RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ROCK2O75116 1388 aaKnown RBP8.45□□□□□ -1.06
CDHR3-213ENST00000488386 EIF3AQ14152 1382 aaKnown RBP8.45□□□□□ -1.06
CDHR3-213ENST00000488386 BRWD3Q6RI45 1802 aa8.45□□□□□ -1.06
CDHR3-213ENST00000488386 RALGAPBQ86X10 1494 aa8.45□□□□□ -1.06
CDHR3-213ENST00000488386 PHRF1Q9P1Y6 1649 aaKnown RBP8.44□□□□□ -1.06
CDHR3-213ENST00000488386 NRAPQ86VF7 1730 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 GFRA3O60609 400 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 VAC14Q08AM6 782 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 TRIM26Q12899 539 aaPredicted RBP8.44□□□□□ -1.06
CDHR3-213ENST00000488386 NR1H3Q13133 447 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 CHRNA2Q15822 529 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 ZBTB33Q86T24 672 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 TRMT44Q8IYL2 757 aaKnown RBP8.44□□□□□ -1.06
CDHR3-213ENST00000488386 FAM174AQ8TBP5 190 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 PPIP5K1Q6PFW1 1433 aa8.44□□□□□ -1.06
CDHR3-213ENST00000488386 SMPD1P17405 629 aa8.43□□□□□ -1.06
CDHR3-213ENST00000488386 CYP4X1Q8N118 509 aa8.43□□□□□ -1.06
CDHR3-213ENST00000488386 SNIP1Q8TAD8 396 aaKnown RBP8.43□□□□□ -1.06
CDHR3-213ENST00000488386 IRX2Q9BZI1 471 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-213ENST00000488386 PRM3Q9NNZ6 103 aa8.43□□□□□ -1.06
CDHR3-213ENST00000488386 BTG4Q9NY30 223 aa8.43□□□□□ -1.06
CDHR3-213ENST00000488386 TTC24A2A3L6 582 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-213ENST00000488386 NRG2O14511 850 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-213ENST00000488386 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
CDHR3-213ENST00000488386 ZC3H6P61129 1189 aaKnown RBP8.42□□□□□ -1.06
CDHR3-213ENST00000488386 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
CDHR3-213ENST00000488386 POLR3AO14802 1390 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-213ENST00000488386 TONSLQ96HA7 1378 aa8.42□□□□□ -1.06
CDHR3-213ENST00000488386 NWD2Q9ULI1 1742 aa8.42□□□□□ -1.06
CDHR3-213ENST00000488386 COL14A1Q05707 1796 aaKnown RBP8.41□□□□□ -1.06
CDHR3-213ENST00000488386 KIAA0232Q92628 1395 aa8.41□□□□□ -1.06
CDHR3-213ENST00000488386 ZBTB7CA1YPR0 619 aa8.41□□□□□ -1.06
CDHR3-213ENST00000488386 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
CDHR3-213ENST00000488386 RAD21O60216 631 aa8.41□□□□□ -1.06
CDHR3-213ENST00000488386 MYT1Q01538 1121 aa8.41□□□□□ -1.06
CDHR3-213ENST00000488386 ARID5BQ14865 1188 aa8.41□□□□□ -1.06
CDHR3-213ENST00000488386 CDK15Q96Q40 435 aa8.41□□□□□ -1.06
CDHR3-213ENST00000488386 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 FAM187AA6NFU0 413 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 VPS72Q15906 364 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 FAM182BQ5T319 152 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 SEPT12Q8IYM1 358 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 ABTB2Q8N961 1025 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 SLC10A4Q96EP9 437 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 PRDM11Q9NQV5 511 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 PCDHB9Q9Y5E1 797 aa8.4□□□□□ -1.06
CDHR3-213ENST00000488386 ADH1CP00326 375 aa8.39□□□□□ -1.07
CDHR3-213ENST00000488386 NR3C2P08235 984 aa8.39□□□□□ -1.07
CDHR3-213ENST00000488386 FSHRP23945 695 aa8.39□□□□□ -1.07
CDHR3-213ENST00000488386 GRM5P41594 1212 aa8.39□□□□□ -1.07
CDHR3-213ENST00000488386 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
CDHR3-213ENST00000488386 MPNDQ8N594 471 aa8.39□□□□□ -1.07
CDHR3-213ENST00000488386 CARD11Q9BXL7 1154 aa8.39□□□□□ -1.07
CDHR3-213ENST00000488386 MAP4K5Q9Y4K4 846 aa8.39□□□□□ -1.07
CDHR3-213ENST00000488386 AKAP12Q02952 1782 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 EVC2Q86UK5 1308 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 PIK3C2AO00443 1686 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 A6NJR5 290 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 LCE2BO14633 110 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
CDHR3-213ENST00000488386 HPS1Q92902 700 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 PCGF6Q9BYE7 350 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 USP35Q9P2H5 1018 aa8.38□□□□□ -1.07
CDHR3-213ENST00000488386 USP6P35125 1406 aa8.37□□□□□ -1.07
CDHR3-213ENST00000488386 NNTQ13423 1086 aa8.37□□□□□ -1.07
CDHR3-213ENST00000488386 ADAMTS19Q8TE59 1207 aa8.37□□□□□ -1.07
CDHR3-213ENST00000488386 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-213ENST00000488386 EP400Q96L91 3159 aa8.37□□□□□ -1.07
CDHR3-213ENST00000488386 CAMTA1Q9Y6Y1 1673 aa8.37□□□□□ -1.07
CDHR3-213ENST00000488386 WASHC4Q2M389 1173 aa8.36□□□□□ -1.07
CDHR3-213ENST00000488386 INTS6LQ5JSJ4 861 aaKnown RBP8.36□□□□□ -1.07
CDHR3-213ENST00000488386 DEFB132Q7Z7B7 95 aa8.36□□□□□ -1.07
CDHR3-213ENST00000488386 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
CDHR3-213ENST00000488386 USP19O94966 1318 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 SPATA31A5Q5VU36 1347 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 SPATA31A7Q8IWB4 1347 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 LMO7Q8WWI1 1683 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 GCP02774 474 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 LAPTM4AQ15012 233 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 LARP1Q6PKG0 1096 aaKnown RBP8.35□□□□□ -1.07
CDHR3-213ENST00000488386 KRT27Q7Z3Y8 459 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.35□□□□□ -1.072e-6■■■□□ 15.6
CDHR3-213ENST00000488386 TMC1Q8TDI8 760 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 SSH2Q76I76 1423 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 RGPD5Q99666 1765 aa8.35□□□□□ -1.07
CDHR3-213ENST00000488386 MON2Q7Z3U7 1717 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 TTC21BQ7Z4L5 1316 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 THSD7AQ9UPZ6 1657 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 ESPNB1AK53 854 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 GIGYF1O75420 1035 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-213ENST00000488386 EVA1CP58658 441 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 RAB15P59190 212 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 NLRP13Q86W25 1043 aa8.34□□□□□ -1.07
CDHR3-213ENST00000488386 ZNF330Q9Y3S2 320 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-213ENST00000488386 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
CDHR3-213ENST00000488386 SLIT3O75094 1523 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms