RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 MYD88Q99836 296 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 PARP3Q9Y6F1 533 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 UBN2Q6ZU65 1347 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 SERPINB2P05120 415 aa15.81■□□□□ 0.12
HDAC1-210ENST00000490081 RIC1Q4ADV7 1423 aa15.81■□□□□ 0.12
HDAC1-210ENST00000490081 FRAT1Q92837 279 aaPredicted RBP15.81■□□□□ 0.12
HDAC1-210ENST00000490081 SRCIN1Q9C0H9 1055 aa15.81■□□□□ 0.12
HDAC1-210ENST00000490081 CWC25Q9NXE8 425 aaPredicted RBP15.81■□□□□ 0.12
HDAC1-210ENST00000490081 UTYO14607 1347 aa15.8■□□□□ 0.12
HDAC1-210ENST00000490081 PCCAP05165 728 aaPredicted RBP15.8■□□□□ 0.12
HDAC1-210ENST00000490081 GCKRQ14397 625 aa15.8■□□□□ 0.12
HDAC1-210ENST00000490081 SUSD4Q5VX71 490 aa15.8■□□□□ 0.12
HDAC1-210ENST00000490081 DZIP1LQ8IYY4 767 aaKnown RBP15.8■□□□□ 0.12
HDAC1-210ENST00000490081 UTP14AQ9BVJ6 771 aaKnown RBP15.8■□□□□ 0.12
HDAC1-210ENST00000490081 KIF13BQ9NQT8 1826 aa15.8■□□□□ 0.12
HDAC1-210ENST00000490081 ATP5J2-PTCD1G3V325 749 aa15.79■□□□□ 0.12
HDAC1-210ENST00000490081 H7C1W4 665 aa15.79■□□□□ 0.12
HDAC1-210ENST00000490081 NTSR2O95665 410 aa15.79■□□□□ 0.12
HDAC1-210ENST00000490081 HSP90B1P14625 803 aaKnown RBP15.79■□□□□ 0.12
HDAC1-210ENST00000490081 GPTP24298 496 aa15.79■□□□□ 0.12
HDAC1-210ENST00000490081 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
HDAC1-210ENST00000490081 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
HDAC1-210ENST00000490081 CDHR2Q9BYE9 1310 aa15.78■□□□□ 0.12
HDAC1-210ENST00000490081 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-210ENST00000490081 CWF19L2Q2TBE0 894 aaKnown RBP15.78■□□□□ 0.12
HDAC1-210ENST00000490081 SLC4A10Q6U841 1118 aa15.78■□□□□ 0.12
HDAC1-210ENST00000490081 BICDL1Q6ZP65 573 aa15.78■□□□□ 0.12
HDAC1-210ENST00000490081 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-210ENST00000490081 PDZRN3Q9UPQ7 1066 aa15.78■□□□□ 0.12
HDAC1-210ENST00000490081 SH3TC1Q8TE82 1336 aa15.77■□□□□ 0.12
HDAC1-210ENST00000490081 CHD4Q14839 1912 aa15.77■□□□□ 0.12
HDAC1-210ENST00000490081 PRR5LQ6MZQ0 368 aa15.77■□□□□ 0.12
HDAC1-210ENST00000490081 CNBD1Q8NA66 436 aa15.77■□□□□ 0.12
HDAC1-210ENST00000490081 BRIP1Q9BX63 1249 aa15.77■□□□□ 0.12
HDAC1-210ENST00000490081 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
HDAC1-210ENST00000490081 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
HDAC1-210ENST00000490081 CASP7P55210 303 aa15.76■□□□□ 0.11
HDAC1-210ENST00000490081 RRP1P56182 461 aaKnown RBP15.76■□□□□ 0.11
HDAC1-210ENST00000490081 PLA2G12BQ9BX93 195 aa15.76■□□□□ 0.11
HDAC1-210ENST00000490081 USP44Q9H0E7 712 aa15.76■□□□□ 0.11
HDAC1-210ENST00000490081 HDAC5Q9UQL6 1122 aa15.76■□□□□ 0.11
HDAC1-210ENST00000490081 CD2APQ9Y5K6 639 aa15.76■□□□□ 0.11
HDAC1-210ENST00000490081 GRM8O00222 908 aa15.75■□□□□ 0.11
HDAC1-210ENST00000490081 ST5P78524 1137 aa15.75■□□□□ 0.11
HDAC1-210ENST00000490081 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
HDAC1-210ENST00000490081 PIAS4Q8N2W9 510 aaPredicted RBP15.75■□□□□ 0.11
HDAC1-210ENST00000490081 C10orf71Q711Q0 1435 aa15.75■□□□□ 0.11
HDAC1-210ENST00000490081 RLBP1P12271 317 aa15.74■□□□□ 0.11
HDAC1-210ENST00000490081 TGFB2P61812 414 aa15.74■□□□□ 0.11
HDAC1-210ENST00000490081 TMEM57Q8N5G2 664 aa15.74■□□□□ 0.11
HDAC1-210ENST00000490081 CLUAP1Q96AJ1 413 aa15.74■□□□□ 0.11
HDAC1-210ENST00000490081 CHMP4BQ9H444 224 aaKnown RBP15.74■□□□□ 0.11
HDAC1-210ENST00000490081 LAMB2P55268 1798 aa15.74■□□□□ 0.11
HDAC1-210ENST00000490081 ANKRD31Q8N7Z5 1873 aa15.74■□□□□ 0.11
HDAC1-210ENST00000490081 PLIN1O60240 522 aa15.73■□□□□ 0.11
HDAC1-210ENST00000490081 GTF2E1P29083 439 aaPredicted RBP15.73■□□□□ 0.11
HDAC1-210ENST00000490081 PDE6BP35913 854 aa15.73■□□□□ 0.11
HDAC1-210ENST00000490081 ERFEQ4G0M1 354 aa15.73■□□□□ 0.11
HDAC1-210ENST00000490081 NLGN2Q8NFZ4 835 aa15.73■□□□□ 0.11
HDAC1-210ENST00000490081 FAM89AQ96GI7 184 aa15.73■□□□□ 0.11
HDAC1-210ENST00000490081 C9orf78Q9NZ63 289 aaPredicted RBP15.73■□□□□ 0.11
HDAC1-210ENST00000490081 TNNQ9UQP3 1299 aa15.73■□□□□ 0.11
HDAC1-210ENST00000490081 DDX60Q8IY21 1712 aaKnown RBP15.73■□□□□ 0.11
HDAC1-210ENST00000490081 MYH3P11055 1940 aa15.72■□□□□ 0.11
HDAC1-210ENST00000490081 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-210ENST00000490081 PDE8AO60658 829 aa15.72■□□□□ 0.11
HDAC1-210ENST00000490081 GNAI3P08754 354 aa15.72■□□□□ 0.11
HDAC1-210ENST00000490081 MVPQ14764 893 aaKnown RBP15.72■□□□□ 0.11
HDAC1-210ENST00000490081 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
HDAC1-210ENST00000490081 CRY2Q49AN0 593 aa15.72■□□□□ 0.11
HDAC1-210ENST00000490081 ZNF784Q8NCA9 323 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-210ENST00000490081 NLRP3Q96P20 1036 aa15.72■□□□□ 0.11
HDAC1-210ENST00000490081 SUPT16HQ9Y5B9 1047 aaKnown RBP15.72■□□□□ 0.11
HDAC1-210ENST00000490081 IRS4O14654 1257 aaPredicted RBP15.71■□□□□ 0.11
HDAC1-210ENST00000490081 AAMPQ13685 434 aa15.71■□□□□ 0.11
HDAC1-210ENST00000490081 NUTM1Q86Y26 1132 aa15.71■□□□□ 0.11
HDAC1-210ENST00000490081 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
HDAC1-210ENST00000490081 DDX19BQ9UMR2 479 aa15.71■□□□□ 0.11
HDAC1-210ENST00000490081 NPHP1O15259 732 aa15.7■□□□□ 0.1
HDAC1-210ENST00000490081 CSF1RP07333 972 aa15.7■□□□□ 0.1
HDAC1-210ENST00000490081 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-210ENST00000490081 UBE3BQ7Z3V4 1068 aa15.7■□□□□ 0.1
HDAC1-210ENST00000490081 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
HDAC1-210ENST00000490081 FAM177BA6PVY3 158 aa15.69■□□□□ 0.1
HDAC1-210ENST00000490081 HOXA10P31260 410 aaPredicted RBP15.69■□□□□ 0.1
HDAC1-210ENST00000490081 GPR162Q16538 588 aa15.69■□□□□ 0.1
HDAC1-210ENST00000490081 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
HDAC1-210ENST00000490081 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
HDAC1-210ENST00000490081 RTL9Q8NET4 1388 aa15.69■□□□□ 0.1
HDAC1-210ENST00000490081 ABCC12Q96J65 1359 aa15.69■□□□□ 0.1
HDAC1-210ENST00000490081 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
HDAC1-210ENST00000490081 UTRNP46939 3433 aa15.69■□□□□ 0.1
HDAC1-210ENST00000490081 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
HDAC1-210ENST00000490081 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
HDAC1-210ENST00000490081 SRGNP10124 158 aa15.68■□□□□ 0.1
HDAC1-210ENST00000490081 FOXO4P98177 505 aa15.68■□□□□ 0.1
HDAC1-210ENST00000490081 C20orf194Q5TEA3 1177 aa15.68■□□□□ 0.1
HDAC1-210ENST00000490081 ITPRIPQ8IWB1 547 aa15.68■□□□□ 0.1
HDAC1-210ENST00000490081 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
HDAC1-210ENST00000490081 ZBTB40Q9NUA8 1239 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms