RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CUL4AQ13619 759 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
BRD9-209ENST00000490814 INTS4Q96HW7 963 aaKnown RBP12.05□□□□□ -0.48
BRD9-209ENST00000490814 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 STX6O43752 255 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
BRD9-209ENST00000490814 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 FEZ2Q9UHY8 353 aaPredicted RBP12.04□□□□□ -0.48
BRD9-209ENST00000490814 PYCARDQ9ULZ3 195 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
BRD9-209ENST00000490814 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 SIRT1Q96EB6 747 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 TCEANC2Q96MN5 208 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
BRD9-209ENST00000490814 C9orf78Q9NZ63 289 aaPredicted RBP12.04□□□□□ -0.48
BRD9-209ENST00000490814 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 GOLGA6L4A6NEF3 574 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 KDM4AO75164 1064 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 SYT1P21579 422 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 GTF2A1P52655 376 aaPredicted RBP12.03□□□□□ -0.48
BRD9-209ENST00000490814 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 CARD10Q9BWT7 1032 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 STRCQ7RTU9 1775 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 SOS1Q07889 1333 aaPredicted RBP12.03□□□□□ -0.48
BRD9-209ENST00000490814 ZSCAN22P10073 491 aaPredicted RBP12.03□□□□□ -0.48
BRD9-209ENST00000490814 ZNF592Q92610 1267 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
BRD9-209ENST00000490814 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 GOLGA6L6A8MZA4 724 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 IFIT2P09913 472 aaKnown RBP12.03□□□□□ -0.48
BRD9-209ENST00000490814 DNM1Q05193 864 aaKnown RBP12.03□□□□□ -0.48
BRD9-209ENST00000490814 CAMK4Q16566 473 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 LIMCH1Q9UPQ0 1083 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 CRB1P82279 1406 aa12.03□□□□□ -0.48
BRD9-209ENST00000490814 IL17REQ8NFR9 667 aa12.02□□□□□ -0.48
BRD9-209ENST00000490814 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.48
BRD9-209ENST00000490814 GCP02774 474 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 HSPA4P34932 840 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 TERF2Q15554 542 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 MYCBPQ99417 103 aaPredicted RBP12.02□□□□□ -0.49
BRD9-209ENST00000490814 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 GJB2P29033 226 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 TEFQ10587 303 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 AIMP1Q12904 312 aaKnown RBP12.02□□□□□ -0.49
BRD9-209ENST00000490814 FAM173BQ6P4H8 233 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.49
BRD9-209ENST00000490814 C16orf45Q96MC5 204 aaPredicted RBP12.02□□□□□ -0.49
BRD9-209ENST00000490814 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 PA2G4Q9UQ80 394 aaKnown RBP12.02□□□□□ -0.49
BRD9-209ENST00000490814 ATP6V1DQ9Y5K8 247 aa12.02□□□□□ -0.49
BRD9-209ENST00000490814 C1orf167Q5SNV9 1468 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 STK3Q13188 491 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 SIL1Q9H173 461 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 SGSM2O43147 1006 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 RSPH14Q9UHP6 348 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 FLT4P35916 1363 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 PLEKHG3A1L390 1219 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 LARGE1O95461 756 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 RUFY3Q7L099 469 aa12.01□□□□□ -0.49
BRD9-209ENST00000490814 FOSBP53539 338 aa12□□□□□ -0.49
BRD9-209ENST00000490814 ANKRD7Q92527 254 aa12□□□□□ -0.49
BRD9-209ENST00000490814 F13A1P00488 732 aa12□□□□□ -0.49
BRD9-209ENST00000490814 ZKSCAN1P17029 563 aaPredicted RBP12□□□□□ -0.49
BRD9-209ENST00000490814 PTGS1P23219 599 aa12□□□□□ -0.49
BRD9-209ENST00000490814 KIAA1524Q8TCG1 905 aa12□□□□□ -0.49
BRD9-209ENST00000490814 STAP2Q9UGK3 403 aa12□□□□□ -0.49
BRD9-209ENST00000490814 CYP46A1Q9Y6A2 500 aa12□□□□□ -0.49
BRD9-209ENST00000490814 KCNQ3O43525 872 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 UBE2HP62256 183 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 AACSQ86V21 672 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 RUFY2Q8WXA3 655 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 RAD50Q92878 1312 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 LARP1BQ659C4 914 aaKnown RBP11.99□□□□□ -0.49
BRD9-209ENST00000490814 TOM1L2Q6ZVM7 507 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 DNAAF4Q8WXU2 420 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 NRXN3Q9Y4C0 1643 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 PTH1RQ03431 593 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 ADCK5Q3MIX3 580 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 FAM43BQ6ZT52 329 aaPredicted RBP11.99□□□□□ -0.49
BRD9-209ENST00000490814 CKAP2LQ8IYA6 745 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 GPATCH3Q96I76 525 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
BRD9-209ENST00000490814 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 SPTLC3Q9NUV7 552 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 TFIP11Q9UBB9 837 aaKnown RBP11.99□□□□□ -0.49
BRD9-209ENST00000490814 SALL3Q9BXA9 1300 aa11.99□□□□□ -0.49
BRD9-209ENST00000490814 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
BRD9-209ENST00000490814 SSH3Q8TE77 659 aa11.98□□□□□ -0.49
BRD9-209ENST00000490814 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
BRD9-209ENST00000490814 USP6P35125 1406 aa11.98□□□□□ -0.49
BRD9-209ENST00000490814 GLRX3O76003 335 aaKnown RBP11.98□□□□□ -0.49
BRD9-209ENST00000490814 CCDC186Q7Z3E2 898 aa11.98□□□□□ -0.49
BRD9-209ENST00000490814 EGFL6Q8IUX8 553 aa11.98□□□□□ -0.49
BRD9-209ENST00000490814 PI4K2BQ8TCG2 481 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms