RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 FSD2A1L4K1 749 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 IL2RBP14784 551 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 MYD88Q99836 296 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 COPRSQ9NQ92 184 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 AK9Q5TCS8 1911 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 SASH1O94885 1247 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 SSFA2P28290 1259 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 RABL6Q3YEC7 729 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-209ENST00000489419 LAMB4A4D0S4 1761 aa10.69□□□□□ -0.7
CSMD2-209ENST00000489419 BAG4O95429 457 aaKnown RBP10.68□□□□□ -0.7
CSMD2-209ENST00000489419 TMX3Q96JJ7 454 aa10.68□□□□□ -0.7
CSMD2-209ENST00000489419 LSG1Q9H089 658 aaKnown RBP10.68□□□□□ -0.7
CSMD2-209ENST00000489419 PA2G4Q9UQ80 394 aaKnown RBP10.68□□□□□ -0.7
CSMD2-209ENST00000489419 GOLGA6L3A6NEY3 463 aa10.68□□□□□ -0.7
CSMD2-209ENST00000489419 AACSQ86V21 672 aa10.68□□□□□ -0.7
CSMD2-209ENST00000489419 CNPY4Q8N129 248 aa10.68□□□□□ -0.7
CSMD2-209ENST00000489419 DIAPH3Q9NSV4 1193 aa10.68□□□□□ -0.7
CSMD2-209ENST00000489419 PALD1Q9ULE6 856 aa10.68□□□□□ -0.7
CSMD2-209ENST00000489419 GLI3P10071 1580 aa10.67□□□□□ -0.7
CSMD2-209ENST00000489419 KCNB2Q92953 911 aa10.67□□□□□ -0.7
CSMD2-209ENST00000489419 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
CSMD2-209ENST00000489419 EAF2Q96CJ1 260 aaPredicted RBP10.67□□□□□ -0.7
CSMD2-209ENST00000489419 MAP4K4O95819 1239 aaPredicted RBP10.66□□□□□ -0.7
CSMD2-209ENST00000489419 CASP7P55210 303 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 TICAM2Q86XR7 235 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 UBR2Q8IWV8 1755 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 ZNF335Q9H4Z2 1342 aaPredicted RBP10.66□□□□□ -0.7
CSMD2-209ENST00000489419 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 H7C1W4 665 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 RFX5P48382 616 aaPredicted RBP10.66□□□□□ -0.7
CSMD2-209ENST00000489419 TM6SF1Q9BZW5 370 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 IL25Q9H293 177 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 ABCA3Q99758 1704 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 TNS2Q63HR2 1409 aa10.66□□□□□ -0.7
CSMD2-209ENST00000489419 SLC34A2O95436 690 aa10.65□□□□□ -0.7
CSMD2-209ENST00000489419 EVA1CP58658 441 aa10.65□□□□□ -0.7
CSMD2-209ENST00000489419 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
CSMD2-209ENST00000489419 EPHA10Q5JZY3 1008 aa10.65□□□□□ -0.7
CSMD2-209ENST00000489419 CWC27Q6UX04 472 aaKnown RBP10.65□□□□□ -0.7
CSMD2-209ENST00000489419 ZGPATQ8N5A5 531 aaKnown RBP10.65□□□□□ -0.7
CSMD2-209ENST00000489419 ZNF830Q96NB3 372 aaPredicted RBP10.65□□□□□ -0.7
CSMD2-209ENST00000489419 TEX13AQ9BXU3 409 aaPredicted RBP10.65□□□□□ -0.7
CSMD2-209ENST00000489419 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
CSMD2-209ENST00000489419 PAPPAQ13219 1627 aa10.65□□□□□ -0.7
CSMD2-209ENST00000489419 NHSL1Q5SYE7 1610 aa10.65□□□□□ -0.7
CSMD2-209ENST00000489419 A0A087WZG4 1122 aa10.65□□□□□ -0.71
CSMD2-209ENST00000489419 NBPF26B4DH59 902 aa10.65□□□□□ -0.71
CSMD2-209ENST00000489419 MRE11P49959 708 aa10.65□□□□□ -0.71
CSMD2-209ENST00000489419 PTPN12Q05209 780 aaKnown RBP10.65□□□□□ -0.71
CSMD2-209ENST00000489419 NBPF14Q5TI25 921 aa10.65□□□□□ -0.71
CSMD2-209ENST00000489419 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.71
CSMD2-209ENST00000489419 NBPF15Q8N660 670 aa10.65□□□□□ -0.71
CSMD2-209ENST00000489419 KCPQ6ZWJ8 1503 aa10.65□□□□□ -0.71
CSMD2-209ENST00000489419 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.71
CSMD2-209ENST00000489419 ATP5JP18859 108 aa10.64□□□□□ -0.71
CSMD2-209ENST00000489419 NCLP19338 710 aaKnown RBP10.64□□□□□ -0.71
CSMD2-209ENST00000489419 CCDC191Q8NCU4 936 aa10.64□□□□□ -0.71
CSMD2-209ENST00000489419 KCNG1Q9UIX4 513 aa10.64□□□□□ -0.71
CSMD2-209ENST00000489419 UBE3BQ7Z3V4 1068 aa10.64□□□□□ -0.71
CSMD2-209ENST00000489419 TTC14Q96N46 770 aa10.64□□□□□ -0.71
CSMD2-209ENST00000489419 CWC25Q9NXE8 425 aaPredicted RBP10.64□□□□□ -0.71
CSMD2-209ENST00000489419 RFX7Q2KHR2 1363 aa10.63□□□□□ -0.71
CSMD2-209ENST00000489419 BRD1O95696 1058 aa10.63□□□□□ -0.71
CSMD2-209ENST00000489419 CCDC8Q9H0W5 538 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-209ENST00000489419 GZF1Q9H116 711 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-209ENST00000489419 GPR108Q9NPR9 543 aa10.63□□□□□ -0.71
CSMD2-209ENST00000489419 ATG3Q9NT62 314 aa10.63□□□□□ -0.71
CSMD2-209ENST00000489419 ZDHHC9Q9Y397 364 aa10.63□□□□□ -0.71
CSMD2-209ENST00000489419 AFDNP55196 1824 aaKnown RBP10.63□□□□□ -0.71
CSMD2-209ENST00000489419 MAP4K1Q92918 833 aa10.63□□□□□ -0.71
CSMD2-209ENST00000489419 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
CSMD2-209ENST00000489419 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 NECTIN1Q15223 517 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 TNNI3KQ59H18 835 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 ZSCAN31Q96LW9 406 aaPredicted RBP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 UPF3BQ9BZI7 483 aaKnown RBP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 SIL1Q9H173 461 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 LMBRD1Q9NUN5 540 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 FPGT-TNNI3KV9GXZ4 949 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 CCDC171Q6TFL3 1326 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 SHANK3Q9BYB0 1731 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 ATP5J2-PTCD1G3V325 749 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 PTCD1O75127 700 aaKnown RBP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 XRCC6P12956 609 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 ZKSCAN1P17029 563 aaPredicted RBP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 FOXO4P98177 505 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 DDX54Q8TDD1 881 aaKnown RBP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 PDCL3Q9H2J4 239 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
CSMD2-209ENST00000489419 DDX49Q9Y6V7 483 aaKnown RBP10.62□□□□□ -0.71
CSMD2-209ENST00000489419 PIP4K2AP48426 406 aaPredicted RBP10.61□□□□□ -0.71
CSMD2-209ENST00000489419 MCTP1Q6DN14 999 aa10.61□□□□□ -0.71
CSMD2-209ENST00000489419 STRN4Q9NRL3 753 aa10.61□□□□□ -0.71
CSMD2-209ENST00000489419 TMEM51Q9NW97 253 aa10.61□□□□□ -0.71
CSMD2-209ENST00000489419 TMOD3Q9NYL9 352 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms