RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SFSWAPQ12872 951 aaKnown RBP6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 USP4Q13107 963 aa6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 POM121Q96HA1 1249 aa6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 NCANO14594 1321 aa6.13□□□□□ -1.43
DEPDC1-204ENST00000489862 PRRG2O14669 202 aa6.13□□□□□ -1.43
DEPDC1-204ENST00000489862 TBC1D8BQ0IIM8 1120 aa6.13□□□□□ -1.43
DEPDC1-204ENST00000489862 WASHC4Q2M389 1173 aa6.13□□□□□ -1.43
DEPDC1-204ENST00000489862 SLC6A14Q9UN76 642 aa6.13□□□□□ -1.43
DEPDC1-204ENST00000489862 DOLKQ9UPQ8 538 aa6.13□□□□□ -1.43
DEPDC1-204ENST00000489862 STAU1O95793 577 aaKnown RBP6.12□□□□□ -1.43
DEPDC1-204ENST00000489862 SEMA3FQ13275 785 aa6.12□□□□□ -1.43
DEPDC1-204ENST00000489862 OXLD1Q5BKU9 147 aa6.12□□□□□ -1.43
DEPDC1-204ENST00000489862 PSAPL1Q6NUJ1 521 aa6.12□□□□□ -1.43
DEPDC1-204ENST00000489862 ABI1Q8IZP0 508 aa6.12□□□□□ -1.43
DEPDC1-204ENST00000489862 ARXQ96QS3 562 aa6.12□□□□□ -1.43
DEPDC1-204ENST00000489862 SMTNP53814 917 aa6.11□□□□□ -1.43
DEPDC1-204ENST00000489862 PKN1Q16512 942 aa6.11□□□□□ -1.43
DEPDC1-204ENST00000489862 CABP1Q9NZU7 370 aa6.11□□□□□ -1.43
DEPDC1-204ENST00000489862 GPC6Q9Y625 555 aaPredicted RBP6.11□□□□□ -1.43
DEPDC1-204ENST00000489862 INHAP05111 366 aa6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 LRRC69Q6ZNQ3 347 aa6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 RAB44Q7Z6P3 723 aaPredicted RBP6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 TMEM130Q8N3G9 435 aa6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 SIRT1Q96EB6 747 aa6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 CHIC2Q9UKJ5 165 aa6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 ANGEL1Q9UNK9 670 aaKnown RBP6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 GTF3C3Q9Y5Q9 886 aa6.1□□□□□ -1.43
DEPDC1-204ENST00000489862 B8ZZF3 427 aa6.09□□□□□ -1.43
DEPDC1-204ENST00000489862 PIK3CDO00329 1044 aa6.09□□□□□ -1.43
DEPDC1-204ENST00000489862 CDK2AP1O14519 115 aa6.09□□□□□ -1.43
DEPDC1-204ENST00000489862 NFIAQ12857 509 aa6.09□□□□□ -1.43
DEPDC1-204ENST00000489862 WFDC8Q8IUA0 241 aa6.09□□□□□ -1.43
DEPDC1-204ENST00000489862 PLPP7Q8NBV4 271 aa6.09□□□□□ -1.43
DEPDC1-204ENST00000489862 IGFLR1Q9H665 355 aa6.09□□□□□ -1.43
DEPDC1-204ENST00000489862 DHX15O43143 795 aaKnown RBP6.08□□□□□ -1.44
DEPDC1-204ENST00000489862 SOX11P35716 441 aa6.08□□□□□ -1.44
DEPDC1-204ENST00000489862 DCAF11Q8TEB1 546 aa6.08□□□□□ -1.44
DEPDC1-204ENST00000489862 EFCC1Q9HA90 598 aa6.08□□□□□ -1.44
DEPDC1-204ENST00000489862 ZNF865P0CJ78 1059 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 ITGB5P18084 799 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 GDF10P55107 478 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 ZNF648Q5T619 568 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 LILRA6Q6PI73 481 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 BHMTQ93088 406 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 DBNDD2Q9BQY9 259 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 ALG2Q9H553 416 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 RAD21O60216 631 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 UBTFP17480 764 aaKnown RBP6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 FLIIQ13045 1269 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 ZNF124Q15973 351 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 MAP7D1Q3KQU3 841 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 KCNH4Q9UQ05 1017 aa6.07□□□□□ -1.44
DEPDC1-204ENST00000489862 POM121CA8CG34 1229 aa6.06□□□□□ -1.44
DEPDC1-204ENST00000489862 F8W735 103 aaPredicted RBP6.06□□□□□ -1.44
DEPDC1-204ENST00000489862 SCNN1DP51172 638 aa6.06□□□□□ -1.44
DEPDC1-204ENST00000489862 TMEM132AQ24JP5 1023 aa6.06□□□□□ -1.44
DEPDC1-204ENST00000489862 CBLL1Q75N03 491 aa6.06□□□□□ -1.44
DEPDC1-204ENST00000489862 PRR19A6NJB7 356 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 ALX3O95076 343 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 SKIP12755 728 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 GLB1P16278 677 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 KCNQ4P56696 695 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 PCSK7Q16549 785 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 WWC1Q8IX03 1113 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 ZNF295-AS1Q8N0V1 137 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 BRD7Q9NPI1 651 aa6.05□□□□□ -1.44
DEPDC1-204ENST00000489862 DLL1O00548 723 aa6.04□□□□□ -1.44
DEPDC1-204ENST00000489862 RNF43Q68DV7 783 aa6.04□□□□□ -1.44
DEPDC1-204ENST00000489862 FBXL18Q96ME1 805 aa6.04□□□□□ -1.44
DEPDC1-204ENST00000489862 A6NJY4 79 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 Q6ZS46 218 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 ADAMTS19Q8TE59 1207 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 DNAJB12Q9NXW2 375 aaKnown RBP6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 FARP2O94887 1054 aaPredicted RBP6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 TXLNAP40222 546 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 MTFR1Q15390 333 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 CLUAP1Q96AJ1 413 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 FRRS1LQ9P0K9 344 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 SERTAD1Q9UHV2 236 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 IQSEC3Q9UPP2 1182 aaPredicted RBP6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 PCDHGA11Q9Y5H2 935 aa6.03□□□□□ -1.44
DEPDC1-204ENST00000489862 TMEM229AB2RXF0 380 aa6.02□□□□□ -1.45
DEPDC1-204ENST00000489862 NCOA4Q13772 614 aa6.02□□□□□ -1.45
DEPDC1-204ENST00000489862 EML3Q32P44 896 aa6.02□□□□□ -1.45
DEPDC1-204ENST00000489862 DEPDC4Q8N2C3 294 aa6.02□□□□□ -1.45
DEPDC1-204ENST00000489862 ANKIB1Q9P2G1 1089 aa6.02□□□□□ -1.45
DEPDC1-204ENST00000489862 HDGFL1Q5TGJ6 251 aa6.01□□□□□ -1.45
DEPDC1-204ENST00000489862 SLC4A9Q96Q91 983 aa6.01□□□□□ -1.45
DEPDC1-204ENST00000489862 KSR1Q8IVT5 923 aa6□□□□□ -1.45
DEPDC1-204ENST00000489862 CEP41Q9BYV8 373 aa6□□□□□ -1.45
DEPDC1-204ENST00000489862 NOD1Q9Y239 953 aa6□□□□□ -1.45
DEPDC1-204ENST00000489862 PARP3Q9Y6F1 533 aa6□□□□□ -1.45
DEPDC1-204ENST00000489862 USP17L5A8MUK1 530 aa5.99□□□□□ -1.45
DEPDC1-204ENST00000489862 EML1O00423 815 aa5.99□□□□□ -1.45
DEPDC1-204ENST00000489862 DEAF1O75398 565 aaPredicted RBP5.99□□□□□ -1.45
DEPDC1-204ENST00000489862 GTF2IP78347 998 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms