RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 MASTLQ96GX5 879 aa16.3■□□□□ 0.2
TMCO3-208ENST00000491166 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
TMCO3-208ENST00000491166 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
TMCO3-208ENST00000491166 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
TMCO3-208ENST00000491166 SUSD4Q5VX71 490 aa16.29■□□□□ 0.2
TMCO3-208ENST00000491166 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
TMCO3-208ENST00000491166 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
TMCO3-208ENST00000491166 BABAM1Q9NWV8 329 aa16.29■□□□□ 0.2
TMCO3-208ENST00000491166 SLX4Q8IY92 1834 aa16.29■□□□□ 0.2
TMCO3-208ENST00000491166 RGL2O15211 777 aa16.28■□□□□ 0.2
TMCO3-208ENST00000491166 NPR1P16066 1061 aa16.28■□□□□ 0.2
TMCO3-208ENST00000491166 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
TMCO3-208ENST00000491166 CACNA1SQ13698 1873 aa16.27■□□□□ 0.2
TMCO3-208ENST00000491166 GIGYF2Q6Y7W6 1299 aaKnown RBP16.27■□□□□ 0.2
TMCO3-208ENST00000491166 COPS6Q7L5N1 327 aa16.27■□□□□ 0.2
TMCO3-208ENST00000491166 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
TMCO3-208ENST00000491166 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
TMCO3-208ENST00000491166 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
TMCO3-208ENST00000491166 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
TMCO3-208ENST00000491166 ZNF34Q8IZ26 560 aa16.26■□□□□ 0.19
TMCO3-208ENST00000491166 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
TMCO3-208ENST00000491166 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
TMCO3-208ENST00000491166 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
TMCO3-208ENST00000491166 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
TMCO3-208ENST00000491166 PASKQ96RG2 1323 aa16.25■□□□□ 0.19
TMCO3-208ENST00000491166 NUP98P52948 1817 aa16.25■□□□□ 0.19
TMCO3-208ENST00000491166 TMEM88BA6NKF7 163 aa16.25■□□□□ 0.19
TMCO3-208ENST00000491166 NTSR2O95665 410 aa16.25■□□□□ 0.19
TMCO3-208ENST00000491166 HDGFL1Q5TGJ6 251 aa16.25■□□□□ 0.19
TMCO3-208ENST00000491166 C3orf67Q6ZVT6 689 aa16.25■□□□□ 0.19
TMCO3-208ENST00000491166 DUSP27Q5VZP5 1158 aa16.24■□□□□ 0.19
TMCO3-208ENST00000491166 C7orf43Q8WVR3 580 aa16.24■□□□□ 0.19
TMCO3-208ENST00000491166 DDX21Q9NR30 783 aaKnown RBP eCLIP16.24■□□□□ 0.19
TMCO3-208ENST00000491166 TNRC18O15417 2968 aaPredicted RBP16.23■□□□□ 0.19
TMCO3-208ENST00000491166 ELL2O00472 640 aaPredicted RBP16.23■□□□□ 0.19
TMCO3-208ENST00000491166 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
TMCO3-208ENST00000491166 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
TMCO3-208ENST00000491166 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
TMCO3-208ENST00000491166 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
TMCO3-208ENST00000491166 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
TMCO3-208ENST00000491166 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
TMCO3-208ENST00000491166 ZNF277Q9NRM2 450 aaPredicted RBP16.22■□□□□ 0.19
TMCO3-208ENST00000491166 FER1L6Q2WGJ9 1857 aa16.22■□□□□ 0.19
TMCO3-208ENST00000491166 LTBP3Q9NS15 1303 aa16.21■□□□□ 0.19
TMCO3-208ENST00000491166 ZNF853P0CG23 659 aa16.21■□□□□ 0.19
TMCO3-208ENST00000491166 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
TMCO3-208ENST00000491166 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
TMCO3-208ENST00000491166 PPP1R42Q7Z4L9 355 aa16.21■□□□□ 0.19
TMCO3-208ENST00000491166 UTP14AQ9BVJ6 771 aaKnown RBP16.21■□□□□ 0.19
TMCO3-208ENST00000491166 TSKSQ9UJT2 592 aa16.21■□□□□ 0.19
TMCO3-208ENST00000491166 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
TMCO3-208ENST00000491166 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
TMCO3-208ENST00000491166 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
TMCO3-208ENST00000491166 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
TMCO3-208ENST00000491166 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
TMCO3-208ENST00000491166 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
TMCO3-208ENST00000491166 IFT57Q9NWB7 429 aa16.2■□□□□ 0.18
TMCO3-208ENST00000491166 ARFGEF2Q9Y6D5 1785 aa16.2■□□□□ 0.18
TMCO3-208ENST00000491166 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
TMCO3-208ENST00000491166 ANP32CO43423 234 aa16.19■□□□□ 0.18
TMCO3-208ENST00000491166 HCLS1P14317 486 aaPredicted RBP16.19■□□□□ 0.18
TMCO3-208ENST00000491166 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
TMCO3-208ENST00000491166 EAPPQ56P03 285 aaPredicted RBP16.19■□□□□ 0.18
TMCO3-208ENST00000491166 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
TMCO3-208ENST00000491166 ATP5J2-PTCD1G3V325 749 aa16.18■□□□□ 0.18
TMCO3-208ENST00000491166 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
TMCO3-208ENST00000491166 HOXB7P09629 217 aa16.18■□□□□ 0.18
TMCO3-208ENST00000491166 GNAI1P63096 354 aa16.18■□□□□ 0.18
TMCO3-208ENST00000491166 GRM1Q13255 1194 aa16.18■□□□□ 0.18
TMCO3-208ENST00000491166 TCIRG1Q13488 830 aa16.18■□□□□ 0.18
TMCO3-208ENST00000491166 C8orf58Q8NAV2 365 aa16.18■□□□□ 0.18
TMCO3-208ENST00000491166 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
TMCO3-208ENST00000491166 DICER1Q9UPY3 1922 aaKnown RBP16.17■□□□□ 0.18
TMCO3-208ENST00000491166 RASSF10A6NK89 507 aa16.17■□□□□ 0.18
TMCO3-208ENST00000491166 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
TMCO3-208ENST00000491166 PAXIP1Q6ZW49 1069 aaPredicted RBP16.17■□□□□ 0.18
TMCO3-208ENST00000491166 PLBD2Q8NHP8 589 aa16.17■□□□□ 0.18
TMCO3-208ENST00000491166 TSR2Q969E8 191 aaKnown RBP16.17■□□□□ 0.18
TMCO3-208ENST00000491166 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
TMCO3-208ENST00000491166 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
TMCO3-208ENST00000491166 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
TMCO3-208ENST00000491166 ABT1Q9ULW3 272 aaKnown RBP16.17■□□□□ 0.18
TMCO3-208ENST00000491166 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
TMCO3-208ENST00000491166 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
TMCO3-208ENST00000491166 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
TMCO3-208ENST00000491166 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
TMCO3-208ENST00000491166 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
TMCO3-208ENST00000491166 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
TMCO3-208ENST00000491166 ANKRD13DQ6ZTN6 518 aa16.16■□□□□ 0.18
TMCO3-208ENST00000491166 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
TMCO3-208ENST00000491166 TSPYL6Q8N831 410 aa16.16■□□□□ 0.18
TMCO3-208ENST00000491166 BEGAINQ9BUH8 593 aa16.16■□□□□ 0.18
TMCO3-208ENST00000491166 MCOLN1Q9GZU1 580 aa16.16■□□□□ 0.18
TMCO3-208ENST00000491166 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
TMCO3-208ENST00000491166 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
TMCO3-208ENST00000491166 RIC1Q4ADV7 1423 aa16.16■□□□□ 0.18
TMCO3-208ENST00000491166 ZNF541Q9H0D2 1346 aa16.16■□□□□ 0.18
TMCO3-208ENST00000491166 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
TMCO3-208ENST00000491166 SNED1Q8TER0 1413 aa16.14■□□□□ 0.17
TMCO3-208ENST00000491166 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms