENST00000491203 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
CNOT4-210ENST00000491203 BTAF1O14981 1849 aa10.99□□□□□ -0.65
CNOT4-210ENST00000491203 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
CNOT4-210ENST00000491203 PTCD1O75127 700 aaKnown RBP10.98□□□□□ -0.65
CNOT4-210ENST00000491203 SLFN5Q08AF3 891 aa10.98□□□□□ -0.65
CNOT4-210ENST00000491203 TSR2Q969E8 191 aaKnown RBP10.98□□□□□ -0.65
CNOT4-210ENST00000491203 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
CNOT4-210ENST00000491203 FMNL2Q96PY5 1086 aa10.98□□□□□ -0.65
CNOT4-210ENST00000491203 RBM27Q9P2N5 1060 aaKnown RBP10.98□□□□□ -0.65
CNOT4-210ENST00000491203 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
CNOT4-210ENST00000491203 FANCIQ9NVI1 1328 aa10.98□□□□□ -0.65
CNOT4-210ENST00000491203 BAG6P46379 1132 aa10.97□□□□□ -0.65
CNOT4-210ENST00000491203 EIF4A1P60842 406 aaKnown RBP10.97□□□□□ -0.65
CNOT4-210ENST00000491203 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
CNOT4-210ENST00000491203 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
CNOT4-210ENST00000491203 ZNF496Q96IT1 587 aaPredicted RBP10.97□□□□□ -0.65
CNOT4-210ENST00000491203 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
CNOT4-210ENST00000491203 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
CNOT4-210ENST00000491203 TNS1Q9HBL0 1735 aaKnown RBP10.97□□□□□ -0.65
CNOT4-210ENST00000491203 KDM3BQ7LBC6 1761 aa10.96□□□□□ -0.65
CNOT4-210ENST00000491203 KCPQ6ZWJ8 1503 aa10.96□□□□□ -0.65
CNOT4-210ENST00000491203 LOC102724428A0A0B4J2F2 783 aa10.96□□□□□ -0.65
CNOT4-210ENST00000491203 PLSCR1O15162 318 aa10.96□□□□□ -0.65
CNOT4-210ENST00000491203 SIK1P57059 783 aa10.96□□□□□ -0.65
CNOT4-210ENST00000491203 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
CNOT4-210ENST00000491203 TSR3Q9UJK0 312 aaKnown RBP10.96□□□□□ -0.65
CNOT4-210ENST00000491203 CCNL1Q9UK58 526 aaPredicted RBP10.96□□□□□ -0.65
CNOT4-210ENST00000491203 HEG1Q9ULI3 1381 aa10.95□□□□□ -0.66
CNOT4-210ENST00000491203 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
CNOT4-210ENST00000491203 SNRPA1P09661 255 aaKnown RBP10.95□□□□□ -0.66
CNOT4-210ENST00000491203 ATP6V1AP38606 617 aa10.95□□□□□ -0.66
CNOT4-210ENST00000491203 SLC27A3Q5K4L6 730 aa10.95□□□□□ -0.66
CNOT4-210ENST00000491203 EXOSC9Q06265 439 aaKnown RBP10.94□□□□□ -0.66
CNOT4-210ENST00000491203 TXNRD1Q16881 649 aa10.94□□□□□ -0.66
CNOT4-210ENST00000491203 KRT24Q2M2I5 525 aa10.94□□□□□ -0.66
CNOT4-210ENST00000491203 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
CNOT4-210ENST00000491203 DEFB132Q7Z7B7 95 aa10.94□□□□□ -0.66
CNOT4-210ENST00000491203 TRMT2AQ8IZ69 625 aaKnown RBP10.94□□□□□ -0.66
CNOT4-210ENST00000491203 TEX13AQ9BXU3 409 aaPredicted RBP10.94□□□□□ -0.66
CNOT4-210ENST00000491203 UBR2Q8IWV8 1755 aa10.94□□□□□ -0.66
CNOT4-210ENST00000491203 ELL2O00472 640 aaPredicted RBP10.93□□□□□ -0.66
CNOT4-210ENST00000491203 SEMA3EO15041 775 aa10.93□□□□□ -0.66
CNOT4-210ENST00000491203 GIGYF1O75420 1035 aaPredicted RBP10.93□□□□□ -0.66
CNOT4-210ENST00000491203 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
CNOT4-210ENST00000491203 EZH2Q15910 746 aaKnown RBP10.93□□□□□ -0.66
CNOT4-210ENST00000491203 NYAP1Q6ZVC0 841 aa10.93□□□□□ -0.66
CNOT4-210ENST00000491203 DNAJC10Q8IXB1 793 aa10.93□□□□□ -0.66
CNOT4-210ENST00000491203 C8orf58Q8NAV2 365 aa10.93□□□□□ -0.66
CNOT4-210ENST00000491203 SLC4A9Q96Q91 983 aa10.93□□□□□ -0.66
CNOT4-210ENST00000491203 CAMKK2Q96RR4 588 aa10.93□□□□□ -0.66
CNOT4-210ENST00000491203 LY75O60449 1722 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 EP400Q96L91 3159 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 SOS1Q07889 1333 aaPredicted RBP10.92□□□□□ -0.66
CNOT4-210ENST00000491203 STARD3NLO95772 234 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 HOXB7P09629 217 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 KCNQ4P56696 695 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 ITPK1Q13572 414 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 TWISTNBQ3B726 338 aaPredicted RBP10.92□□□□□ -0.66
CNOT4-210ENST00000491203 TSPYL6Q8N831 410 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 RGPD3A6NKT7 1758 aaPredicted RBP10.92□□□□□ -0.66
CNOT4-210ENST00000491203 RGPD4Q7Z3J3 1758 aa10.92□□□□□ -0.66
CNOT4-210ENST00000491203 PRAMEF22A3QJZ6 481 aa10.91□□□□□ -0.66
CNOT4-210ENST00000491203 EIF2S2P20042 333 aaKnown RBP10.91□□□□□ -0.66
CNOT4-210ENST00000491203 PTGDRQ13258 359 aa10.91□□□□□ -0.66
CNOT4-210ENST00000491203 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
CNOT4-210ENST00000491203 LRRC4BQ9NT99 713 aa10.91□□□□□ -0.66
CNOT4-210ENST00000491203 ZNF831Q5JPB2 1677 aa10.9□□□□□ -0.66
CNOT4-210ENST00000491203 CYP19A1P11511 503 aaPredicted RBP10.9□□□□□ -0.66
CNOT4-210ENST00000491203 HDGFL1Q5TGJ6 251 aa10.9□□□□□ -0.66
CNOT4-210ENST00000491203 LINC00116Q8NCU8 138 aa10.9□□□□□ -0.66
CNOT4-210ENST00000491203 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
CNOT4-210ENST00000491203 TJP1Q07157 1748 aa10.89□□□□□ -0.67
CNOT4-210ENST00000491203 CNTNAP4Q9C0A0 1308 aa10.89□□□□□ -0.67
CNOT4-210ENST00000491203 VAMP4O75379 141 aa10.89□□□□□ -0.67
CNOT4-210ENST00000491203 CT47B1P0C2W7 299 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms