RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 ZMIZ1Q9ULJ6 1067 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.46
RTN1-207ENST00000490111 ARFGEF1Q9Y6D6 1849 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 TNRC18O15417 2968 aaPredicted RBP5.96□□□□□ -1.46
RTN1-207ENST00000490111 USP47Q96K76 1375 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 PHF14O94880 888 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 NEFLP07196 543 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 MMP10P09238 476 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 ARID4AP29374 1257 aaPredicted RBP5.95□□□□□ -1.46
RTN1-207ENST00000490111 DIXDC1Q155Q3 683 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 LARGE2Q8N3Y3 721 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 KCNH5Q8NCM2 988 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 DCAF5Q96JK2 942 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 LNPKQ9C0E8 428 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 NLRP2Q9NX02 1062 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 PIM2Q9P1W9 311 aa5.95□□□□□ -1.46
RTN1-207ENST00000490111 SBNO2Q9Y2G9 1366 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 SBF1O95248 1867 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 BRCA1P38398 1863 aaKnown RBP5.94□□□□□ -1.46
RTN1-207ENST00000490111 DOT1LQ8TEK3 1739 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 ADGRB1O14514 1584 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.94□□□□□ -1.46
RTN1-207ENST00000490111 USP17L8P0C7I0 530 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 KCNA3P22001 575 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 ERCC5P28715 1186 aaPredicted RBP5.94□□□□□ -1.46
RTN1-207ENST00000490111 DEFB115Q30KQ5 88 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 DALRD3Q5D0E6 543 aaKnown RBP5.94□□□□□ -1.46
RTN1-207ENST00000490111 GORABQ5T7V8 394 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 CCDC181Q5TID7 509 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 RIC3Q7Z5B4 369 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 AMIGO3Q86WK7 504 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 ZNF710Q8N1W2 664 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 STK32AQ8WU08 396 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 METTL14Q9HCE5 456 aaKnown RBP5.94□□□□□ -1.46
RTN1-207ENST00000490111 CUEDC1Q9NWM3 386 aaPredicted RBP5.94□□□□□ -1.46
RTN1-207ENST00000490111 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
RTN1-207ENST00000490111 PASKQ96RG2 1323 aa5.94□□□□□ -1.46
RTN1-207ENST00000490111 WDR33Q9C0J8 1336 aaKnown RBP5.94□□□□□ -1.46
RTN1-207ENST00000490111 NSD3Q9BZ95 1437 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 TLDC2A0PJX2 215 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 SSFA2P28290 1259 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 FOSBP53539 338 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 SOX10P56693 466 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 FOXK1P85037 733 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 TAGLNQ01995 201 aaKnown RBP5.93□□□□□ -1.46
RTN1-207ENST00000490111 C1QBPQ07021 282 aaKnown RBP5.93□□□□□ -1.46
RTN1-207ENST00000490111 VAC14Q08AM6 782 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 DGKZQ13574 1117 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 HABP4Q5JVS0 413 aaKnown RBP5.93□□□□□ -1.46
RTN1-207ENST00000490111 CCDC87Q9NVE4 849 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 C4BP0C0L5 1744 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 TOGARAM1Q9Y4F4 1720 aa5.93□□□□□ -1.46
RTN1-207ENST00000490111 TAF1LQ8IZX4 1826 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 RASSF10A6NK89 507 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 AP1G2O75843 785 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 LMNB1P20700 586 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 EGFLAMQ63HQ2 1017 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 DPY19L2Q6NUT2 758 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 TEX2Q8IWB9 1127 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 DCAF11Q8TEB1 546 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 PIK3R5Q8WYR1 880 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 DDX12PQ92771 950 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 L3MBTL3Q96JM7 780 aaPredicted RBP5.92□□□□□ -1.46
RTN1-207ENST00000490111 DNAJC2Q99543 621 aaKnown RBP5.92□□□□□ -1.46
RTN1-207ENST00000490111 KLHL42Q9P2K6 505 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 UBR3Q6ZT12 1888 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 RAB3GAP2Q9H2M9 1393 aa5.92□□□□□ -1.46
RTN1-207ENST00000490111 KDM6AO15550 1401 aaPredicted RBP5.91□□□□□ -1.46
RTN1-207ENST00000490111 PDE4DIPQ5VU43 2346 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 SPTLC1O15269 473 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 POTEIP0CG38 1075 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 POTEJP0CG39 1038 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 SERPINB4P48594 390 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 MAP3K9P80192 1104 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 HDLBPQ00341 1268 aaKnown RBP5.91□□□□□ -1.46
RTN1-207ENST00000490111 RASSF7Q02833 373 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 TSNAXIP1Q2TAA8 658 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 SDE2Q6IQ49 451 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 NLGN1Q8N2Q7 840 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 PRR7Q8TB68 274 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 NPDC1Q9NQX5 325 aaPredicted RBP5.91□□□□□ -1.46
RTN1-207ENST00000490111 TSKSQ9UJT2 592 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 CLEC11AQ9Y240 323 aa5.91□□□□□ -1.46
RTN1-207ENST00000490111 ITGBL1O95965 494 aaPredicted RBP5.9□□□□□ -1.46
RTN1-207ENST00000490111 RAD51AP2Q09MP3 1159 aa5.9□□□□□ -1.46
RTN1-207ENST00000490111 TBC1D9Q6ZT07 1266 aa5.9□□□□□ -1.46
RTN1-207ENST00000490111 NBPF15Q8N660 670 aa5.9□□□□□ -1.46
RTN1-207ENST00000490111 NLRP7Q8WX94 980 aa5.9□□□□□ -1.46
RTN1-207ENST00000490111 TANGO6Q9C0B7 1094 aa5.9□□□□□ -1.46
RTN1-207ENST00000490111 CDHR5Q9HBB8 845 aa5.9□□□□□ -1.46
RTN1-207ENST00000490111 PALLDQ8WX93 1383 aa5.9□□□□□ -1.47
RTN1-207ENST00000490111 C4AP0C0L4 1744 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 TIAM2Q8IVF5 1701 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 ATP9BO43861 1147 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 LILRB3O75022 631 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 SOX11P35716 441 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 MCCD1P59942 119 aaPredicted RBP5.89□□□□□ -1.47
RTN1-207ENST00000490111 TMF1P82094 1093 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 QPCTQ16769 361 aa5.89□□□□□ -1.47
RTN1-207ENST00000490111 PTPROQ16827 1216 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms