RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 SLC39A6Q13433 755 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 INTS5Q6P9B9 1019 aaKnown RBP6.68□□□□□ -1.34
PRDM1-207ENST00000489365 ZNF790Q6PG37 636 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 KHSRPQ92945 711 aaKnown RBP eCLIP6.68□□□□□ -1.34
PRDM1-207ENST00000489365 MARVELD3Q96A59 401 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 SLC4A9Q96Q91 983 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 LGR6Q9HBX8 967 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 SRP68Q9UHB9 627 aaKnown RBP6.68□□□□□ -1.34
PRDM1-207ENST00000489365 NARFQ9UHQ1 456 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 SOS1Q07889 1333 aaPredicted RBP6.68□□□□□ -1.34
PRDM1-207ENST00000489365 H0YIN7 160 aa6.67□□□□□ -1.34
PRDM1-207ENST00000489365 PDE6BP35913 854 aa6.67□□□□□ -1.34
PRDM1-207ENST00000489365 ST5P78524 1137 aa6.67□□□□□ -1.34
PRDM1-207ENST00000489365 SETDB2Q96T68 719 aa6.67□□□□□ -1.34
PRDM1-207ENST00000489365 MAPK8IP3Q9UPT6 1336 aa6.67□□□□□ -1.34
PRDM1-207ENST00000489365 ZNF316A6NFI3 1004 aaPredicted RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 POLRMTO00411 1230 aaKnown RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 HTATSF1O43719 755 aaKnown RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 NUDT7P0C024 238 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 HOXB1P14653 301 aaPredicted RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 HSPA6P17066 643 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 IL6STP40189 918 aaPredicted RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 EMP3P54852 163 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 SOGA3Q5TF21 947 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 C9orf131Q5VYM1 1079 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 BICDL1Q6ZP65 573 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 PNISRQ8TF01 805 aaKnown RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 RNF181Q9P0P0 153 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 ZBTB1Q9Y2K1 713 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 ZC3H4Q9UPT8 1303 aaKnown RBP6.66□□□□□ -1.34
PRDM1-207ENST00000489365 ADCY9O60503 1353 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 CARMIL3Q8ND23 1372 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 HEG1Q9ULI3 1381 aa6.66□□□□□ -1.34
PRDM1-207ENST00000489365 TJP1Q07157 1748 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 KIF13BQ9NQT8 1826 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 TOMM70O94826 608 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 SERPINB2P05120 415 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 SNRPA1P09661 255 aaKnown RBP6.65□□□□□ -1.34
PRDM1-207ENST00000489365 GTF2E1P29083 439 aaPredicted RBP6.65□□□□□ -1.34
PRDM1-207ENST00000489365 TM4SF1P30408 202 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 APLP1P51693 650 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 DDR1Q08345 913 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 NFIXQ14938 502 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 C2CD5Q86YS7 1000 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 CNBD1Q8NA66 436 aa6.65□□□□□ -1.34
PRDM1-207ENST00000489365 ZNF622Q969S3 477 aaKnown RBP eCLIP6.65□□□□□ -1.34
PRDM1-207ENST00000489365 ZNF496Q96IT1 587 aaPredicted RBP6.65□□□□□ -1.34
PRDM1-207ENST00000489365 N4BP2Q86UW6 1770 aaPredicted RBP6.64□□□□□ -1.35
PRDM1-207ENST00000489365 MYH14Q7Z406 1995 aaKnown RBP6.64□□□□□ -1.35
PRDM1-207ENST00000489365 LMNB1P20700 586 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 PPP2R1AP30153 589 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 CHRNA5P30532 468 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 EIF5P55010 431 aaKnown RBP6.64□□□□□ -1.35
PRDM1-207ENST00000489365 NBPF5PQ86XG9 351 aaPredicted RBP6.64□□□□□ -1.35
PRDM1-207ENST00000489365 DZIP3Q86Y13 1208 aaKnown RBP6.64□□□□□ -1.35
PRDM1-207ENST00000489365 IL17REQ8NFR9 667 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 CNKSR1Q969H4 720 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 BRIP1Q9BX63 1249 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 RSPH6AQ9H0K4 717 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 TMX4Q9H1E5 349 aaPredicted RBP6.64□□□□□ -1.35
PRDM1-207ENST00000489365 KCPQ6ZWJ8 1503 aa6.64□□□□□ -1.35
PRDM1-207ENST00000489365 COL3A1P02461 1466 aaPredicted RBP6.63□□□□□ -1.35
PRDM1-207ENST00000489365 LMOD3Q0VAK6 560 aa6.63□□□□□ -1.35
PRDM1-207ENST00000489365 FSTL1Q12841 308 aa6.63□□□□□ -1.35
PRDM1-207ENST00000489365 TAF7Q15545 349 aaPredicted RBP6.63□□□□□ -1.35
PRDM1-207ENST00000489365 CLEC4GQ6UXB4 293 aa6.63□□□□□ -1.35
PRDM1-207ENST00000489365 KIF6Q6ZMV9 814 aa6.63□□□□□ -1.35
PRDM1-207ENST00000489365 RBM46Q8TBY0 533 aaKnown RBP6.63□□□□□ -1.35
PRDM1-207ENST00000489365 CEMIPQ8WUJ3 1361 aa6.63□□□□□ -1.35
PRDM1-207ENST00000489365 DDX12PQ92771 950 aa6.63□□□□□ -1.35
PRDM1-207ENST00000489365 TBC1D2BQ9UPU7 963 aa6.63□□□□□ -1.35
PRDM1-207ENST00000489365 VIRMAQ69YN4 1812 aaKnown RBP6.62□□□□□ -1.35
PRDM1-207ENST00000489365 ARFGEF1Q9Y6D6 1849 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 GRXCR2A6NFK2 248 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 A1BGP04217 495 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 TBC1D9BQ66K14 1250 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 SMYD5Q6GMV2 418 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 TPTE2Q6XPS3 522 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRDM1-207ENST00000489365 MCM10Q7L590 875 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 SMC1BQ8NDV3 1235 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 NYXQ9GZU5 481 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 LHX6Q9UPM6 363 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 UBR2Q8IWV8 1755 aa6.62□□□□□ -1.35
PRDM1-207ENST00000489365 ADAMTS7Q9UKP4 1686 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 VEGFAP15692 232 aaPredicted RBP6.61□□□□□ -1.35
PRDM1-207ENST00000489365 KCNA3P22001 575 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 OSBPP22059 807 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 RALBP1Q15311 655 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 ERFEQ4G0M1 354 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 STYK1Q6J9G0 422 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 MASTLQ96GX5 879 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 PHACTR3Q96KR7 559 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 HS3ST6Q96QI5 342 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 TAOK3Q9H2K8 898 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 NMRK2Q9NPI5 230 aa6.61□□□□□ -1.35
PRDM1-207ENST00000489365 NIP7Q9Y221 180 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRDM1-207ENST00000489365 BRCA1P38398 1863 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms