RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CBLL1Q75N03 491 aa5.61□□□□□ -1.51
PRPF4-203ENST00000488937 ZDHHC3Q9NYG2 299 aa5.61□□□□□ -1.51
PRPF4-203ENST00000488937 IGSF3O75054 1194 aa5.6□□□□□ -1.51
PRPF4-203ENST00000488937 NEUROD1Q13562 356 aa5.6□□□□□ -1.51
PRPF4-203ENST00000488937 ZNF648Q5T619 568 aaPredicted RBP5.6□□□□□ -1.51
PRPF4-203ENST00000488937 DTWD1Q8N5C7 304 aa5.6□□□□□ -1.51
PRPF4-203ENST00000488937 ETNK1Q9HBU6 452 aa5.6□□□□□ -1.51
PRPF4-203ENST00000488937 RAD21O60216 631 aa5.59□□□□□ -1.51
PRPF4-203ENST00000488937 IGF2-ASQ6U949 168 aa5.59□□□□□ -1.51
PRPF4-203ENST00000488937 GJD4Q96KN9 370 aaPredicted RBP5.59□□□□□ -1.51
PRPF4-203ENST00000488937 DOLKQ9UPQ8 538 aa5.59□□□□□ -1.51
PRPF4-203ENST00000488937 SHROOM4Q9ULL8 1493 aa5.58□□□□□ -1.52
PRPF4-203ENST00000488937 FBXO11Q86XK2 927 aa5.58□□□□□ -1.52
PRPF4-203ENST00000488937 RAXQ9Y2V3 346 aa5.58□□□□□ -1.52
PRPF4-203ENST00000488937 DMRTC2Q8IXT2 367 aaPredicted RBP5.57□□□□□ -1.52
PRPF4-203ENST00000488937 MTMR14Q8NCE2 650 aa5.57□□□□□ -1.52
PRPF4-203ENST00000488937 CLUAP1Q96AJ1 413 aa5.57□□□□□ -1.52
PRPF4-203ENST00000488937 CCDC85AQ96PX6 553 aaPredicted RBP5.57□□□□□ -1.52
PRPF4-203ENST00000488937 CDCA7Q9BWT1 371 aaPredicted RBP5.57□□□□□ -1.52
PRPF4-203ENST00000488937 JPH1Q9HDC5 661 aaPredicted RBP5.57□□□□□ -1.52
PRPF4-203ENST00000488937 CEP126Q9P2H0 1117 aa5.57□□□□□ -1.52
PRPF4-203ENST00000488937 NDUFB9Q9Y6M9 179 aa5.57□□□□□ -1.52
PRPF4-203ENST00000488937 INHAP05111 366 aa5.56□□□□□ -1.52
PRPF4-203ENST00000488937 AFF1P51825 1210 aaKnown RBP5.56□□□□□ -1.52
PRPF4-203ENST00000488937 BICDL1Q6ZP65 573 aa5.56□□□□□ -1.52
PRPF4-203ENST00000488937 SNRKQ9NRH2 765 aa5.56□□□□□ -1.52
PRPF4-203ENST00000488937 PRR19A6NJB7 356 aa5.55□□□□□ -1.52
PRPF4-203ENST00000488937 GPR37L1O60883 481 aa5.55□□□□□ -1.52
PRPF4-203ENST00000488937 SMTNP53814 917 aa5.55□□□□□ -1.52
PRPF4-203ENST00000488937 PKN1Q16512 942 aa5.55□□□□□ -1.52
PRPF4-203ENST00000488937 MTMR7Q9Y216 660 aa5.55□□□□□ -1.52
PRPF4-203ENST00000488937 GPC6Q9Y625 555 aaPredicted RBP5.55□□□□□ -1.52
PRPF4-203ENST00000488937 GDF10P55107 478 aa5.54□□□□□ -1.52
PRPF4-203ENST00000488937 MCM6Q14566 821 aa5.54□□□□□ -1.52
PRPF4-203ENST00000488937 SLFNL1Q499Z3 407 aa5.54□□□□□ -1.52
PRPF4-203ENST00000488937 FNBP4Q8N3X1 1017 aaPredicted RBP5.54□□□□□ -1.52
PRPF4-203ENST00000488937 SLC30A3Q99726 388 aa5.54□□□□□ -1.52
PRPF4-203ENST00000488937 AKTIPQ9H8T0 292 aa5.54□□□□□ -1.52
PRPF4-203ENST00000488937 NEUROD4Q9HD90 331 aa5.54□□□□□ -1.52
PRPF4-203ENST00000488937 STOML1Q9UBI4 398 aa5.54□□□□□ -1.52
PRPF4-203ENST00000488937 CDK2AP1O14519 115 aa5.53□□□□□ -1.52
PRPF4-203ENST00000488937 EIF4G2P78344 907 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRPF4-203ENST00000488937 TMCO4Q5TGY1 634 aa5.53□□□□□ -1.52
PRPF4-203ENST00000488937 CSRNP1Q96S65 589 aa5.53□□□□□ -1.52
PRPF4-203ENST00000488937 SERPINA10Q9UK55 444 aa5.53□□□□□ -1.52
PRPF4-203ENST00000488937 MFAP1P55081 439 aaKnown RBP5.52□□□□□ -1.53
PRPF4-203ENST00000488937 NFIAQ12857 509 aa5.52□□□□□ -1.53
PRPF4-203ENST00000488937 OXLD1Q5BKU9 147 aa5.52□□□□□ -1.53
PRPF4-203ENST00000488937 CABP1Q9NZU7 370 aa5.52□□□□□ -1.53
PRPF4-203ENST00000488937 SCNN1DP51172 638 aa5.51□□□□□ -1.53
PRPF4-203ENST00000488937 PROSER2Q86WR7 435 aaPredicted RBP5.51□□□□□ -1.53
PRPF4-203ENST00000488937 AEBP1Q8IUX7 1158 aa5.51□□□□□ -1.53
PRPF4-203ENST00000488937 TMEM130Q8N3G9 435 aa5.51□□□□□ -1.53
PRPF4-203ENST00000488937 NUDT8Q8WV74 236 aa5.51□□□□□ -1.53
PRPF4-203ENST00000488937 A6NJY4 79 aa5.5□□□□□ -1.53
PRPF4-203ENST00000488937 MTFR1Q15390 333 aa5.5□□□□□ -1.53
PRPF4-203ENST00000488937 MAP7D1Q3KQU3 841 aa5.5□□□□□ -1.53
PRPF4-203ENST00000488937 RETREG2Q8NC44 543 aa5.5□□□□□ -1.53
PRPF4-203ENST00000488937 SLC4A9Q96Q91 983 aa5.5□□□□□ -1.53
PRPF4-203ENST00000488937 BACH1O14867 736 aa5.49□□□□□ -1.53
PRPF4-203ENST00000488937 PSPNO60542 156 aa5.49□□□□□ -1.53
PRPF4-203ENST00000488937 FARP2O94887 1054 aaPredicted RBP5.49□□□□□ -1.53
PRPF4-203ENST00000488937 SPEM2Q0P670 501 aa5.49□□□□□ -1.53
PRPF4-203ENST00000488937 IRF5Q13568 498 aa5.49□□□□□ -1.53
PRPF4-203ENST00000488937 MSL1Q68DK7 614 aa5.49□□□□□ -1.53
PRPF4-203ENST00000488937 Q6ZS46 218 aa5.49□□□□□ -1.53
PRPF4-203ENST00000488937 PRM3Q9NNZ6 103 aa5.49□□□□□ -1.53
PRPF4-203ENST00000488937 ANGEL1Q9UNK9 670 aaKnown RBP5.49□□□□□ -1.53
PRPF4-203ENST00000488937 STAU1O95793 577 aaKnown RBP5.48□□□□□ -1.53
PRPF4-203ENST00000488937 ZNF295-AS1Q8N0V1 137 aa5.48□□□□□ -1.53
PRPF4-203ENST00000488937 PHTF2Q8N3S3 785 aa5.48□□□□□ -1.53
PRPF4-203ENST00000488937 FOXD4L4Q8WXT5 416 aaPredicted RBP5.48□□□□□ -1.53
PRPF4-203ENST00000488937 ZNF428Q96B54 188 aa5.48□□□□□ -1.53
PRPF4-203ENST00000488937 CCDC97Q96F63 343 aaPredicted RBP5.48□□□□□ -1.53
PRPF4-203ENST00000488937 GZF1Q9H116 711 aaPredicted RBP5.48□□□□□ -1.53
PRPF4-203ENST00000488937 EFCC1Q9HA90 598 aa5.48□□□□□ -1.53
PRPF4-203ENST00000488937 RAPGEFL1Q9UHV5 662 aa5.48□□□□□ -1.53
PRPF4-203ENST00000488937 ZNF777Q9ULD5 760 aaPredicted RBP5.48□□□□□ -1.53
PRPF4-203ENST00000488937 IQSEC3Q9UPP2 1182 aaPredicted RBP5.48□□□□□ -1.53
PRPF4-203ENST00000488937 TBC1D2BQ9UPU7 963 aa5.48□□□□□ -1.53
PRPF4-203ENST00000488937 ALX3O95076 343 aa5.47□□□□□ -1.53
PRPF4-203ENST00000488937 LRRC69Q6ZNQ3 347 aa5.47□□□□□ -1.53
PRPF4-203ENST00000488937 DBNDD2Q9BQY9 259 aa5.47□□□□□ -1.53
PRPF4-203ENST00000488937 SERTAD1Q9UHV2 236 aa5.47□□□□□ -1.53
PRPF4-203ENST00000488937 CHIC2Q9UKJ5 165 aa5.47□□□□□ -1.53
PRPF4-203ENST00000488937 SLC6A14Q9UN76 642 aa5.47□□□□□ -1.53
PRPF4-203ENST00000488937 COG6Q9Y2V7 657 aa5.47□□□□□ -1.53
PRPF4-203ENST00000488937 F8W735 103 aaPredicted RBP5.46□□□□□ -1.54
PRPF4-203ENST00000488937 DHX15O43143 795 aaKnown RBP5.46□□□□□ -1.54
PRPF4-203ENST00000488937 RBM25P49756 843 aaKnown RBP5.46□□□□□ -1.54
PRPF4-203ENST00000488937 SFSWAPQ12872 951 aaKnown RBP5.46□□□□□ -1.54
PRPF4-203ENST00000488937 RNF43Q68DV7 783 aa5.46□□□□□ -1.54
PRPF4-203ENST00000488937 PSAPL1Q6NUJ1 521 aa5.46□□□□□ -1.54
PRPF4-203ENST00000488937 ANKIB1Q9P2G1 1089 aa5.46□□□□□ -1.54
PRPF4-203ENST00000488937 DLL1O00548 723 aa5.45□□□□□ -1.54
PRPF4-203ENST00000488937 RGS9O75916 674 aaPredicted RBP5.45□□□□□ -1.54
PRPF4-203ENST00000488937 RAB44Q7Z6P3 723 aaPredicted RBP5.45□□□□□ -1.54
PRPF4-203ENST00000488937 FBXL18Q96ME1 805 aa5.45□□□□□ -1.54
PRPF4-203ENST00000488937 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
PRPF4-203ENST00000488937 GDPD2Q9HCC8 539 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms