RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TAOK3Q9H2K8 898 aa22.98■■□□□ 1.27
ITGB1-215ENST00000488494 HYPKQ9NX55 129 aa22.98■■□□□ 1.27
ITGB1-215ENST00000488494 LTBP3Q9NS15 1303 aa22.98■■□□□ 1.27
ITGB1-215ENST00000488494 CCDC93Q567U6 631 aa22.97■■□□□ 1.27
ITGB1-215ENST00000488494 NLRP10Q86W26 655 aa22.97■■□□□ 1.27
ITGB1-215ENST00000488494 PLBD2Q8NHP8 589 aa22.97■■□□□ 1.27
ITGB1-215ENST00000488494 RPGRQ92834 1020 aaKnown RBP22.97■■□□□ 1.27
ITGB1-215ENST00000488494 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
ITGB1-215ENST00000488494 TCIRG1Q13488 830 aa22.96■■□□□ 1.27
ITGB1-215ENST00000488494 C3orf67Q6ZVT6 689 aa22.96■■□□□ 1.27
ITGB1-215ENST00000488494 C7orf43Q8WVR3 580 aa22.96■■□□□ 1.27
ITGB1-215ENST00000488494 RNF123Q5XPI4 1314 aa22.96■■□□□ 1.27
ITGB1-215ENST00000488494 KDM2BQ8NHM5 1336 aa22.96■■□□□ 1.27
ITGB1-215ENST00000488494 OLFM4Q6UX06 510 aa22.95■■□□□ 1.26
ITGB1-215ENST00000488494 LAMB2P55268 1798 aa22.94■■□□□ 1.26
ITGB1-215ENST00000488494 IL16Q14005 1332 aa22.94■■□□□ 1.26
ITGB1-215ENST00000488494 ALDH1B1P30837 517 aa22.94■■□□□ 1.26
ITGB1-215ENST00000488494 ANKRD13DQ6ZTN6 518 aa22.94■■□□□ 1.26
ITGB1-215ENST00000488494 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
ITGB1-215ENST00000488494 TSPYL6Q8N831 410 aa22.94■■□□□ 1.26
ITGB1-215ENST00000488494 ZNF428Q96B54 188 aa22.94■■□□□ 1.26
ITGB1-215ENST00000488494 SALL2Q9Y467 1007 aaPredicted RBP22.94■■□□□ 1.26
ITGB1-215ENST00000488494 DICER1Q9UPY3 1922 aaKnown RBP22.93■■□□□ 1.26
ITGB1-215ENST00000488494 GOLGA2Q08379 1002 aa22.92■■□□□ 1.26
ITGB1-215ENST00000488494 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
ITGB1-215ENST00000488494 PHAXQ9H814 394 aaKnown RBP22.92■■□□□ 1.26
ITGB1-215ENST00000488494 TRMT112Q9UI30 125 aaKnown RBP22.92■■□□□ 1.26
ITGB1-215ENST00000488494 SH3TC1Q8TE82 1336 aa22.91■■□□□ 1.26
ITGB1-215ENST00000488494 HOXA10P31260 410 aaPredicted RBP22.91■■□□□ 1.26
ITGB1-215ENST00000488494 CCDC30Q5VVM6 783 aa22.91■■□□□ 1.26
ITGB1-215ENST00000488494 RBM17Q96I25 401 aaKnown RBP22.91■■□□□ 1.26
ITGB1-215ENST00000488494 DDX60Q8IY21 1712 aaKnown RBP22.91■■□□□ 1.26
ITGB1-215ENST00000488494 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
ITGB1-215ENST00000488494 FANCIQ9NVI1 1328 aa22.9■■□□□ 1.26
ITGB1-215ENST00000488494 ATP5J2-PTCD1G3V325 749 aa22.9■■□□□ 1.26
ITGB1-215ENST00000488494 HCLS1P14317 486 aaPredicted RBP22.9■■□□□ 1.26
ITGB1-215ENST00000488494 SYNE4Q8N205 404 aa22.9■■□□□ 1.26
ITGB1-215ENST00000488494 NLRP3Q96P20 1036 aa22.9■■□□□ 1.26
ITGB1-215ENST00000488494 FKBP4Q02790 459 aaKnown RBP eCLIP22.89■■□□□ 1.25
ITGB1-215ENST00000488494 SLC10A5Q5PT55 438 aa22.89■■□□□ 1.25
ITGB1-215ENST00000488494 RIC3Q7Z5B4 369 aa22.89■■□□□ 1.25
ITGB1-215ENST00000488494 SLC51AQ86UW1 340 aa22.89■■□□□ 1.25
ITGB1-215ENST00000488494 RTKN2Q8IZC4 609 aa22.89■■□□□ 1.25
ITGB1-215ENST00000488494 ISCA1Q9BUE6 129 aa22.89■■□□□ 1.25
ITGB1-215ENST00000488494 CEP350Q5VT06 3117 aa22.89■■□□□ 1.25
ITGB1-215ENST00000488494 GLTPD2A6NH11 291 aa22.88■■□□□ 1.25
ITGB1-215ENST00000488494 PPEF1O14829 653 aaPredicted RBP22.88■■□□□ 1.25
ITGB1-215ENST00000488494 TWISTNBQ3B726 338 aaPredicted RBP22.88■■□□□ 1.25
ITGB1-215ENST00000488494 CRAMP1Q96RY5 1269 aa22.88■■□□□ 1.25
ITGB1-215ENST00000488494 CHMP4AQ9BY43 222 aa22.88■■□□□ 1.25
ITGB1-215ENST00000488494 ZNF277Q9NRM2 450 aaPredicted RBP22.88■■□□□ 1.25
ITGB1-215ENST00000488494 RRAGCQ9HB90 399 aa22.87■■□□□ 1.25
ITGB1-215ENST00000488494 ABCC4O15439 1325 aa22.86■■□□□ 1.25
ITGB1-215ENST00000488494 TCERG1O14776 1098 aaKnown RBP22.86■■□□□ 1.25
ITGB1-215ENST00000488494 TOMM70O94826 608 aa22.86■■□□□ 1.25
ITGB1-215ENST00000488494 WDR63Q8IWG1 891 aa22.86■■□□□ 1.25
ITGB1-215ENST00000488494 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
ITGB1-215ENST00000488494 STK31Q9BXU1 1019 aa22.86■■□□□ 1.25
ITGB1-215ENST00000488494 WDR90Q96KV7 1748 aa22.85■■□□□ 1.25
ITGB1-215ENST00000488494 FAM89AQ96GI7 184 aa22.84■■□□□ 1.25
ITGB1-215ENST00000488494 MYD88Q99836 296 aa22.84■■□□□ 1.25
ITGB1-215ENST00000488494 DDX58O95786 925 aaKnown RBP22.83■■□□□ 1.25
ITGB1-215ENST00000488494 RTL5Q5HYW3 569 aaPredicted RBP22.83■■□□□ 1.25
ITGB1-215ENST00000488494 CC2D2BQ6DHV5 1058 aa22.83■■□□□ 1.25
ITGB1-215ENST00000488494 TRIM28Q13263 835 aaKnown RBP22.82■■□□□ 1.24
ITGB1-215ENST00000488494 DPY19L2Q6NUT2 758 aa22.82■■□□□ 1.24
ITGB1-215ENST00000488494 PSMD1Q99460 953 aa22.82■■□□□ 1.24
ITGB1-215ENST00000488494 COL4A5P29400 1685 aa22.81■■□□□ 1.24
ITGB1-215ENST00000488494 HSPA6P17066 643 aa22.81■■□□□ 1.24
ITGB1-215ENST00000488494 IARSP41252 1262 aaKnown RBP22.81■■□□□ 1.24
ITGB1-215ENST00000488494 RBM46Q8TBY0 533 aaKnown RBP22.81■■□□□ 1.24
ITGB1-215ENST00000488494 DDX46Q7L014 1031 aaKnown RBP22.8■■□□□ 1.24
ITGB1-215ENST00000488494 SPINK5Q9NQ38 1064 aaPredicted RBP22.8■■□□□ 1.24
ITGB1-215ENST00000488494 MAP3K2Q9Y2U5 619 aa22.8■■□□□ 1.24
ITGB1-215ENST00000488494 ATP6V0A2Q9Y487 856 aa22.8■■□□□ 1.24
ITGB1-215ENST00000488494 ZNF541Q9H0D2 1346 aa22.8■■□□□ 1.24
ITGB1-215ENST00000488494 LRRC37AA6NMS7 1700 aa22.79■■□□□ 1.24
ITGB1-215ENST00000488494 COL4A1P02462 1669 aa22.79■■□□□ 1.24
ITGB1-215ENST00000488494 VEGFAP15692 232 aaPredicted RBP22.79■■□□□ 1.24
ITGB1-215ENST00000488494 EXOSC9Q06265 439 aaKnown RBP22.79■■□□□ 1.24
ITGB1-215ENST00000488494 GRAPQ13588 217 aa22.79■■□□□ 1.24
ITGB1-215ENST00000488494 GRAPLQ8TC17 118 aaPredicted RBP22.79■■□□□ 1.24
ITGB1-215ENST00000488494 METTL22Q9BUU2 404 aaPredicted RBP22.79■■□□□ 1.24
ITGB1-215ENST00000488494 PI4KAP2A4QPH2 592 aa22.78■■□□□ 1.24
ITGB1-215ENST00000488494 IRS4O14654 1257 aaPredicted RBP22.78■■□□□ 1.24
ITGB1-215ENST00000488494 DDNO94850 711 aaPredicted RBP22.78■■□□□ 1.24
ITGB1-215ENST00000488494 TAF1P21675 1872 aa22.78■■□□□ 1.24
ITGB1-215ENST00000488494 GRIPAP1Q4V328 841 aa22.78■■□□□ 1.24
ITGB1-215ENST00000488494 G2E3Q7L622 706 aa22.78■■□□□ 1.24
ITGB1-215ENST00000488494 PI4KAP1Q8N8J0 262 aa22.78■■□□□ 1.24
ITGB1-215ENST00000488494 ZBTB38Q8NAP3 1195 aaPredicted RBP22.78■■□□□ 1.24
ITGB1-215ENST00000488494 TMX4Q9H1E5 349 aaPredicted RBP22.78■■□□□ 1.24
ITGB1-215ENST00000488494 MYH16Q9H6N6 1097 aa22.78■■□□□ 1.24
ITGB1-215ENST00000488494 CWC25Q9NXE8 425 aaPredicted RBP22.78■■□□□ 1.24
ITGB1-215ENST00000488494 SLC4A2P04920 1241 aa22.77■■□□□ 1.24
ITGB1-215ENST00000488494 KSR2Q6VAB6 950 aa22.77■■□□□ 1.24
ITGB1-215ENST00000488494 CCDC191Q8NCU4 936 aa22.77■■□□□ 1.24
ITGB1-215ENST00000488494 POTECB2RU33 542 aa22.76■■□□□ 1.23
ITGB1-215ENST00000488494 BBOX1O75936 387 aa22.76■■□□□ 1.23
ITGB1-215ENST00000488494 ZNF521Q96K83 1311 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms