RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 RTL5Q5HYW3 569 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 NBPF5PQ86XG9 351 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 NUTM1Q86Y26 1132 aa13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 FTSJ3Q8IY81 847 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 PARP3Q9Y6F1 533 aa13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-227ENST00000491104 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
CACNA1C-227ENST00000491104 NTSR2O95665 410 aa13.63□□□□□ -0.23
CACNA1C-227ENST00000491104 POLD1P28340 1107 aa13.63□□□□□ -0.23
CACNA1C-227ENST00000491104 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
CACNA1C-227ENST00000491104 SPON1Q9HCB6 807 aa13.63□□□□□ -0.23
CACNA1C-227ENST00000491104 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-227ENST00000491104 LAMB2P55268 1798 aa13.63□□□□□ -0.23
CACNA1C-227ENST00000491104 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 CCT4P50991 539 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 TRIM28Q13263 835 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 GCKRQ14397 625 aa13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 ERFEQ4G0M1 354 aa13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 INTS3Q68E01 1043 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 PRR5LQ6MZQ0 368 aa13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 CCDC191Q8NCU4 936 aa13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 UTP14AQ9BVJ6 771 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 RNF123Q5XPI4 1314 aa13.62□□□□□ -0.23
CACNA1C-227ENST00000491104 NPHP1O15259 732 aa13.61□□□□□ -0.23
CACNA1C-227ENST00000491104 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
CACNA1C-227ENST00000491104 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
CACNA1C-227ENST00000491104 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
CACNA1C-227ENST00000491104 FAM89AQ96GI7 184 aa13.61□□□□□ -0.23
CACNA1C-227ENST00000491104 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
CACNA1C-227ENST00000491104 IBTKQ9P2D0 1353 aaPredicted RBP13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 KIF13BQ9NQT8 1826 aa13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 COL11A2P13942 1736 aaPredicted RBP13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 IRX6P78412 446 aaPredicted RBP13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 UBE3BQ7Z3V4 1068 aa13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 SH3TC1Q8TE82 1336 aa13.6□□□□□ -0.23
CACNA1C-227ENST00000491104 MYH3P11055 1940 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 C10orf71Q711Q0 1435 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 GRM8O00222 908 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 PCCAP05165 728 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 HCLS1P14317 486 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 CASP7P55210 303 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 C3orf67Q6ZVT6 689 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 ZBTB38Q8NAP3 1195 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 MEIS3Q99687 375 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 LRP5O75197 1615 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
CACNA1C-227ENST00000491104 H7C1W4 665 aa13.58□□□□□ -0.24
CACNA1C-227ENST00000491104 MS4A1P11836 297 aa13.58□□□□□ -0.24
CACNA1C-227ENST00000491104 ST5P78524 1137 aa13.58□□□□□ -0.24
CACNA1C-227ENST00000491104 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
CACNA1C-227ENST00000491104 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-227ENST00000491104 USP44Q9H0E7 712 aa13.58□□□□□ -0.24
CACNA1C-227ENST00000491104 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-227ENST00000491104 CACNA1SQ13698 1873 aa13.57□□□□□ -0.24
CACNA1C-227ENST00000491104 IRS4O14654 1257 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-227ENST00000491104 SUCLG2Q96I99 432 aa13.57□□□□□ -0.24
CACNA1C-227ENST00000491104 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
CACNA1C-227ENST00000491104 PPP1R1BQ9UD71 204 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-227ENST00000491104 CDHR2Q9BYE9 1310 aa13.57□□□□□ -0.24
CACNA1C-227ENST00000491104 TAF1P21675 1872 aa13.57□□□□□ -0.24
CACNA1C-227ENST00000491104 EPHA10Q5JZY3 1008 aa13.56□□□□□ -0.24
CACNA1C-227ENST00000491104 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
CACNA1C-227ENST00000491104 UTYO14607 1347 aa13.56□□□□□ -0.24
CACNA1C-227ENST00000491104 UBTFL1P0CB47 393 aaPredicted RBP13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 KAZALD1Q96I82 304 aa13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 CCDC85AQ96PX6 553 aaPredicted RBP13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 LRRFIP2Q9Y608 721 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 COL4A1P02462 1669 aa13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 DLEC1Q9Y238 1755 aa13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 SPEF2Q9C093 1822 aa13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 RIC1Q4ADV7 1423 aa13.55□□□□□ -0.24
CACNA1C-227ENST00000491104 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-227ENST00000491104 CHRNA5P30532 468 aa13.54□□□□□ -0.24
CACNA1C-227ENST00000491104 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
CACNA1C-227ENST00000491104 PDE8AO60658 829 aa13.53□□□□□ -0.24
CACNA1C-227ENST00000491104 C2CD5Q86YS7 1000 aa13.53□□□□□ -0.24
CACNA1C-227ENST00000491104 NLGN2Q8NFZ4 835 aa13.53□□□□□ -0.24
CACNA1C-227ENST00000491104 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
CACNA1C-227ENST00000491104 FHDC1Q9C0D6 1143 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-227ENST00000491104 WWC3Q9ULE0 1092 aa13.53□□□□□ -0.24
CACNA1C-227ENST00000491104 DDX19BQ9UMR2 479 aa13.53□□□□□ -0.24
CACNA1C-227ENST00000491104 GNAI3P08754 354 aa13.52□□□□□ -0.25
CACNA1C-227ENST00000491104 DPEP1P16444 411 aa13.52□□□□□ -0.25
CACNA1C-227ENST00000491104 CTSWP56202 376 aa13.52□□□□□ -0.25
CACNA1C-227ENST00000491104 FOXO4P98177 505 aa13.52□□□□□ -0.25
CACNA1C-227ENST00000491104 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.25
CACNA1C-227ENST00000491104 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
CACNA1C-227ENST00000491104 NLRP3Q96P20 1036 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms