RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 YBX3P16989 372 aaKnown RBP eCLIP23.9■■□□□ 1.42
PTCD3-217ENST00000488801 CCDC24Q8N4L8 307 aa23.9■■□□□ 1.42
PTCD3-217ENST00000488801 METTL22Q9BUU2 404 aaPredicted RBP23.9■■□□□ 1.42
PTCD3-217ENST00000488801 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
PTCD3-217ENST00000488801 CHRNA5P30532 468 aa23.89■■□□□ 1.41
PTCD3-217ENST00000488801 PPP1R42Q7Z4L9 355 aa23.89■■□□□ 1.41
PTCD3-217ENST00000488801 RIC3Q7Z5B4 369 aa23.89■■□□□ 1.41
PTCD3-217ENST00000488801 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
PTCD3-217ENST00000488801 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.41
PTCD3-217ENST00000488801 LRRC37AA6NMS7 1700 aa23.88■■□□□ 1.41
PTCD3-217ENST00000488801 PDE6BP35913 854 aa23.88■■□□□ 1.41
PTCD3-217ENST00000488801 ALDH1L2Q3SY69 923 aa23.88■■□□□ 1.41
PTCD3-217ENST00000488801 NUTM1Q86Y26 1132 aa23.88■■□□□ 1.41
PTCD3-217ENST00000488801 MRPL50Q8N5N7 158 aaKnown RBP23.88■■□□□ 1.41
PTCD3-217ENST00000488801 MAP3K2Q9Y2U5 619 aa23.88■■□□□ 1.41
PTCD3-217ENST00000488801 CRY2Q49AN0 593 aa23.87■■□□□ 1.41
PTCD3-217ENST00000488801 ERFEQ4G0M1 354 aa23.87■■□□□ 1.41
PTCD3-217ENST00000488801 SSH1Q8WYL5 1049 aa23.87■■□□□ 1.41
PTCD3-217ENST00000488801 UTP14AQ9BVJ6 771 aaKnown RBP23.87■■□□□ 1.41
PTCD3-217ENST00000488801 FAM177BA6PVY3 158 aa23.86■■□□□ 1.41
PTCD3-217ENST00000488801 SLC10A5Q5PT55 438 aa23.86■■□□□ 1.41
PTCD3-217ENST00000488801 SPEF2Q9C093 1822 aa23.86■■□□□ 1.41
PTCD3-217ENST00000488801 ATP5J2-PTCD1G3V325 749 aa23.85■■□□□ 1.41
PTCD3-217ENST00000488801 IGKV5-2P06315 115 aa23.85■■□□□ 1.41
PTCD3-217ENST00000488801 SRGNP10124 158 aa23.85■■□□□ 1.41
PTCD3-217ENST00000488801 BRPF1P55201 1214 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-217ENST00000488801 FKBP5Q13451 457 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-217ENST00000488801 C2CD5Q86YS7 1000 aa23.85■■□□□ 1.41
PTCD3-217ENST00000488801 MYD88Q99836 296 aa23.85■■□□□ 1.41
PTCD3-217ENST00000488801 CCDC191Q8NCU4 936 aa23.84■■□□□ 1.41
PTCD3-217ENST00000488801 PIM2Q9P1W9 311 aa23.84■■□□□ 1.41
PTCD3-217ENST00000488801 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
PTCD3-217ENST00000488801 COL4A1P02462 1669 aa23.83■■□□□ 1.41
PTCD3-217ENST00000488801 H0YIN7 160 aa23.83■■□□□ 1.41
PTCD3-217ENST00000488801 NPHP1O15259 732 aa23.83■■□□□ 1.41
PTCD3-217ENST00000488801 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
PTCD3-217ENST00000488801 STYK1Q6J9G0 422 aa23.82■■□□□ 1.4
PTCD3-217ENST00000488801 C3orf67Q6ZVT6 689 aa23.81■■□□□ 1.4
PTCD3-217ENST00000488801 SYNE4Q8N205 404 aa23.81■■□□□ 1.4
PTCD3-217ENST00000488801 TRMT112Q9UI30 125 aaKnown RBP23.81■■□□□ 1.4
PTCD3-217ENST00000488801 PTPRCP08575 1304 aa23.81■■□□□ 1.4
PTCD3-217ENST00000488801 A0A1B0GUL6 1792 aa23.8■■□□□ 1.4
PTCD3-217ENST00000488801 NEURL1BA8MQ27 555 aa23.8■■□□□ 1.4
PTCD3-217ENST00000488801 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
PTCD3-217ENST00000488801 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
PTCD3-217ENST00000488801 GPR162Q16538 588 aa23.8■■□□□ 1.4
PTCD3-217ENST00000488801 TIAM2Q8IVF5 1701 aa23.8■■□□□ 1.4
PTCD3-217ENST00000488801 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
PTCD3-217ENST00000488801 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
PTCD3-217ENST00000488801 SNED1Q8TER0 1413 aa23.79■■□□□ 1.4
PTCD3-217ENST00000488801 DALRD3Q5D0E6 543 aaKnown RBP23.79■■□□□ 1.4
PTCD3-217ENST00000488801 ZBTB38Q8NAP3 1195 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-217ENST00000488801 BCL2L13Q9BXK5 485 aa23.79■■□□□ 1.4
PTCD3-217ENST00000488801 CWC25Q9NXE8 425 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-217ENST00000488801 WWC3Q9ULE0 1092 aa23.79■■□□□ 1.4
PTCD3-217ENST00000488801 F6X3S4 739 aa23.78■■□□□ 1.4
PTCD3-217ENST00000488801 GRIN3BO60391 1043 aa23.78■■□□□ 1.4
PTCD3-217ENST00000488801 PCCAP05165 728 aaPredicted RBP23.78■■□□□ 1.4
PTCD3-217ENST00000488801 NPR1P16066 1061 aa23.78■■□□□ 1.4
PTCD3-217ENST00000488801 HOXA10P31260 410 aaPredicted RBP23.78■■□□□ 1.4
PTCD3-217ENST00000488801 NEXNQ0ZGT2 675 aa23.78■■□□□ 1.4
PTCD3-217ENST00000488801 CWF19L2Q2TBE0 894 aaKnown RBP23.78■■□□□ 1.4
PTCD3-217ENST00000488801 LINS1Q8NG48 757 aa23.78■■□□□ 1.4
PTCD3-217ENST00000488801 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
PTCD3-217ENST00000488801 CDHR2Q9BYE9 1310 aa23.78■■□□□ 1.4
PTCD3-217ENST00000488801 BEND3Q5T5X7 828 aa23.77■■□□□ 1.4
PTCD3-217ENST00000488801 TTLL6Q8N841 843 aa23.77■■□□□ 1.4
PTCD3-217ENST00000488801 FAM89AQ96GI7 184 aa23.77■■□□□ 1.4
PTCD3-217ENST00000488801 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
PTCD3-217ENST00000488801 DCAF8L1A6NGE4 600 aa23.76■■□□□ 1.39
PTCD3-217ENST00000488801 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
PTCD3-217ENST00000488801 HCLS1P14317 486 aaPredicted RBP23.75■■□□□ 1.39
PTCD3-217ENST00000488801 GCKRQ14397 625 aa23.75■■□□□ 1.39
PTCD3-217ENST00000488801 CNKSR1Q969H4 720 aa23.75■■□□□ 1.39
PTCD3-217ENST00000488801 CASP7P55210 303 aa23.74■■□□□ 1.39
PTCD3-217ENST00000488801 PRPF40BQ6NWY9 871 aaKnown RBP23.74■■□□□ 1.39
PTCD3-217ENST00000488801 ZNF622Q969S3 477 aaKnown RBP eCLIP23.74■■□□□ 1.394e-10■□□□□ 9.7
PTCD3-217ENST00000488801 NLRP3Q96P20 1036 aa23.74■■□□□ 1.39
PTCD3-217ENST00000488801 C7orf43Q8WVR3 580 aa23.73■■□□□ 1.39
PTCD3-217ENST00000488801 KIF16BQ96L93 1317 aa23.73■■□□□ 1.39
PTCD3-217ENST00000488801 H7C1W4 665 aa23.72■■□□□ 1.39
PTCD3-217ENST00000488801 IRS4O14654 1257 aaPredicted RBP23.72■■□□□ 1.39
PTCD3-217ENST00000488801 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
PTCD3-217ENST00000488801 CRAMP1Q96RY5 1269 aa23.72■■□□□ 1.39
PTCD3-217ENST00000488801 ALDH1L1O75891 902 aa23.71■■□□□ 1.39
PTCD3-217ENST00000488801 ABCC4O15439 1325 aa23.7■■□□□ 1.38
PTCD3-217ENST00000488801 DUOX1Q9NRD9 1551 aa23.69■■□□□ 1.38
PTCD3-217ENST00000488801 ALDH1B1P30837 517 aa23.69■■□□□ 1.38
PTCD3-217ENST00000488801 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
PTCD3-217ENST00000488801 ARHGAP45Q92619 1136 aa23.69■■□□□ 1.38
PTCD3-217ENST00000488801 RPGRQ92834 1020 aaKnown RBP23.69■■□□□ 1.38
PTCD3-217ENST00000488801 PLA2G12BQ9BX93 195 aa23.69■■□□□ 1.38
PTCD3-217ENST00000488801 RTL9Q8NET4 1388 aa23.68■■□□□ 1.38
PTCD3-217ENST00000488801 SRCIN1Q9C0H9 1055 aa23.68■■□□□ 1.38
PTCD3-217ENST00000488801 NOB1Q9ULX3 412 aaKnown RBP23.68■■□□□ 1.38
PTCD3-217ENST00000488801 UTYO14607 1347 aa23.67■■□□□ 1.38
PTCD3-217ENST00000488801 PDE8AO60658 829 aa23.67■■□□□ 1.38
PTCD3-217ENST00000488801 BCAR3O75815 825 aa23.67■■□□□ 1.38
PTCD3-217ENST00000488801 HSP90B1P14625 803 aaKnown RBP23.67■■□□□ 1.38
PTCD3-217ENST00000488801 UBE3BQ7Z3V4 1068 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms