RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 RTL5Q5HYW3 569 aaPredicted RBP8.43□□□□□ -1.06
PTPRD-212ENST00000488774 BCL2L13Q9BXK5 485 aa8.43□□□□□ -1.06
PTPRD-212ENST00000488774 DBF4Q9UBU7 674 aaPredicted RBP8.43□□□□□ -1.06
PTPRD-212ENST00000488774 DUOX1Q9NRD9 1551 aa8.43□□□□□ -1.06
PTPRD-212ENST00000488774 SCN9AQ15858 1988 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 KLRG2A4D1S0 409 aaPredicted RBP8.42□□□□□ -1.06
PTPRD-212ENST00000488774 PI4KAP2A4QPH2 592 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 SLC4A2P04920 1241 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 TGFB2P61812 414 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 RASSF7Q02833 373 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 CALD1Q05682 793 aaKnown RBP8.42□□□□□ -1.06
PTPRD-212ENST00000488774 GOLGA2Q08379 1002 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 CWF19L2Q2TBE0 894 aaKnown RBP8.42□□□□□ -1.06
PTPRD-212ENST00000488774 KIF6Q6ZMV9 814 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 ANKRD13DQ6ZTN6 518 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 NBPF5PQ86XG9 351 aaPredicted RBP8.42□□□□□ -1.06
PTPRD-212ENST00000488774 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
PTPRD-212ENST00000488774 PI4KAP1Q8N8J0 262 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 CNBD1Q8NA66 436 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 PLBD2Q8NHP8 589 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 SSH1Q8WYL5 1049 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 MYD88Q99836 296 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 ZNF219Q9P2Y4 722 aaPredicted RBP8.42□□□□□ -1.06
PTPRD-212ENST00000488774 MAP3K2Q9Y2U5 619 aa8.42□□□□□ -1.06
PTPRD-212ENST00000488774 SRGNP10124 158 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 HNRNPUQ00839 825 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRD-212ENST00000488774 FLIIQ13045 1269 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 GPR162Q16538 588 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 CCDC30Q5VVM6 783 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 C7orf43Q8WVR3 580 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 FAM89AQ96GI7 184 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 HYPKQ9NX55 129 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 BCS1LQ9Y276 419 aa8.41□□□□□ -1.06
PTPRD-212ENST00000488774 RIC1Q4ADV7 1423 aa8.4□□□□□ -1.06
PTPRD-212ENST00000488774 IBTKQ9P2D0 1353 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-212ENST00000488774 WTIPA6NIX2 430 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-212ENST00000488774 NFKBIEO00221 500 aa8.4□□□□□ -1.06
PTPRD-212ENST00000488774 CASP7P55210 303 aa8.4□□□□□ -1.06
PTPRD-212ENST00000488774 CRY2Q49AN0 593 aa8.4□□□□□ -1.06
PTPRD-212ENST00000488774 METTL22Q9BUU2 404 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-212ENST00000488774 BRIP1Q9BX63 1249 aa8.4□□□□□ -1.06
PTPRD-212ENST00000488774 E9PSI1 815 aa8.39□□□□□ -1.07
PTPRD-212ENST00000488774 RGL2O15211 777 aa8.39□□□□□ -1.07
PTPRD-212ENST00000488774 HMGB2P26583 209 aaKnown RBP8.39□□□□□ -1.07
PTPRD-212ENST00000488774 KSR2Q6VAB6 950 aa8.39□□□□□ -1.07
PTPRD-212ENST00000488774 ZNF622Q969S3 477 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPRD-212ENST00000488774 RNF216Q9NWF9 866 aaPredicted RBP8.39□□□□□ -1.07
PTPRD-212ENST00000488774 ZNF652Q9Y2D9 606 aa8.39□□□□□ -1.07
PTPRD-212ENST00000488774 PSME4Q14997 1843 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 NEURL1BA8MQ27 555 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 C21orf2O43822 256 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 BCAR3O75815 825 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 EPHA10Q5JZY3 1008 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 SLC10A5Q5PT55 438 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
PTPRD-212ENST00000488774 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 UTP14AQ9BVJ6 771 aaKnown RBP8.38□□□□□ -1.07
PTPRD-212ENST00000488774 MYH16Q9H6N6 1097 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 SEC31BQ9NQW1 1179 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 PIM2Q9P1W9 311 aa8.38□□□□□ -1.07
PTPRD-212ENST00000488774 ABCC4O15439 1325 aa8.37□□□□□ -1.07
PTPRD-212ENST00000488774 H0YIN7 160 aa8.37□□□□□ -1.07
PTPRD-212ENST00000488774 RARSP54136 660 aaKnown RBP8.37□□□□□ -1.07
PTPRD-212ENST00000488774 ST5P78524 1137 aa8.37□□□□□ -1.07
PTPRD-212ENST00000488774 TRIM28Q13263 835 aaKnown RBP8.37□□□□□ -1.07
PTPRD-212ENST00000488774 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
PTPRD-212ENST00000488774 BEND3Q5T5X7 828 aa8.37□□□□□ -1.07
PTPRD-212ENST00000488774 TPTE2Q6XPS3 522 aa8.37□□□□□ -1.07
PTPRD-212ENST00000488774 KAZALD1Q96I82 304 aa8.37□□□□□ -1.07
PTPRD-212ENST00000488774 CCDC85AQ96PX6 553 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-212ENST00000488774 TRMT112Q9UI30 125 aaKnown RBP8.37□□□□□ -1.07
PTPRD-212ENST00000488774 POLR2AP24928 1970 aaKnown RBP8.37□□□□□ -1.07
PTPRD-212ENST00000488774 ZBED9Q6R2W3 1325 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 NPM3O75607 178 aaKnown RBP8.36□□□□□ -1.07
PTPRD-212ENST00000488774 PDE6BP35913 854 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 FKBP5Q13451 457 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-212ENST00000488774 PARP10Q53GL7 1025 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 STYK1Q6J9G0 422 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 ARHGAP27Q6ZUM4 889 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
PTPRD-212ENST00000488774 TTLL6Q8N841 843 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 DNAAF4Q8WXU2 420 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 CELF1Q92879 486 aaKnown RBP8.36□□□□□ -1.07
PTPRD-212ENST00000488774 MASTLQ96GX5 879 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 PCNTO95613 3336 aa8.36□□□□□ -1.07
PTPRD-212ENST00000488774 H7C1W4 665 aa8.35□□□□□ -1.07
PTPRD-212ENST00000488774 IRS4O14654 1257 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-212ENST00000488774 NPR1P16066 1061 aa8.35□□□□□ -1.07
PTPRD-212ENST00000488774 YY1P25490 414 aa8.35□□□□□ -1.07
PTPRD-212ENST00000488774 HOXA10P31260 410 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-212ENST00000488774 GCKRQ14397 625 aa8.35□□□□□ -1.07
PTPRD-212ENST00000488774 PPP1R42Q7Z4L9 355 aa8.35□□□□□ -1.07
PTPRD-212ENST00000488774 GPR101Q96P66 508 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-212ENST00000488774 STK31Q9BXU1 1019 aa8.35□□□□□ -1.07
PTPRD-212ENST00000488774 RNF39Q9H2S5 420 aa8.35□□□□□ -1.07
PTPRD-212ENST00000488774 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
PTPRD-212ENST00000488774 SH3TC1Q8TE82 1336 aa8.34□□□□□ -1.07
PTPRD-212ENST00000488774 PCCAP05165 728 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms