RNA–Protein interactions for RNA: ENST00000490705.1

ARF1-211, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 881 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-211ENST00000490705 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
ARF1-211ENST00000490705 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
ARF1-211ENST00000490705 NLRP10Q86W26 655 aa17.23■□□□□ 0.35
ARF1-211ENST00000490705 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
ARF1-211ENST00000490705 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
ARF1-211ENST00000490705 TCERG1O14776 1098 aaKnown RBP17.22■□□□□ 0.35
ARF1-211ENST00000490705 C21orf2O43822 256 aa17.22■□□□□ 0.35
ARF1-211ENST00000490705 RASSF7Q02833 373 aa17.22■□□□□ 0.35
ARF1-211ENST00000490705 SPINK5Q9NQ38 1064 aaPredicted RBP17.22■□□□□ 0.35
ARF1-211ENST00000490705 SBF1O95248 1867 aa17.21■□□□□ 0.35
ARF1-211ENST00000490705 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
ARF1-211ENST00000490705 CRY2Q49AN0 593 aa17.21■□□□□ 0.35
ARF1-211ENST00000490705 C9orf131Q5VYM1 1079 aa17.21■□□□□ 0.35
ARF1-211ENST00000490705 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
ARF1-211ENST00000490705 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
ARF1-211ENST00000490705 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
ARF1-211ENST00000490705 DDX58O95786 925 aaKnown RBP17.2■□□□□ 0.34
ARF1-211ENST00000490705 ZNF526Q8TF50 670 aaPredicted RBP17.2■□□□□ 0.34
ARF1-211ENST00000490705 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
ARF1-211ENST00000490705 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
ARF1-211ENST00000490705 SH3TC1Q8TE82 1336 aa17.2■□□□□ 0.34
ARF1-211ENST00000490705 ZNF521Q96K83 1311 aa17.2■□□□□ 0.34
ARF1-211ENST00000490705 FER1L6Q2WGJ9 1857 aa17.19■□□□□ 0.34
ARF1-211ENST00000490705 NFKBIEO00221 500 aa17.19■□□□□ 0.34
ARF1-211ENST00000490705 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
ARF1-211ENST00000490705 NLRP3Q96P20 1036 aa17.19■□□□□ 0.34
ARF1-211ENST00000490705 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
ARF1-211ENST00000490705 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
ARF1-211ENST00000490705 SOGA3Q5TF21 947 aa17.18■□□□□ 0.34
ARF1-211ENST00000490705 MYD88Q99836 296 aa17.18■□□□□ 0.34
ARF1-211ENST00000490705 LAMB2P55268 1798 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 VAMP4O75379 141 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 HCLS1P14317 486 aaPredicted RBP17.17■□□□□ 0.34
ARF1-211ENST00000490705 LMNB1P20700 586 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 CCDC88AQ3V6T2 1871 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 SLC10A5Q5PT55 438 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 C3orf67Q6ZVT6 689 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 SYNE4Q8N205 404 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 RBM17Q96I25 401 aaKnown RBP17.17■□□□□ 0.34
ARF1-211ENST00000490705 GPBP1L1Q9HC44 474 aaPredicted RBP17.17■□□□□ 0.34
ARF1-211ENST00000490705 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
ARF1-211ENST00000490705 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
ARF1-211ENST00000490705 MIER1Q8N108 512 aa17.16■□□□□ 0.34
ARF1-211ENST00000490705 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
ARF1-211ENST00000490705 TIAM2Q8IVF5 1701 aa17.16■□□□□ 0.34
ARF1-211ENST00000490705 DDX60Q8IY21 1712 aaKnown RBP17.16■□□□□ 0.34
ARF1-211ENST00000490705 PI4KAP2A4QPH2 592 aa17.15■□□□□ 0.34
ARF1-211ENST00000490705 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
ARF1-211ENST00000490705 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
ARF1-211ENST00000490705 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
ARF1-211ENST00000490705 KSR2Q6VAB6 950 aa17.15■□□□□ 0.34
ARF1-211ENST00000490705 G2E3Q7L622 706 aa17.15■□□□□ 0.34
ARF1-211ENST00000490705 PI4KAP1Q8N8J0 262 aa17.15■□□□□ 0.34
ARF1-211ENST00000490705 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
ARF1-211ENST00000490705 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
ARF1-211ENST00000490705 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
ARF1-211ENST00000490705 TAOK3Q9H2K8 898 aa17.15■□□□□ 0.34
ARF1-211ENST00000490705 E9PSI1 815 aa17.14■□□□□ 0.33
ARF1-211ENST00000490705 PRELPP51888 382 aa17.14■□□□□ 0.33
ARF1-211ENST00000490705 FLIIQ13045 1269 aa17.14■□□□□ 0.33
ARF1-211ENST00000490705 OLFM4Q6UX06 510 aa17.14■□□□□ 0.33
ARF1-211ENST00000490705 CRAMP1Q96RY5 1269 aa17.14■□□□□ 0.33
ARF1-211ENST00000490705 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
ARF1-211ENST00000490705 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
ARF1-211ENST00000490705 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
ARF1-211ENST00000490705 CCDC191Q8NCU4 936 aa17.13■□□□□ 0.33
ARF1-211ENST00000490705 DICER1Q9UPY3 1922 aaKnown RBP17.12■□□□□ 0.33
ARF1-211ENST00000490705 PPEF1O14829 653 aaPredicted RBP17.12■□□□□ 0.33
ARF1-211ENST00000490705 CWC25Q9NXE8 425 aaPredicted RBP17.12■□□□□ 0.33
ARF1-211ENST00000490705 ABCC4O15439 1325 aa17.12■□□□□ 0.33
ARF1-211ENST00000490705 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
ARF1-211ENST00000490705 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
ARF1-211ENST00000490705 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
ARF1-211ENST00000490705 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
ARF1-211ENST00000490705 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
ARF1-211ENST00000490705 PCCAP05165 728 aaPredicted RBP17.1■□□□□ 0.33
ARF1-211ENST00000490705 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
ARF1-211ENST00000490705 SLFN5Q08AF3 891 aa17.1■□□□□ 0.33
ARF1-211ENST00000490705 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
ARF1-211ENST00000490705 HSP90B1P14625 803 aaKnown RBP17.09■□□□□ 0.33
ARF1-211ENST00000490705 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
ARF1-211ENST00000490705 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
ARF1-211ENST00000490705 CDCA7LQ96GN5 454 aa17.09■□□□□ 0.33
ARF1-211ENST00000490705 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
ARF1-211ENST00000490705 KDM2BQ8NHM5 1336 aa17.09■□□□□ 0.33
ARF1-211ENST00000490705 TAF1P21675 1872 aa17.08■□□□□ 0.33
ARF1-211ENST00000490705 SNED1Q8TER0 1413 aa17.08■□□□□ 0.32
ARF1-211ENST00000490705 GRAPQ13588 217 aa17.08■□□□□ 0.32
ARF1-211ENST00000490705 CWF19L2Q2TBE0 894 aaKnown RBP17.08■□□□□ 0.32
ARF1-211ENST00000490705 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
ARF1-211ENST00000490705 GRAPLQ8TC17 118 aaPredicted RBP17.08■□□□□ 0.32
ARF1-211ENST00000490705 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
ARF1-211ENST00000490705 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.32
ARF1-211ENST00000490705 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
ARF1-211ENST00000490705 SF3B3Q15393 1217 aaKnown RBP17.07■□□□□ 0.32
ARF1-211ENST00000490705 NMRK2Q9NPI5 230 aa17.07■□□□□ 0.32
ARF1-211ENST00000490705 BBOX1O75936 387 aa17.06■□□□□ 0.32
ARF1-211ENST00000490705 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
ARF1-211ENST00000490705 PSMD1Q99460 953 aa17.06■□□□□ 0.32
ARF1-211ENST00000490705 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms