RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 NLRP10Q86W26 655 aa16.83■□□□□ 0.28
TRAIP-210ENST00000489948 ARXQ96QS3 562 aa16.83■□□□□ 0.28
TRAIP-210ENST00000489948 MEIS3Q99687 375 aa16.83■□□□□ 0.28
TRAIP-210ENST00000489948 USP44Q9H0E7 712 aa16.83■□□□□ 0.28
TRAIP-210ENST00000489948 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
TRAIP-210ENST00000489948 DDX60Q8IY21 1712 aaKnown RBP16.82■□□□□ 0.28
TRAIP-210ENST00000489948 CARMIL3Q8ND23 1372 aa16.82■□□□□ 0.28
TRAIP-210ENST00000489948 ATP5J2-PTCD1G3V325 749 aa16.82■□□□□ 0.28
TRAIP-210ENST00000489948 GYS1P13807 737 aa16.82■□□□□ 0.28
TRAIP-210ENST00000489948 SMIM5Q71RC9 77 aa16.82■□□□□ 0.28
TRAIP-210ENST00000489948 COL23A1Q86Y22 540 aaPredicted RBP16.82■□□□□ 0.28
TRAIP-210ENST00000489948 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
TRAIP-210ENST00000489948 HDAC5Q9UQL6 1122 aa16.81■□□□□ 0.28
TRAIP-210ENST00000489948 CDHR2Q9BYE9 1310 aa16.8■□□□□ 0.28
TRAIP-210ENST00000489948 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
TRAIP-210ENST00000489948 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
TRAIP-210ENST00000489948 CASP7P55210 303 aa16.8■□□□□ 0.28
TRAIP-210ENST00000489948 NIP7Q9Y221 180 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRAIP-210ENST00000489948 H7C1W4 665 aa16.79■□□□□ 0.28
TRAIP-210ENST00000489948 GPTP24298 496 aa16.79■□□□□ 0.28
TRAIP-210ENST00000489948 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
TRAIP-210ENST00000489948 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
TRAIP-210ENST00000489948 C9orf78Q9NZ63 289 aaPredicted RBP16.79■□□□□ 0.28
TRAIP-210ENST00000489948 NTSR2O95665 410 aa16.78■□□□□ 0.28
TRAIP-210ENST00000489948 GNAI2P04899 355 aa16.78■□□□□ 0.28
TRAIP-210ENST00000489948 NBPF7P0C2Y1 421 aaPredicted RBP16.78■□□□□ 0.28
TRAIP-210ENST00000489948 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
TRAIP-210ENST00000489948 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
TRAIP-210ENST00000489948 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
TRAIP-210ENST00000489948 SETDB2Q96T68 719 aa16.77■□□□□ 0.28
TRAIP-210ENST00000489948 NYXQ9GZU5 481 aa16.77■□□□□ 0.28
TRAIP-210ENST00000489948 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
TRAIP-210ENST00000489948 TM4SF1P30408 202 aa16.76■□□□□ 0.27
TRAIP-210ENST00000489948 NFIXQ14938 502 aa16.76■□□□□ 0.27
TRAIP-210ENST00000489948 SUSD4Q5VX71 490 aa16.76■□□□□ 0.27
TRAIP-210ENST00000489948 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
TRAIP-210ENST00000489948 UTP14AQ9BVJ6 771 aaKnown RBP16.76■□□□□ 0.27
TRAIP-210ENST00000489948 PLA2G12BQ9BX93 195 aa16.76■□□□□ 0.27
TRAIP-210ENST00000489948 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
TRAIP-210ENST00000489948 MTX1Q13505 466 aa16.75■□□□□ 0.27
TRAIP-210ENST00000489948 TRMT112Q9UI30 125 aaKnown RBP16.75■□□□□ 0.27
TRAIP-210ENST00000489948 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
TRAIP-210ENST00000489948 RABL6Q3YEC7 729 aaPredicted RBP16.74■□□□□ 0.27
TRAIP-210ENST00000489948 CEP85Q6P2H3 762 aa16.74■□□□□ 0.27
TRAIP-210ENST00000489948 RPAP2Q8IXW5 612 aaPredicted RBP16.74■□□□□ 0.27
TRAIP-210ENST00000489948 KAZALD1Q96I82 304 aa16.74■□□□□ 0.27
TRAIP-210ENST00000489948 SUCLG2Q96I99 432 aa16.74■□□□□ 0.27
TRAIP-210ENST00000489948 PPP4R2Q9NY27 417 aa16.74■□□□□ 0.27
TRAIP-210ENST00000489948 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
TRAIP-210ENST00000489948 TNRC6CQ9HCJ0 1690 aaKnown RBP16.74■□□□□ 0.27
TRAIP-210ENST00000489948 LRP5O75197 1615 aa16.74■□□□□ 0.27
TRAIP-210ENST00000489948 POLRMTO00411 1230 aaKnown RBP16.73■□□□□ 0.27
TRAIP-210ENST00000489948 ANKRD44Q8N8A2 993 aa16.73■□□□□ 0.27
TRAIP-210ENST00000489948 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
TRAIP-210ENST00000489948 ABCC12Q96J65 1359 aa16.73■□□□□ 0.27
TRAIP-210ENST00000489948 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
TRAIP-210ENST00000489948 MSH5O43196 834 aa16.72■□□□□ 0.27
TRAIP-210ENST00000489948 DDR1Q08345 913 aa16.72■□□□□ 0.27
TRAIP-210ENST00000489948 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-210ENST00000489948 NBPF5PQ86XG9 351 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-210ENST00000489948 FAM89AQ96GI7 184 aa16.72■□□□□ 0.27
TRAIP-210ENST00000489948 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
TRAIP-210ENST00000489948 KIF13BQ9NQT8 1826 aa16.71■□□□□ 0.27
TRAIP-210ENST00000489948 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
TRAIP-210ENST00000489948 SLC10A5Q5PT55 438 aa16.71■□□□□ 0.27
TRAIP-210ENST00000489948 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
TRAIP-210ENST00000489948 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
TRAIP-210ENST00000489948 BICC1Q9H694 974 aaKnown RBP16.71■□□□□ 0.27
TRAIP-210ENST00000489948 RTL9Q8NET4 1388 aa16.71■□□□□ 0.27
TRAIP-210ENST00000489948 PDE8AO60658 829 aa16.7■□□□□ 0.26
TRAIP-210ENST00000489948 FOXO4P98177 505 aa16.7■□□□□ 0.26
TRAIP-210ENST00000489948 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
TRAIP-210ENST00000489948 HMMRO75330 724 aa16.69■□□□□ 0.26
TRAIP-210ENST00000489948 CTSWP56202 376 aa16.69■□□□□ 0.26
TRAIP-210ENST00000489948 ATP8B2P98198 1209 aa16.69■□□□□ 0.26
TRAIP-210ENST00000489948 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
TRAIP-210ENST00000489948 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
TRAIP-210ENST00000489948 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
TRAIP-210ENST00000489948 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
TRAIP-210ENST00000489948 PDGFDQ9GZP0 370 aaPredicted RBP16.69■□□□□ 0.26
TRAIP-210ENST00000489948 SERPINB2P05120 415 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 CSF1RP07333 972 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 MMP10P09238 476 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 POLA2Q14181 598 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
TRAIP-210ENST00000489948 ERFEQ4G0M1 354 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 C10orf71Q711Q0 1435 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 KDM2BQ8NHM5 1336 aa16.68■□□□□ 0.26
TRAIP-210ENST00000489948 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-210ENST00000489948 ST5P78524 1137 aa16.67■□□□□ 0.26
TRAIP-210ENST00000489948 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-210ENST00000489948 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
TRAIP-210ENST00000489948 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-210ENST00000489948 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
TRAIP-210ENST00000489948 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
TRAIP-210ENST00000489948 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
TRAIP-210ENST00000489948 PNMA6EA0A0J9YXQ4 647 aa16.66■□□□□ 0.26
TRAIP-210ENST00000489948 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms