RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 WEE1P30291 646 aa12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 TMEM214Q6NUQ4 689 aaKnown RBP12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 SLAIN2Q9P270 581 aa12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 DACH1Q9UI36 760 aa12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 MBD5Q9P267 1494 aa12.07□□□□□ -0.48
FNDC3B-211ENST00000490832 LGR5O75473 907 aa12.06□□□□□ -0.48
FNDC3B-211ENST00000490832 NCOA2Q15596 1464 aa12.06□□□□□ -0.48
FNDC3B-211ENST00000490832 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
FNDC3B-211ENST00000490832 OCLNQ16625 522 aa12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 RHBDD1Q8TEB9 315 aa12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 SCG3Q8WXD2 468 aaKnown RBP12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 PRIMPOLQ96LW4 560 aa12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 SENP2Q9HC62 589 aa12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
FNDC3B-211ENST00000490832 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 NCOA1Q15788 1441 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 ADGBQ8N7X0 1667 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 CAMSAP2Q08AD1 1489 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 PSMA6P60900 246 aaKnown RBP12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 LYSMD3Q7Z3D4 306 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 KIFC2Q96AC6 838 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 USP3Q9Y6I4 520 aa12.04□□□□□ -0.48
FNDC3B-211ENST00000490832 SPATA31C2B4DYI2 1134 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 FOXO3O43524 673 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 BRD1O95696 1058 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 SSFA2P28290 1259 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 TBCELQ5QJ74 424 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 NIFKQ9BYG3 293 aaKnown RBP12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 MYO3AQ8NEV4 1616 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 NPATQ14207 1427 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
FNDC3B-211ENST00000490832 C21orf2O43822 256 aa12.02□□□□□ -0.49
FNDC3B-211ENST00000490832 PPP1R12BO60237 982 aaPredicted RBP12.02□□□□□ -0.49
FNDC3B-211ENST00000490832 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
FNDC3B-211ENST00000490832 C1orf216Q8TAB5 229 aa12.02□□□□□ -0.49
FNDC3B-211ENST00000490832 CABP1Q9NZU7 370 aa12.02□□□□□ -0.49
FNDC3B-211ENST00000490832 PTPRTO14522 1441 aa12.02□□□□□ -0.49
FNDC3B-211ENST00000490832 TAS1R3Q7RTX0 852 aa12.01□□□□□ -0.49
FNDC3B-211ENST00000490832 PRICKLE2Q7Z3G6 844 aa12.01□□□□□ -0.49
FNDC3B-211ENST00000490832 ZNF295-AS1Q8N0V1 137 aa12.01□□□□□ -0.49
FNDC3B-211ENST00000490832 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
FNDC3B-211ENST00000490832 FIGNL2A6NMB9 653 aa12□□□□□ -0.49
FNDC3B-211ENST00000490832 KIF3BO15066 747 aa12□□□□□ -0.49
FNDC3B-211ENST00000490832 TEAD4Q15561 434 aa12□□□□□ -0.49
FNDC3B-211ENST00000490832 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
FNDC3B-211ENST00000490832 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
FNDC3B-211ENST00000490832 LTBP4Q8N2S1 1624 aa12□□□□□ -0.49
FNDC3B-211ENST00000490832 MAN1A2O60476 641 aa11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 FKBP5Q13451 457 aaPredicted RBP11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.99□□□□□ -0.493e-10■■□□□ 11.7
FNDC3B-211ENST00000490832 C4orf17Q53FE4 359 aa11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 WDR44Q5JSH3 913 aa11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 KCTD17Q8N5Z5 321 aa11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 TRIM47Q96LD4 638 aa11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 C2orf49Q9BVC5 232 aaPredicted RBP11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 VPS8Q8N3P4 1428 aa11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
FNDC3B-211ENST00000490832 RTEL1-TNFRSF6BF6WH68 1400 aa11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 ZNF335Q9H4Z2 1342 aaPredicted RBP11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 SERTM1A2A2V5 107 aa11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 LCE2BO14633 110 aa11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 POU4F2Q12837 409 aa11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 PHLDB3Q6NSJ2 640 aa11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 NBPF10Q6P3W6 841 aaKnown RBP11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 POTEAQ6S8J7 498 aa11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 GMPR2Q9P2T1 348 aaKnown RBP11.98□□□□□ -0.49
FNDC3B-211ENST00000490832 LRRC9Q6ZRR7 1453 aa11.97□□□□□ -0.49
FNDC3B-211ENST00000490832 NOS2P35228 1153 aa11.97□□□□□ -0.49
FNDC3B-211ENST00000490832 PLA2G4AP47712 749 aa11.97□□□□□ -0.49
FNDC3B-211ENST00000490832 HIRAP54198 1017 aaPredicted RBP11.97□□□□□ -0.49
FNDC3B-211ENST00000490832 ZDHHC1Q8WTX9 485 aa11.97□□□□□ -0.49
FNDC3B-211ENST00000490832 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
FNDC3B-211ENST00000490832 ZNF232Q9UNY5 417 aa11.97□□□□□ -0.49
FNDC3B-211ENST00000490832 PATL2C9JE40 543 aaKnown RBP11.96□□□□□ -0.49
FNDC3B-211ENST00000490832 PTCD1O75127 700 aaKnown RBP11.96□□□□□ -0.49
FNDC3B-211ENST00000490832 KCNA1Q09470 495 aa11.96□□□□□ -0.49
FNDC3B-211ENST00000490832 L3MBTL2Q969R5 705 aa11.96□□□□□ -0.49
FNDC3B-211ENST00000490832 COL26A1Q96A83 441 aa11.96□□□□□ -0.49
FNDC3B-211ENST00000490832 EML1O00423 815 aa11.95□□□□□ -0.5
FNDC3B-211ENST00000490832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.95□□□□□ -0.5
FNDC3B-211ENST00000490832 MTMR7Q9Y216 660 aa11.95□□□□□ -0.5
FNDC3B-211ENST00000490832 ARHGEF5Q12774 1597 aa11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 RHOQP17081 205 aa11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 PHKA2P46019 1235 aa11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 NBPF1Q3BBV0 1214 aa11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 PARP3Q9Y6F1 533 aa11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 KDM5DQ9BY66 1539 aa11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 A2ML1A8K2U0 1454 aa11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 TCOF1Q13428 1488 aaKnown RBP11.94□□□□□ -0.5
FNDC3B-211ENST00000490832 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
FNDC3B-211ENST00000490832 TNRQ92752 1358 aa11.93□□□□□ -0.5
FNDC3B-211ENST00000490832 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
FNDC3B-211ENST00000490832 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms