RNA–Protein interactions for RNA: ENST00000491188.1

ZNF239-204, Transcript of zinc finger protein 239, humanhuman

TSL 2

Gene ZNF239, Length 701 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-204ENST00000491188 C7orf43Q8WVR3 580 aa18.57■□□□□ 0.56
ZNF239-204ENST00000491188 RNF123Q5XPI4 1314 aa18.56■□□□□ 0.56
ZNF239-204ENST00000491188 KIF3CO14782 793 aa18.56■□□□□ 0.56
ZNF239-204ENST00000491188 ALDH1B1P30837 517 aa18.56■□□□□ 0.56
ZNF239-204ENST00000491188 TCIRG1Q13488 830 aa18.56■□□□□ 0.56
ZNF239-204ENST00000491188 PLBD2Q8NHP8 589 aa18.56■□□□□ 0.56
ZNF239-204ENST00000491188 UTP14AQ9BVJ6 771 aaKnown RBP18.56■□□□□ 0.56
ZNF239-204ENST00000491188 IL16Q14005 1332 aa18.55■□□□□ 0.56
ZNF239-204ENST00000491188 DDX60Q8IY21 1712 aaKnown RBP18.55■□□□□ 0.56
ZNF239-204ENST00000491188 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
ZNF239-204ENST00000491188 ANKRD13DQ6ZTN6 518 aa18.55■□□□□ 0.56
ZNF239-204ENST00000491188 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
ZNF239-204ENST00000491188 CHMP4AQ9BY43 222 aa18.55■□□□□ 0.56
ZNF239-204ENST00000491188 TAOK3Q9H2K8 898 aa18.55■□□□□ 0.56
ZNF239-204ENST00000491188 TAF1P21675 1872 aa18.54■□□□□ 0.56
ZNF239-204ENST00000491188 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
ZNF239-204ENST00000491188 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
ZNF239-204ENST00000491188 HOXA10P31260 410 aaPredicted RBP18.54■□□□□ 0.56
ZNF239-204ENST00000491188 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
ZNF239-204ENST00000491188 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
ZNF239-204ENST00000491188 NLRP10Q86W26 655 aa18.54■□□□□ 0.56
ZNF239-204ENST00000491188 CEP350Q5VT06 3117 aa18.53■□□□□ 0.56
ZNF239-204ENST00000491188 RPGRQ92834 1020 aaKnown RBP18.53■□□□□ 0.56
ZNF239-204ENST00000491188 TSR2Q969E8 191 aaKnown RBP18.53■□□□□ 0.56
ZNF239-204ENST00000491188 NMRK2Q9NPI5 230 aa18.53■□□□□ 0.56
ZNF239-204ENST00000491188 CCDC30Q5VVM6 783 aa18.52■□□□□ 0.56
ZNF239-204ENST00000491188 NLRP3Q96P20 1036 aa18.52■□□□□ 0.56
ZNF239-204ENST00000491188 TSPYL6Q8N831 410 aa18.51■□□□□ 0.55
ZNF239-204ENST00000491188 CRAMP1Q96RY5 1269 aa18.51■□□□□ 0.55
ZNF239-204ENST00000491188 ISCA1Q9BUE6 129 aa18.51■□□□□ 0.55
ZNF239-204ENST00000491188 WDR90Q96KV7 1748 aa18.5■□□□□ 0.55
ZNF239-204ENST00000491188 C3orf67Q6ZVT6 689 aa18.5■□□□□ 0.55
ZNF239-204ENST00000491188 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
ZNF239-204ENST00000491188 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
ZNF239-204ENST00000491188 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
ZNF239-204ENST00000491188 RBM17Q96I25 401 aaKnown RBP18.5■□□□□ 0.55
ZNF239-204ENST00000491188 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
ZNF239-204ENST00000491188 SH3TC1Q8TE82 1336 aa18.49■□□□□ 0.55
ZNF239-204ENST00000491188 SNED1Q8TER0 1413 aa18.49■□□□□ 0.55
ZNF239-204ENST00000491188 GLTPD2A6NH11 291 aa18.49■□□□□ 0.55
ZNF239-204ENST00000491188 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
ZNF239-204ENST00000491188 GOLGA2Q08379 1002 aa18.49■□□□□ 0.55
ZNF239-204ENST00000491188 CC2D2BQ6DHV5 1058 aa18.49■□□□□ 0.55
ZNF239-204ENST00000491188 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
ZNF239-204ENST00000491188 MYH3P11055 1940 aa18.49■□□□□ 0.55
ZNF239-204ENST00000491188 TOMM70O94826 608 aa18.48■□□□□ 0.55
ZNF239-204ENST00000491188 TRIM28Q13263 835 aaKnown RBP18.48■□□□□ 0.55
ZNF239-204ENST00000491188 OLFM4Q6UX06 510 aa18.48■□□□□ 0.55
ZNF239-204ENST00000491188 RIC3Q7Z5B4 369 aa18.48■□□□□ 0.55
ZNF239-204ENST00000491188 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
ZNF239-204ENST00000491188 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
ZNF239-204ENST00000491188 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
ZNF239-204ENST00000491188 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
ZNF239-204ENST00000491188 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
ZNF239-204ENST00000491188 RRAGCQ9HB90 399 aa18.47■□□□□ 0.55
ZNF239-204ENST00000491188 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
ZNF239-204ENST00000491188 DDX58O95786 925 aaKnown RBP18.46■□□□□ 0.55
ZNF239-204ENST00000491188 GRIPAP1Q4V328 841 aa18.46■□□□□ 0.55
ZNF239-204ENST00000491188 DPY19L2Q6NUT2 758 aa18.46■□□□□ 0.55
ZNF239-204ENST00000491188 SCN4AP35499 1836 aa18.46■□□□□ 0.55
ZNF239-204ENST00000491188 PPEF1O14829 653 aaPredicted RBP18.45■□□□□ 0.54
ZNF239-204ENST00000491188 C16orf71Q8IYS4 520 aaPredicted RBP18.45■□□□□ 0.54
ZNF239-204ENST00000491188 PSMD1Q99460 953 aa18.45■□□□□ 0.54
ZNF239-204ENST00000491188 STK31Q9BXU1 1019 aa18.45■□□□□ 0.54
ZNF239-204ENST00000491188 RBM46Q8TBY0 533 aaKnown RBP18.44■□□□□ 0.54
ZNF239-204ENST00000491188 ZNF277Q9NRM2 450 aaPredicted RBP18.44■□□□□ 0.54
ZNF239-204ENST00000491188 ABCC4O15439 1325 aa18.44■□□□□ 0.54
ZNF239-204ENST00000491188 LRRC37AA6NMS7 1700 aa18.43■□□□□ 0.54
ZNF239-204ENST00000491188 VEGFAP15692 232 aaPredicted RBP18.43■□□□□ 0.54
ZNF239-204ENST00000491188 HSPA6P17066 643 aa18.43■□□□□ 0.54
ZNF239-204ENST00000491188 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
ZNF239-204ENST00000491188 CCDC191Q8NCU4 936 aa18.43■□□□□ 0.54
ZNF239-204ENST00000491188 ZNF428Q96B54 188 aa18.43■□□□□ 0.54
ZNF239-204ENST00000491188 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
ZNF239-204ENST00000491188 BBOX1O75936 387 aa18.42■□□□□ 0.54
ZNF239-204ENST00000491188 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
ZNF239-204ENST00000491188 MYD88Q99836 296 aa18.42■□□□□ 0.54
ZNF239-204ENST00000491188 METTL22Q9BUU2 404 aaPredicted RBP18.42■□□□□ 0.54
ZNF239-204ENST00000491188 ATP6V0A2Q9Y487 856 aa18.42■□□□□ 0.54
ZNF239-204ENST00000491188 KSR2Q6VAB6 950 aa18.41■□□□□ 0.54
ZNF239-204ENST00000491188 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
ZNF239-204ENST00000491188 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
ZNF239-204ENST00000491188 PI4KAP2A4QPH2 592 aa18.4■□□□□ 0.54
ZNF239-204ENST00000491188 IRS4O14654 1257 aaPredicted RBP18.4■□□□□ 0.54
ZNF239-204ENST00000491188 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
ZNF239-204ENST00000491188 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
ZNF239-204ENST00000491188 GRAPQ13588 217 aa18.4■□□□□ 0.54
ZNF239-204ENST00000491188 SF3B3Q15393 1217 aaKnown RBP18.4■□□□□ 0.54
ZNF239-204ENST00000491188 PI4KAP1Q8N8J0 262 aa18.4■□□□□ 0.54
ZNF239-204ENST00000491188 GRAPLQ8TC17 118 aaPredicted RBP18.4■□□□□ 0.54
ZNF239-204ENST00000491188 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
ZNF239-204ENST00000491188 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
ZNF239-204ENST00000491188 CWC25Q9NXE8 425 aaPredicted RBP18.4■□□□□ 0.54
ZNF239-204ENST00000491188 MAP3K2Q9Y2U5 619 aa18.4■□□□□ 0.54
ZNF239-204ENST00000491188 POTECB2RU33 542 aa18.39■□□□□ 0.53
ZNF239-204ENST00000491188 VAMP4O75379 141 aa18.39■□□□□ 0.53
ZNF239-204ENST00000491188 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
ZNF239-204ENST00000491188 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.53
ZNF239-204ENST00000491188 FSTL1Q12841 308 aa18.39■□□□□ 0.53
ZNF239-204ENST00000491188 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms