RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 CAPNS2Q96L46 248 aa14.51□□□□□ -0.09
LCN2-206ENST00000488391 BEGAINQ9BUH8 593 aa14.51□□□□□ -0.09
LCN2-206ENST00000488391 LMOD1P29536 600 aaPredicted RBP14.5□□□□□ -0.09
LCN2-206ENST00000488391 NGEFQ8N5V2 710 aa14.5□□□□□ -0.09
LCN2-206ENST00000488391 GPR101Q96P66 508 aaPredicted RBP14.5□□□□□ -0.09
LCN2-206ENST00000488391 PSMD1Q99460 953 aa14.5□□□□□ -0.09
LCN2-206ENST00000488391 COL3A1P02461 1466 aaPredicted RBP14.5□□□□□ -0.09
LCN2-206ENST00000488391 TRAF5O00463 557 aa14.49□□□□□ -0.09
LCN2-206ENST00000488391 TCERG1O14776 1098 aaKnown RBP14.49□□□□□ -0.09
LCN2-206ENST00000488391 ECE1P42892 770 aa14.49□□□□□ -0.09
LCN2-206ENST00000488391 MLLT1Q03111 559 aaPredicted RBP14.49□□□□□ -0.09
LCN2-206ENST00000488391 DCTN1Q14203 1278 aa14.49□□□□□ -0.09
LCN2-206ENST00000488391 CST9Q5W186 159 aa14.49□□□□□ -0.09
LCN2-206ENST00000488391 NUTM1Q86Y26 1132 aa14.49□□□□□ -0.09
LCN2-206ENST00000488391 RTF1Q92541 710 aaKnown RBP14.49□□□□□ -0.09
LCN2-206ENST00000488391 TSKSQ9UJT2 592 aa14.49□□□□□ -0.09
LCN2-206ENST00000488391 SCNN1DP51172 638 aa14.48□□□□□ -0.09
LCN2-206ENST00000488391 LARGE2Q8N3Y3 721 aa14.48□□□□□ -0.09
LCN2-206ENST00000488391 RSPH6AQ9H0K4 717 aa14.48□□□□□ -0.09
LCN2-206ENST00000488391 AOC2O75106 756 aa14.47□□□□□ -0.09
LCN2-206ENST00000488391 CRY2Q49AN0 593 aa14.47□□□□□ -0.09
LCN2-206ENST00000488391 CC2D2BQ6DHV5 1058 aa14.47□□□□□ -0.09
LCN2-206ENST00000488391 SLC51AQ86UW1 340 aa14.47□□□□□ -0.09
LCN2-206ENST00000488391 RPGRQ92834 1020 aaKnown RBP14.47□□□□□ -0.09
LCN2-206ENST00000488391 MIS18AQ9NYP9 233 aa14.47□□□□□ -0.09
LCN2-206ENST00000488391 MYBBP1AQ9BQG0 1328 aaKnown RBP14.46□□□□□ -0.09
LCN2-206ENST00000488391 COL4A5P29400 1685 aa14.46□□□□□ -0.09
LCN2-206ENST00000488391 RGL2O15211 777 aa14.46□□□□□ -0.09
LCN2-206ENST00000488391 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
LCN2-206ENST00000488391 NYXQ9GZU5 481 aa14.46□□□□□ -0.09
LCN2-206ENST00000488391 LTBP1Q14766 1721 aa14.46□□□□□ -0.1
LCN2-206ENST00000488391 ABCC12Q96J65 1359 aa14.46□□□□□ -0.1
LCN2-206ENST00000488391 RGS19P49795 217 aa14.45□□□□□ -0.1
LCN2-206ENST00000488391 USP50Q70EL3 339 aaPredicted RBP14.45□□□□□ -0.1
LCN2-206ENST00000488391 SNED1Q8TER0 1413 aa14.45□□□□□ -0.1
LCN2-206ENST00000488391 TLL2Q9Y6L7 1015 aa14.45□□□□□ -0.1
LCN2-206ENST00000488391 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
LCN2-206ENST00000488391 GPTP24298 496 aa14.44□□□□□ -0.1
LCN2-206ENST00000488391 HOXA10P31260 410 aaPredicted RBP14.44□□□□□ -0.1
LCN2-206ENST00000488391 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
LCN2-206ENST00000488391 TAF7Q15545 349 aaPredicted RBP14.44□□□□□ -0.1
LCN2-206ENST00000488391 NIM1KQ8IY84 436 aa14.44□□□□□ -0.1
LCN2-206ENST00000488391 CFAP53Q96M91 514 aa14.44□□□□□ -0.1
LCN2-206ENST00000488391 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
LCN2-206ENST00000488391 TRPM7Q96QT4 1865 aa14.44□□□□□ -0.1
LCN2-206ENST00000488391 CASP8AP2Q9UKL3 1982 aa14.43□□□□□ -0.1
LCN2-206ENST00000488391 MAP2K2P36507 400 aa14.43□□□□□ -0.1
LCN2-206ENST00000488391 TTLL7Q6ZT98 887 aa14.43□□□□□ -0.1
LCN2-206ENST00000488391 RBM17Q96I25 401 aaKnown RBP14.43□□□□□ -0.1
LCN2-206ENST00000488391 NUDCQ9Y266 331 aa14.43□□□□□ -0.1
LCN2-206ENST00000488391 ERVV-1B6SEH8 477 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 PPEF1O14829 653 aaPredicted RBP14.42□□□□□ -0.1
LCN2-206ENST00000488391 PPIP5K2O43314 1243 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 CELF2O95319 508 aaKnown RBP14.42□□□□□ -0.1
LCN2-206ENST00000488391 MYL6BP14649 208 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 AOC3Q16853 763 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 GRIPAP1Q4V328 841 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 SUSD4Q5VX71 490 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 MCOLN1Q9GZU1 580 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 ZBTB3Q9H5J0 574 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 GPRC5DQ9NZD1 345 aa14.42□□□□□ -0.1
LCN2-206ENST00000488391 MAP3K15Q6ZN16 1313 aa14.41□□□□□ -0.1
LCN2-206ENST00000488391 NUP98P52948 1817 aa14.41□□□□□ -0.1
LCN2-206ENST00000488391 CXCL9Q07325 125 aa14.41□□□□□ -0.1
LCN2-206ENST00000488391 C3orf67Q6ZVT6 689 aa14.41□□□□□ -0.1
LCN2-206ENST00000488391 SAPCD2Q86UD0 394 aa14.41□□□□□ -0.1
LCN2-206ENST00000488391 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
LCN2-206ENST00000488391 ADARB2Q9NS39 739 aaKnown RBP14.41□□□□□ -0.1
LCN2-206ENST00000488391 UBN2Q6ZU65 1347 aa14.41□□□□□ -0.1
LCN2-206ENST00000488391 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
LCN2-206ENST00000488391 KIF6Q6ZMV9 814 aa14.4□□□□□ -0.1
LCN2-206ENST00000488391 ZNF408Q9H9D4 720 aa14.4□□□□□ -0.1
LCN2-206ENST00000488391 GMPSP49915 693 aaPredicted RBP14.39□□□□□ -0.11
LCN2-206ENST00000488391 TMX4Q9H1E5 349 aaPredicted RBP14.39□□□□□ -0.11
LCN2-206ENST00000488391 MRS2Q9HD23 443 aa14.39□□□□□ -0.11
LCN2-206ENST00000488391 ZNRF3Q9ULT6 936 aa14.39□□□□□ -0.11
LCN2-206ENST00000488391 THSD7BQ9C0I4 1608 aa14.38□□□□□ -0.11
LCN2-206ENST00000488391 CA12O43570 354 aa14.38□□□□□ -0.11
LCN2-206ENST00000488391 DGKZQ13574 1117 aa14.38□□□□□ -0.11
LCN2-206ENST00000488391 CIAPIN1Q6FI81 312 aa14.38□□□□□ -0.11
LCN2-206ENST00000488391 ZNF34Q8IZ26 560 aa14.38□□□□□ -0.11
LCN2-206ENST00000488391 NLRP3Q96P20 1036 aa14.38□□□□□ -0.11
LCN2-206ENST00000488391 NTSR2O95665 410 aa14.37□□□□□ -0.11
LCN2-206ENST00000488391 HIRAP54198 1017 aaPredicted RBP14.37□□□□□ -0.11
LCN2-206ENST00000488391 ZIC5Q96T25 663 aa14.37□□□□□ -0.11
LCN2-206ENST00000488391 BCL2L13Q9BXK5 485 aa14.37□□□□□ -0.11
LCN2-206ENST00000488391 ATP6V0A2Q9Y487 856 aa14.37□□□□□ -0.11
LCN2-206ENST00000488391 RAD17O75943 681 aa14.36□□□□□ -0.11
LCN2-206ENST00000488391 PPP2R1AP30153 589 aa14.36□□□□□ -0.11
LCN2-206ENST00000488391 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
LCN2-206ENST00000488391 EIF4A1P60842 406 aaKnown RBP14.36□□□□□ -0.11
LCN2-206ENST00000488391 GIGYF2Q6Y7W6 1299 aaKnown RBP14.36□□□□□ -0.11
LCN2-206ENST00000488391 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
LCN2-206ENST00000488391 SUPT20HQ8NEM7 779 aa14.36□□□□□ -0.11
LCN2-206ENST00000488391 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
LCN2-206ENST00000488391 HHIPL1Q96JK4 782 aa14.36□□□□□ -0.11
LCN2-206ENST00000488391 VPS33BQ9H267 617 aa14.36□□□□□ -0.11
LCN2-206ENST00000488391 PGAP2Q9UHJ9 254 aa14.36□□□□□ -0.11
LCN2-206ENST00000488391 RIC1Q4ADV7 1423 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms