RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 NEXNQ0ZGT2 675 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 TCIRG1Q13488 830 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 SLC15A2Q16348 729 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 TBC1D9BQ66K14 1250 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 MSL1Q68DK7 614 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 COL23A1Q86Y22 540 aaPredicted RBP9.39□□□□□ -0.91
CPA4-208ENST00000490117 LINS1Q8NG48 757 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 ISCA1Q9BUE6 129 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 PDGFDQ9GZP0 370 aaPredicted RBP9.39□□□□□ -0.91
CPA4-208ENST00000490117 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
CPA4-208ENST00000490117 ZPR1O75312 459 aa9.38□□□□□ -0.91
CPA4-208ENST00000490117 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
CPA4-208ENST00000490117 NBPF7P0C2Y1 421 aaPredicted RBP9.38□□□□□ -0.91
CPA4-208ENST00000490117 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
CPA4-208ENST00000490117 NIP7Q9Y221 180 aaKnown RBP eCLIP9.38□□□□□ -0.91
CPA4-208ENST00000490117 COL4A1P02462 1669 aa9.38□□□□□ -0.91
CPA4-208ENST00000490117 ZBTB7BO15156 539 aaPredicted RBP9.37□□□□□ -0.91
CPA4-208ENST00000490117 GCKRQ14397 625 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 B4GALNT3Q6L9W6 998 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 UBE3BQ7Z3V4 1068 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 NLRP10Q86W26 655 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 ZNF34Q8IZ26 560 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 SYNE4Q8N205 404 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 SUCLG2Q96I99 432 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 USP44Q9H0E7 712 aa9.37□□□□□ -0.91
CPA4-208ENST00000490117 CWC25Q9NXE8 425 aaPredicted RBP9.37□□□□□ -0.91
CPA4-208ENST00000490117 C9orf78Q9NZ63 289 aaPredicted RBP9.37□□□□□ -0.91
CPA4-208ENST00000490117 LRRFIP2Q9Y608 721 aaKnown RBP9.37□□□□□ -0.91
CPA4-208ENST00000490117 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
CPA4-208ENST00000490117 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
CPA4-208ENST00000490117 GRM8O00222 908 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 UBTFL1P0CB47 393 aaPredicted RBP9.36□□□□□ -0.91
CPA4-208ENST00000490117 GYS1P13807 737 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 HSP90AB3PQ58FF7 597 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 FAM89AQ96GI7 184 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 ZBTB40Q9NUA8 1239 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 ZNF652Q9Y2D9 606 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 ABCC12Q96J65 1359 aa9.36□□□□□ -0.91
CPA4-208ENST00000490117 NTSR2O95665 410 aa9.35□□□□□ -0.91
CPA4-208ENST00000490117 NFIXQ14938 502 aa9.35□□□□□ -0.91
CPA4-208ENST00000490117 R3HDM1Q15032 1099 aaKnown RBP9.35□□□□□ -0.91
CPA4-208ENST00000490117 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
CPA4-208ENST00000490117 CARMIL3Q8ND23 1372 aa9.35□□□□□ -0.91
CPA4-208ENST00000490117 DLEC1Q9Y238 1755 aa9.35□□□□□ -0.91
CPA4-208ENST00000490117 H7C1W4 665 aa9.34□□□□□ -0.91
CPA4-208ENST00000490117 ZBTB22O15209 634 aa9.34□□□□□ -0.91
CPA4-208ENST00000490117 GNAI3P08754 354 aa9.34□□□□□ -0.91
CPA4-208ENST00000490117 CASP7P55210 303 aa9.34□□□□□ -0.91
CPA4-208ENST00000490117 DDR1Q08345 913 aa9.34□□□□□ -0.91
CPA4-208ENST00000490117 CCDC191Q8NCU4 936 aa9.34□□□□□ -0.91
CPA4-208ENST00000490117 KAZALD1Q96I82 304 aa9.34□□□□□ -0.91
CPA4-208ENST00000490117 CCDC85AQ96PX6 553 aaPredicted RBP9.34□□□□□ -0.91
CPA4-208ENST00000490117 TRMT112Q9UI30 125 aaKnown RBP9.34□□□□□ -0.91
CPA4-208ENST00000490117 KIAA1551Q9HCM1 1747 aa9.34□□□□□ -0.92
CPA4-208ENST00000490117 UTYO14607 1347 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 KIF13BQ9NQT8 1826 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 GNAI2P04899 355 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 PCCAP05165 728 aaPredicted RBP9.33□□□□□ -0.92
CPA4-208ENST00000490117 HCLS1P14317 486 aaPredicted RBP9.33□□□□□ -0.92
CPA4-208ENST00000490117 TRIM28Q13263 835 aaKnown RBP9.33□□□□□ -0.92
CPA4-208ENST00000490117 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 CEP85Q6P2H3 762 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 CLEC4GQ6UXB4 293 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 ANKRD44Q8N8A2 993 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 FLAD1Q8NFF5 587 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 SETDB2Q96T68 719 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 UTP14AQ9BVJ6 771 aaKnown RBP9.33□□□□□ -0.92
CPA4-208ENST00000490117 BICC1Q9H694 974 aaKnown RBP9.33□□□□□ -0.92
CPA4-208ENST00000490117 PPP4R2Q9NY27 417 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
CPA4-208ENST00000490117 PNMA6EA0A0J9YXQ4 647 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 IRS4O14654 1257 aaPredicted RBP9.32□□□□□ -0.92
CPA4-208ENST00000490117 ZBTB7AO95365 584 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 IGHDP01880 384 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 C3orf67Q6ZVT6 689 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 PPP1R42Q7Z4L9 355 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
CPA4-208ENST00000490117 SIRT2Q8IXJ6 389 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 ZBTB38Q8NAP3 1195 aaPredicted RBP9.32□□□□□ -0.92
CPA4-208ENST00000490117 CCDC136Q96JN2 1154 aa9.32□□□□□ -0.92
CPA4-208ENST00000490117 SH3TC1Q8TE82 1336 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 CDHR2Q9BYE9 1310 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 LRP5O75197 1615 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 POLRMTO00411 1230 aaKnown RBP9.31□□□□□ -0.92
CPA4-208ENST00000490117 NPHP1O15259 732 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 SERPINB2P05120 415 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 MMP10P09238 476 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
CPA4-208ENST00000490117 TM4SF1P30408 202 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 FOXO4P98177 505 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 PRR5LQ6MZQ0 368 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 SKAP1Q86WV1 359 aa9.31□□□□□ -0.92
CPA4-208ENST00000490117 IBTKQ9P2D0 1353 aaPredicted RBP9.31□□□□□ -0.92
CPA4-208ENST00000490117 AK9Q5TCS8 1911 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms