RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 ADCY9O60503 1353 aa16.41■□□□□ 0.22
LIMK1-207ENST00000491052 H0YIN7 160 aa16.41■□□□□ 0.22
LIMK1-207ENST00000491052 NTSR2O95665 410 aa16.41■□□□□ 0.22
LIMK1-207ENST00000491052 FKBP5Q13451 457 aaPredicted RBP16.41■□□□□ 0.22
LIMK1-207ENST00000491052 KSR2Q6VAB6 950 aa16.41■□□□□ 0.22
LIMK1-207ENST00000491052 NLRP10Q86W26 655 aa16.41■□□□□ 0.22
LIMK1-207ENST00000491052 MYD88Q99836 296 aa16.41■□□□□ 0.22
LIMK1-207ENST00000491052 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
LIMK1-207ENST00000491052 PI4KAP2A4QPH2 592 aa16.4■□□□□ 0.22
LIMK1-207ENST00000491052 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
LIMK1-207ENST00000491052 ERFEQ4G0M1 354 aa16.4■□□□□ 0.22
LIMK1-207ENST00000491052 PI4KAP1Q8N8J0 262 aa16.4■□□□□ 0.22
LIMK1-207ENST00000491052 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
LIMK1-207ENST00000491052 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
LIMK1-207ENST00000491052 BCS1LQ9Y276 419 aa16.4■□□□□ 0.22
LIMK1-207ENST00000491052 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
LIMK1-207ENST00000491052 KCNA3P22001 575 aa16.39■□□□□ 0.21
LIMK1-207ENST00000491052 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
LIMK1-207ENST00000491052 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
LIMK1-207ENST00000491052 SBF1O95248 1867 aa16.38■□□□□ 0.21
LIMK1-207ENST00000491052 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
LIMK1-207ENST00000491052 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.21
LIMK1-207ENST00000491052 BCL2L13Q9BXK5 485 aa16.38■□□□□ 0.21
LIMK1-207ENST00000491052 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
LIMK1-207ENST00000491052 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
LIMK1-207ENST00000491052 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
LIMK1-207ENST00000491052 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
LIMK1-207ENST00000491052 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
LIMK1-207ENST00000491052 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
LIMK1-207ENST00000491052 SPEF2Q9C093 1822 aa16.37■□□□□ 0.21
LIMK1-207ENST00000491052 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
LIMK1-207ENST00000491052 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
LIMK1-207ENST00000491052 TRIM28Q13263 835 aaKnown RBP16.36■□□□□ 0.21
LIMK1-207ENST00000491052 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
LIMK1-207ENST00000491052 DNAAF4Q8WXU2 420 aa16.36■□□□□ 0.21
LIMK1-207ENST00000491052 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
LIMK1-207ENST00000491052 SRGNP10124 158 aa16.35■□□□□ 0.21
LIMK1-207ENST00000491052 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
LIMK1-207ENST00000491052 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
LIMK1-207ENST00000491052 CCDC191Q8NCU4 936 aa16.35■□□□□ 0.21
LIMK1-207ENST00000491052 CWC25Q9NXE8 425 aaPredicted RBP16.35■□□□□ 0.21
LIMK1-207ENST00000491052 F6X3S4 739 aa16.34■□□□□ 0.21
LIMK1-207ENST00000491052 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
LIMK1-207ENST00000491052 NPR1P16066 1061 aa16.34■□□□□ 0.21
LIMK1-207ENST00000491052 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
LIMK1-207ENST00000491052 STYK1Q6J9G0 422 aa16.34■□□□□ 0.21
LIMK1-207ENST00000491052 TTLL6Q8N841 843 aa16.34■□□□□ 0.21
LIMK1-207ENST00000491052 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
LIMK1-207ENST00000491052 FAM89AQ96GI7 184 aa16.34■□□□□ 0.21
LIMK1-207ENST00000491052 MASTLQ96GX5 879 aa16.34■□□□□ 0.21
LIMK1-207ENST00000491052 KLRG2A4D1S0 409 aaPredicted RBP16.33■□□□□ 0.2
LIMK1-207ENST00000491052 IGKV5-2P06315 115 aa16.33■□□□□ 0.2
LIMK1-207ENST00000491052 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
LIMK1-207ENST00000491052 CNKSR1Q969H4 720 aa16.33■□□□□ 0.2
LIMK1-207ENST00000491052 NLRP3Q96P20 1036 aa16.33■□□□□ 0.2
LIMK1-207ENST00000491052 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.2
LIMK1-207ENST00000491052 NEURL1BA8MQ27 555 aa16.32■□□□□ 0.2
LIMK1-207ENST00000491052 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
LIMK1-207ENST00000491052 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
LIMK1-207ENST00000491052 C3orf67Q6ZVT6 689 aa16.32■□□□□ 0.2
LIMK1-207ENST00000491052 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
LIMK1-207ENST00000491052 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
LIMK1-207ENST00000491052 PTPRCP08575 1304 aa16.31■□□□□ 0.2
LIMK1-207ENST00000491052 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
LIMK1-207ENST00000491052 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
LIMK1-207ENST00000491052 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
LIMK1-207ENST00000491052 LINS1Q8NG48 757 aa16.31■□□□□ 0.2
LIMK1-207ENST00000491052 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
LIMK1-207ENST00000491052 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
LIMK1-207ENST00000491052 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
LIMK1-207ENST00000491052 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
LIMK1-207ENST00000491052 TIAM2Q8IVF5 1701 aa16.3■□□□□ 0.2
LIMK1-207ENST00000491052 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
LIMK1-207ENST00000491052 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
LIMK1-207ENST00000491052 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
LIMK1-207ENST00000491052 KIF16BQ96L93 1317 aa16.28■□□□□ 0.2
LIMK1-207ENST00000491052 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
LIMK1-207ENST00000491052 ALDH1B1P30837 517 aa16.28■□□□□ 0.2
LIMK1-207ENST00000491052 GCKRQ14397 625 aa16.28■□□□□ 0.2
LIMK1-207ENST00000491052 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
LIMK1-207ENST00000491052 UBE3BQ7Z3V4 1068 aa16.28■□□□□ 0.2
LIMK1-207ENST00000491052 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
LIMK1-207ENST00000491052 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
LIMK1-207ENST00000491052 C21orf2O43822 256 aa16.27■□□□□ 0.2
LIMK1-207ENST00000491052 HOXA10P31260 410 aaPredicted RBP16.27■□□□□ 0.2
LIMK1-207ENST00000491052 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.2
LIMK1-207ENST00000491052 NOB1Q9ULX3 412 aaKnown RBP16.27■□□□□ 0.2
LIMK1-207ENST00000491052 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
LIMK1-207ENST00000491052 CRAMP1Q96RY5 1269 aa16.26■□□□□ 0.19
LIMK1-207ENST00000491052 COL4A1P02462 1669 aa16.26■□□□□ 0.19
LIMK1-207ENST00000491052 ABCC4O15439 1325 aa16.25■□□□□ 0.19
LIMK1-207ENST00000491052 PDE8AO60658 829 aa16.25■□□□□ 0.19
LIMK1-207ENST00000491052 ALDH1L1O75891 902 aa16.25■□□□□ 0.19
LIMK1-207ENST00000491052 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
LIMK1-207ENST00000491052 H7C1W4 665 aa16.24■□□□□ 0.19
LIMK1-207ENST00000491052 PPEF1O14829 653 aaPredicted RBP16.24■□□□□ 0.19
LIMK1-207ENST00000491052 BCAR3O75815 825 aa16.24■□□□□ 0.19
LIMK1-207ENST00000491052 YY1P25490 414 aa16.24■□□□□ 0.19
LIMK1-207ENST00000491052 RASSF7Q02833 373 aa16.24■□□□□ 0.19
LIMK1-207ENST00000491052 SF3B3Q15393 1217 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms