RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 CTDSPL2Q05D32 466 aa5.5□□□□□ -1.53
RPN1-205ENST00000490166 NBPF8Q3BBV2 869 aa5.5□□□□□ -1.53
RPN1-205ENST00000490166 LARP1Q6PKG0 1096 aaKnown RBP5.5□□□□□ -1.53
RPN1-205ENST00000490166 CCDC125Q86Z20 511 aa5.5□□□□□ -1.53
RPN1-205ENST00000490166 EHBP1Q8NDI1 1231 aa5.5□□□□□ -1.53
RPN1-205ENST00000490166 NLRP2Q9NX02 1062 aa5.5□□□□□ -1.53
RPN1-205ENST00000490166 MAP10Q9P2G4 905 aa5.5□□□□□ -1.53
RPN1-205ENST00000490166 MARF1Q9Y4F3 1742 aaKnown RBP5.5□□□□□ -1.53
RPN1-205ENST00000490166 KTN1Q86UP2 1357 aaKnown RBP5.5□□□□□ -1.53
RPN1-205ENST00000490166 SPATA31A5Q5VU36 1347 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 SPATA31A7Q8IWB4 1347 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 SSH2Q76I76 1423 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 PHRF1Q9P1Y6 1649 aaKnown RBP5.49□□□□□ -1.53
RPN1-205ENST00000490166 APBB1O00213 710 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 AP1G2O75843 785 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 VARSP26640 1264 aaKnown RBP5.49□□□□□ -1.53
RPN1-205ENST00000490166 NBPF14Q5TI25 921 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 TCP11L2Q8N4U5 519 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 MTMR14Q8NCE2 650 aa5.49□□□□□ -1.53
RPN1-205ENST00000490166 SYTL4Q96C24 671 aaPredicted RBP5.49□□□□□ -1.53
RPN1-205ENST00000490166 SPATA31A1Q5TZJ5 1347 aa5.48□□□□□ -1.53
RPN1-205ENST00000490166 NRKQ7Z2Y5 1582 aa5.48□□□□□ -1.53
RPN1-205ENST00000490166 USP17L8P0C7I0 530 aa5.48□□□□□ -1.53
RPN1-205ENST00000490166 CNGB1Q14028 1251 aaPredicted RBP5.48□□□□□ -1.53
RPN1-205ENST00000490166 EZH2Q15910 746 aaKnown RBP5.48□□□□□ -1.53
RPN1-205ENST00000490166 DDB1Q16531 1140 aa5.48□□□□□ -1.53
RPN1-205ENST00000490166 LINC01559Q495D7 138 aa5.48□□□□□ -1.53
RPN1-205ENST00000490166 GPKOWQ92917 476 aaPredicted RBP eCLIP5.48□□□□□ -1.53
RPN1-205ENST00000490166 SNRKQ9NRH2 765 aa5.48□□□□□ -1.53
RPN1-205ENST00000490166 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.48□□□□□ -1.53
RPN1-205ENST00000490166 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
RPN1-205ENST00000490166 SIAH2O43255 324 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 AVPP01185 164 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 GCP02774 474 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 FAM196AQ6ZSG2 479 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 BPHLQ86WA6 291 aaPredicted RBP5.47□□□□□ -1.53
RPN1-205ENST00000490166 PNMA1Q8ND90 353 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 CCER1Q8TC90 406 aaPredicted RBP5.47□□□□□ -1.53
RPN1-205ENST00000490166 ACSBG1Q96GR2 724 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 TRPM3Q9HCF6 1732 aaPredicted RBP5.47□□□□□ -1.53
RPN1-205ENST00000490166 NWD2Q9ULI1 1742 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 USP6P35125 1406 aa5.47□□□□□ -1.53
RPN1-205ENST00000490166 NRAPQ86VF7 1730 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 AMPHP49418 695 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 AGERQ15109 404 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 CTC1Q2NKJ3 1217 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 NME9Q86XW9 330 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 MPNDQ8N594 471 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 KCNH5Q8NCM2 988 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 FAM174AQ8TBP5 190 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 LRRN4Q8WUT4 740 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 TERF2IPQ9NYB0 399 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 COG6Q9Y2V7 657 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 OVOS2A0A0G2JMS6 1433 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 OVOS2A0A0J9YW53 1432 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 CRB1P82279 1406 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 CPSF1Q10570 1443 aaKnown RBP5.46□□□□□ -1.54
RPN1-205ENST00000490166 OVOS2Q6IE36 1432 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 TOPAZ1Q8N9V7 1692 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 ALS2Q96Q42 1657 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 TTC21BQ7Z4L5 1316 aa5.46□□□□□ -1.54
RPN1-205ENST00000490166 TRPM1Q7Z4N2 1603 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 POLR3AO14802 1390 aaPredicted RBP5.45□□□□□ -1.54
RPN1-205ENST00000490166 J3QL48 77 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 RAD21O60216 631 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 ALDH1A1P00352 501 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 SMPD1P17405 629 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 TRIM26Q12899 539 aaPredicted RBP5.45□□□□□ -1.54
RPN1-205ENST00000490166 CRIPAKQ8N1N5 446 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 DDX54Q8TDD1 881 aaKnown RBP5.45□□□□□ -1.54
RPN1-205ENST00000490166 CLUAP1Q96AJ1 413 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 COG3Q96JB2 828 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 PRM3Q9NNZ6 103 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 STK32BQ9NY57 414 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 FKBPLQ9UIM3 349 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 SMG6Q86US8 1419 aaKnown RBP5.45□□□□□ -1.54
RPN1-205ENST00000490166 RGPD1P0DJD0 1748 aa5.45□□□□□ -1.54
RPN1-205ENST00000490166 ZC3H4Q9UPT8 1303 aaKnown RBP5.45□□□□□ -1.54
RPN1-205ENST00000490166 COL5A2P05997 1499 aaPredicted RBP5.45□□□□□ -1.54
RPN1-205ENST00000490166 EXOC5O00471 708 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 LCE2BO14633 110 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 TRAK2O60296 914 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 SMCPP49901 116 aaPredicted RBP5.44□□□□□ -1.54
RPN1-205ENST00000490166 PDXDC2PQ6P474 469 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 ANKRD24Q8TF21 1146 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 FOXJ1Q92949 421 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 KIAA1210Q9ULL0 1709 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 WASF2Q9Y6W5 498 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 USP19O94966 1318 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 TTC21AQ8NDW8 1320 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 BRWD3Q6RI45 1802 aa5.44□□□□□ -1.54
RPN1-205ENST00000490166 AXIN1O15169 862 aa5.43□□□□□ -1.54
RPN1-205ENST00000490166 ZBTB7AO95365 584 aa5.43□□□□□ -1.54
RPN1-205ENST00000490166 TNNT2P45379 298 aaPredicted RBP5.43□□□□□ -1.54
RPN1-205ENST00000490166 TMF1P82094 1093 aa5.43□□□□□ -1.54
RPN1-205ENST00000490166 NR6A1Q15406 480 aa5.43□□□□□ -1.54
RPN1-205ENST00000490166 SH3BP5LQ7L8J4 393 aa5.43□□□□□ -1.54
RPN1-205ENST00000490166 SH3RF1Q7Z6J0 888 aa5.43□□□□□ -1.54
RPN1-205ENST00000490166 USHBP1Q8N6Y0 703 aa5.43□□□□□ -1.54
RPN1-205ENST00000490166 POM121Q96HA1 1249 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms