RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PPP1R42Q7Z4L9 355 aa13.79□□□□□ -0.2
VARS2-210ENST00000490699 CCDC191Q8NCU4 936 aa13.79□□□□□ -0.2
VARS2-210ENST00000490699 PANK1Q8TE04 598 aa13.79□□□□□ -0.2
VARS2-210ENST00000490699 SETDB2Q96T68 719 aa13.79□□□□□ -0.2
VARS2-210ENST00000490699 NIP7Q9Y221 180 aaKnown RBP eCLIP13.79□□□□□ -0.2
VARS2-210ENST00000490699 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
VARS2-210ENST00000490699 GNAI3P08754 354 aa13.78□□□□□ -0.2
VARS2-210ENST00000490699 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
VARS2-210ENST00000490699 AAMPQ13685 434 aa13.78□□□□□ -0.2
VARS2-210ENST00000490699 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
VARS2-210ENST00000490699 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
VARS2-210ENST00000490699 SLC16A10Q8TF71 515 aa13.78□□□□□ -0.2
VARS2-210ENST00000490699 NYXQ9GZU5 481 aa13.78□□□□□ -0.2
VARS2-210ENST00000490699 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
VARS2-210ENST00000490699 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
VARS2-210ENST00000490699 NEURL1BA8MQ27 555 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 GPTP24298 496 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 HLFQ16534 295 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 BEND3Q5T5X7 828 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 CARMIL3Q8ND23 1372 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 COG6Q9Y2V7 657 aa13.77□□□□□ -0.21
VARS2-210ENST00000490699 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
VARS2-210ENST00000490699 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
VARS2-210ENST00000490699 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
VARS2-210ENST00000490699 GRM8O00222 908 aa13.75□□□□□ -0.21
VARS2-210ENST00000490699 GYS1P13807 737 aa13.75□□□□□ -0.21
VARS2-210ENST00000490699 GCKRQ14397 625 aa13.75□□□□□ -0.21
VARS2-210ENST00000490699 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
VARS2-210ENST00000490699 CWF19L2Q2TBE0 894 aaKnown RBP13.75□□□□□ -0.21
VARS2-210ENST00000490699 SMIM5Q71RC9 77 aa13.75□□□□□ -0.21
VARS2-210ENST00000490699 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
VARS2-210ENST00000490699 ISCA1Q9BUE6 129 aa13.75□□□□□ -0.21
VARS2-210ENST00000490699 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
VARS2-210ENST00000490699 TRMT112Q9UI30 125 aaKnown RBP13.75□□□□□ -0.21
VARS2-210ENST00000490699 PARP3Q9Y6F1 533 aa13.75□□□□□ -0.21
VARS2-210ENST00000490699 RLBP1P12271 317 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
VARS2-210ENST00000490699 FKBP8Q14318 412 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 C20orf194Q5TEA3 1177 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 TBC1D9BQ66K14 1250 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 TPTE2Q6XPS3 522 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 AMIGO3Q86WK7 504 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 ZNF34Q8IZ26 560 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 CRBNQ96SW2 442 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
VARS2-210ENST00000490699 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
VARS2-210ENST00000490699 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
VARS2-210ENST00000490699 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
VARS2-210ENST00000490699 POLD1P28340 1107 aa13.73□□□□□ -0.21
VARS2-210ENST00000490699 ST5P78524 1137 aa13.73□□□□□ -0.21
VARS2-210ENST00000490699 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
VARS2-210ENST00000490699 GNAI2P04899 355 aa13.72□□□□□ -0.21
VARS2-210ENST00000490699 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
VARS2-210ENST00000490699 NFIXQ14938 502 aa13.72□□□□□ -0.21
VARS2-210ENST00000490699 ERICH6BQ5W0A0 696 aa13.72□□□□□ -0.21
VARS2-210ENST00000490699 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
VARS2-210ENST00000490699 ZBTB38Q8NAP3 1195 aaPredicted RBP13.72□□□□□ -0.21
VARS2-210ENST00000490699 MTFR1LQ9H019 292 aa13.72□□□□□ -0.21
VARS2-210ENST00000490699 BCL2L12Q9HB09 334 aa13.72□□□□□ -0.21
VARS2-210ENST00000490699 UBN2Q6ZU65 1347 aa13.71□□□□□ -0.21
VARS2-210ENST00000490699 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
VARS2-210ENST00000490699 COL24A1Q17RW2 1714 aa13.7□□□□□ -0.22
VARS2-210ENST00000490699 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
VARS2-210ENST00000490699 SERPINB2P05120 415 aa13.7□□□□□ -0.22
VARS2-210ENST00000490699 MMP10P09238 476 aa13.7□□□□□ -0.22
VARS2-210ENST00000490699 SUSD4Q5VX71 490 aa13.7□□□□□ -0.22
VARS2-210ENST00000490699 MEIS3Q99687 375 aa13.7□□□□□ -0.22
VARS2-210ENST00000490699 CDHR2Q9BYE9 1310 aa13.69□□□□□ -0.22
VARS2-210ENST00000490699 IRS4O14654 1257 aaPredicted RBP13.69□□□□□ -0.22
VARS2-210ENST00000490699 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
VARS2-210ENST00000490699 HMMRO75330 724 aa13.69□□□□□ -0.22
VARS2-210ENST00000490699 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
VARS2-210ENST00000490699 EXOC6Q8TAG9 804 aa13.69□□□□□ -0.22
VARS2-210ENST00000490699 FAM89AQ96GI7 184 aa13.69□□□□□ -0.22
VARS2-210ENST00000490699 USP44Q9H0E7 712 aa13.69□□□□□ -0.22
VARS2-210ENST00000490699 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 UTYO14607 1347 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 H7C1W4 665 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 PDE8AO60658 829 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 ZBTB7AO95365 584 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 NTSR2O95665 410 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 TM4SF1P30408 202 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 CHMP3Q9Y3E7 222 aa13.68□□□□□ -0.22
VARS2-210ENST00000490699 POLRMTO00411 1230 aaKnown RBP13.67□□□□□ -0.22
VARS2-210ENST00000490699 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
VARS2-210ENST00000490699 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
VARS2-210ENST00000490699 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
VARS2-210ENST00000490699 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
VARS2-210ENST00000490699 LAMB2P55268 1798 aa13.66□□□□□ -0.22
VARS2-210ENST00000490699 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
VARS2-210ENST00000490699 CCDC152Q4G0S7 254 aa13.66□□□□□ -0.22
VARS2-210ENST00000490699 LHX8Q68G74 356 aa13.66□□□□□ -0.22
VARS2-210ENST00000490699 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
VARS2-210ENST00000490699 SPON1Q9HCB6 807 aa13.66□□□□□ -0.22
VARS2-210ENST00000490699 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
VARS2-210ENST00000490699 MYH3P11055 1940 aa13.65□□□□□ -0.22
VARS2-210ENST00000490699 PDE6BP35913 854 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms