RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 CLEC17AQ6ZS10 378 aa19.49■□□□□ 0.71
SNX5-214ENST00000490175 LSG1Q9H089 658 aaKnown RBP19.49■□□□□ 0.71
SNX5-214ENST00000490175 RTN4Q9NQC3 1192 aaKnown RBP19.49■□□□□ 0.71
SNX5-214ENST00000490175 WNK3Q9BYP7 1800 aa19.48■□□□□ 0.71
SNX5-214ENST00000490175 CWC27Q6UX04 472 aaKnown RBP19.47■□□□□ 0.71
SNX5-214ENST00000490175 KLHDC4Q8TBB5 520 aa19.47■□□□□ 0.71
SNX5-214ENST00000490175 PIGBQ92521 554 aa19.47■□□□□ 0.71
SNX5-214ENST00000490175 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
SNX5-214ENST00000490175 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.47■□□□□ 0.71
SNX5-214ENST00000490175 FOXO4P98177 505 aa19.46■□□□□ 0.71
SNX5-214ENST00000490175 JARID2Q92833 1246 aaPredicted RBP19.46■□□□□ 0.71
SNX5-214ENST00000490175 LTBP4Q8N2S1 1624 aa19.45■□□□□ 0.7
SNX5-214ENST00000490175 STARD3NLO95772 234 aa19.45■□□□□ 0.7
SNX5-214ENST00000490175 LMBR1LQ6UX01 489 aa19.45■□□□□ 0.7
SNX5-214ENST00000490175 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
SNX5-214ENST00000490175 BCL9O00512 1426 aa19.45■□□□□ 0.7
SNX5-214ENST00000490175 TRAK2O60296 914 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 TNNI3KQ59H18 835 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 TMX3Q96JJ7 454 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 ZBTB3Q9H5J0 574 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 TLR7Q9NYK1 1049 aaKnown RBP19.44■□□□□ 0.7
SNX5-214ENST00000490175 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 FPGT-TNNI3KV9GXZ4 949 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 CYP2E1P05181 493 aaPredicted RBP19.44■□□□□ 0.7
SNX5-214ENST00000490175 TRIM28Q13263 835 aaKnown RBP19.44■□□□□ 0.7
SNX5-214ENST00000490175 CUL4AQ13619 759 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 ISCA1Q9BUE6 129 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 CDCA7Q9BWT1 371 aaPredicted RBP19.44■□□□□ 0.7
SNX5-214ENST00000490175 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
SNX5-214ENST00000490175 EXOC5O00471 708 aa19.43■□□□□ 0.7
SNX5-214ENST00000490175 ATP5JP18859 108 aa19.43■□□□□ 0.7
SNX5-214ENST00000490175 SSFA2P28290 1259 aa19.43■□□□□ 0.7
SNX5-214ENST00000490175 TFCP2Q12800 502 aa19.43■□□□□ 0.7
SNX5-214ENST00000490175 INTS4Q96HW7 963 aaKnown RBP19.43■□□□□ 0.7
SNX5-214ENST00000490175 TCIRG1Q13488 830 aa19.42■□□□□ 0.7
SNX5-214ENST00000490175 SNX14Q9Y5W7 946 aa19.42■□□□□ 0.7
SNX5-214ENST00000490175 SKOR2Q2VWA4 1001 aaPredicted RBP19.42■□□□□ 0.7
SNX5-214ENST00000490175 KIF6Q6ZMV9 814 aa19.42■□□□□ 0.7
SNX5-214ENST00000490175 DNAJC10Q8IXB1 793 aa19.42■□□□□ 0.7
SNX5-214ENST00000490175 GOLGA6L22H0YM25 854 aa19.41■□□□□ 0.7
SNX5-214ENST00000490175 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
SNX5-214ENST00000490175 GPR108Q9NPR9 543 aa19.41■□□□□ 0.7
SNX5-214ENST00000490175 RFX7Q2KHR2 1363 aa19.41■□□□□ 0.7
SNX5-214ENST00000490175 KCNB2Q92953 911 aa19.41■□□□□ 0.7
SNX5-214ENST00000490175 DBNLQ9UJU6 430 aaKnown RBP19.41■□□□□ 0.7
SNX5-214ENST00000490175 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
SNX5-214ENST00000490175 L1TD1Q5T7N2 865 aaKnown RBP19.4■□□□□ 0.7
SNX5-214ENST00000490175 ZGPATQ8N5A5 531 aaKnown RBP19.4■□□□□ 0.7
SNX5-214ENST00000490175 FSD1Q9BTV5 496 aa19.4■□□□□ 0.7
SNX5-214ENST00000490175 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
SNX5-214ENST00000490175 IL15P40933 162 aaPredicted RBP19.39■□□□□ 0.69
SNX5-214ENST00000490175 UPF3BQ9BZI7 483 aaKnown RBP19.39■□□□□ 0.69
SNX5-214ENST00000490175 CHMP3Q9Y3E7 222 aa19.39■□□□□ 0.69
SNX5-214ENST00000490175 NRAPQ86VF7 1730 aa19.39■□□□□ 0.69
SNX5-214ENST00000490175 CCDC171Q6TFL3 1326 aa19.39■□□□□ 0.69
SNX5-214ENST00000490175 CIAO1O76071 339 aa19.39■□□□□ 0.69
SNX5-214ENST00000490175 BAG4O95429 457 aaKnown RBP19.38■□□□□ 0.69
SNX5-214ENST00000490175 NMIQ13287 307 aaPredicted RBP19.38■□□□□ 0.69
SNX5-214ENST00000490175 ATG9AQ7Z3C6 839 aa19.38■□□□□ 0.69
SNX5-214ENST00000490175 TICAM2Q86XR7 235 aa19.38■□□□□ 0.69
SNX5-214ENST00000490175 TM6SF1Q9BZW5 370 aa19.38■□□□□ 0.69
SNX5-214ENST00000490175 MAP3K15Q6ZN16 1313 aa19.38■□□□□ 0.69
SNX5-214ENST00000490175 PTH1RQ03431 593 aa19.37■□□□□ 0.69
SNX5-214ENST00000490175 FBXO3Q9UK99 471 aa19.37■□□□□ 0.69
SNX5-214ENST00000490175 PCCAP05165 728 aaPredicted RBP19.37■□□□□ 0.69
SNX5-214ENST00000490175 HSP90AB3PQ58FF7 597 aa19.37■□□□□ 0.69
SNX5-214ENST00000490175 RASEFQ8IZ41 740 aa19.37■□□□□ 0.69
SNX5-214ENST00000490175 TTC14Q96N46 770 aa19.37■□□□□ 0.69
SNX5-214ENST00000490175 PLA2G12BQ9BX93 195 aa19.37■□□□□ 0.69
SNX5-214ENST00000490175 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.36■□□□□ 0.69
SNX5-214ENST00000490175 EYA2O00167 538 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 CYP19A1P11511 503 aaPredicted RBP19.36■□□□□ 0.69
SNX5-214ENST00000490175 NECTIN1Q15223 517 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 GIGYF2Q6Y7W6 1299 aaKnown RBP19.36■□□□□ 0.69
SNX5-214ENST00000490175 MAP4K1Q92918 833 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 FAM227BQ96M60 508 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 HAUS7Q99871 368 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 MED23Q9ULK4 1368 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 SPATA31A1Q5TZJ5 1347 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 DOT1LQ8TEK3 1739 aa19.36■□□□□ 0.69
SNX5-214ENST00000490175 DBNDD2Q9BQY9 259 aa19.35■□□□□ 0.69
SNX5-214ENST00000490175 ZKSCAN1P17029 563 aaPredicted RBP19.35■□□□□ 0.69
SNX5-214ENST00000490175 ZBTB38Q8NAP3 1195 aaPredicted RBP19.35■□□□□ 0.69
SNX5-214ENST00000490175 ZNF330Q9Y3S2 320 aaPredicted RBP19.35■□□□□ 0.69
SNX5-214ENST00000490175 JCADQ9P266 1359 aa19.35■□□□□ 0.69
SNX5-214ENST00000490175 ANKRD36CQ5JPF3 1778 aa19.34■□□□□ 0.69
SNX5-214ENST00000490175 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
SNX5-214ENST00000490175 CDHR2Q9BYE9 1310 aa19.34■□□□□ 0.69
SNX5-214ENST00000490175 NWD2Q9ULI1 1742 aa19.34■□□□□ 0.69
SNX5-214ENST00000490175 A0A0D9SFI3 127 aa19.34■□□□□ 0.69
SNX5-214ENST00000490175 PRPF40BQ6NWY9 871 aaKnown RBP19.34■□□□□ 0.69
SNX5-214ENST00000490175 RBM8AQ9Y5S9 174 aaKnown RBP19.34■□□□□ 0.69
SNX5-214ENST00000490175 PKP1Q13835 747 aa19.33■□□□□ 0.68
SNX5-214ENST00000490175 CCDC57Q2TAC2 916 aa19.33■□□□□ 0.68
SNX5-214ENST00000490175 SLC4A9Q96Q91 983 aa19.33■□□□□ 0.68
SNX5-214ENST00000490175 ZSWIM6Q9HCJ5 1215 aa19.33■□□□□ 0.68
SNX5-214ENST00000490175 LIMCH1Q9UPQ0 1083 aa19.33■□□□□ 0.68
SNX5-214ENST00000490175 ZNF609O15014 1411 aa19.33■□□□□ 0.68
SNX5-214ENST00000490175 CASTP20810 708 aaKnown RBP19.32■□□□□ 0.68
SNX5-214ENST00000490175 VPS53Q5VIR6 699 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms