RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 ADAMTSL1Q8N6G6 1762 aa15.38■□□□□ 0.05
HLA-DOB-209ENST00000488325 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 ECE1P42892 770 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 BRPF1P55201 1214 aaPredicted RBP15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 GRM1Q13255 1194 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 DGKZQ13574 1117 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 SSH1Q8WYL5 1049 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 ZNF622Q969S3 477 aaKnown RBP eCLIP15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 CHMP4AQ9BY43 222 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 LGR6Q9HBX8 967 aa15.37■□□□□ 0.05
HLA-DOB-209ENST00000488325 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
HLA-DOB-209ENST00000488325 TSPYL6Q8N831 410 aa15.36■□□□□ 0.05
HLA-DOB-209ENST00000488325 C8orf58Q8NAV2 365 aa15.36■□□□□ 0.05
HLA-DOB-209ENST00000488325 FRAT1Q92837 279 aaPredicted RBP15.36■□□□□ 0.05
HLA-DOB-209ENST00000488325 TJP1Q07157 1748 aa15.36■□□□□ 0.05
HLA-DOB-209ENST00000488325 BTBD11A6QL63 1104 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 EPHX2P34913 555 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 CABP4P57796 275 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 CYP4F22Q6NT55 531 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 BCL2L13Q9BXK5 485 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 MIS18AQ9NYP9 233 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 CASP8AP2Q9UKL3 1982 aa15.35■□□□□ 0.05
HLA-DOB-209ENST00000488325 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
HLA-DOB-209ENST00000488325 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
HLA-DOB-209ENST00000488325 NARFQ9UHQ1 456 aa15.34■□□□□ 0.05
HLA-DOB-209ENST00000488325 SOX10P56693 466 aa15.33■□□□□ 0.04
HLA-DOB-209ENST00000488325 PNMA8AQ86V59 439 aaPredicted RBP15.33■□□□□ 0.04
HLA-DOB-209ENST00000488325 EXOC6Q8TAG9 804 aa15.33■□□□□ 0.04
HLA-DOB-209ENST00000488325 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
HLA-DOB-209ENST00000488325 DDX21Q9NR30 783 aaKnown RBP eCLIP15.33■□□□□ 0.04
HLA-DOB-209ENST00000488325 SCN11AQ9UI33 1791 aa15.33■□□□□ 0.04
HLA-DOB-209ENST00000488325 CA12O43570 354 aa15.32■□□□□ 0.04
HLA-DOB-209ENST00000488325 HOXB7P09629 217 aa15.32■□□□□ 0.04
HLA-DOB-209ENST00000488325 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
HLA-DOB-209ENST00000488325 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
HLA-DOB-209ENST00000488325 SLC52A2Q9HAB3 445 aa15.32■□□□□ 0.04
HLA-DOB-209ENST00000488325 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
HLA-DOB-209ENST00000488325 MRC1P22897 1456 aa15.32■□□□□ 0.04
HLA-DOB-209ENST00000488325 KDM3BQ7LBC6 1761 aa15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 ANKRD31Q8N7Z5 1873 aa15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 AOC2O75106 756 aa15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 ARHGAP45Q92619 1136 aa15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 NOB1Q9ULX3 412 aaKnown RBP15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 PDZRN3Q9UPQ7 1066 aa15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 COL11A2P13942 1736 aaPredicted RBP15.31■□□□□ 0.04
HLA-DOB-209ENST00000488325 MAP2K2P36507 400 aa15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 COL15A1P39059 1388 aa15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 EIF4A1P60842 406 aaKnown RBP15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 FMR1Q06787 632 aaKnown RBP eCLIP15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 AAMPQ13685 434 aa15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 CCDC30Q5VVM6 783 aa15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 STK31Q9BXU1 1019 aa15.3■□□□□ 0.04
HLA-DOB-209ENST00000488325 SIPA1L3O60292 1781 aaPredicted RBP15.29■□□□□ 0.04
HLA-DOB-209ENST00000488325 PDE6BP35913 854 aa15.29■□□□□ 0.04
HLA-DOB-209ENST00000488325 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
HLA-DOB-209ENST00000488325 DNAJC10Q8IXB1 793 aa15.29■□□□□ 0.04
HLA-DOB-209ENST00000488325 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
HLA-DOB-209ENST00000488325 BRIP1Q9BX63 1249 aa15.29■□□□□ 0.04
HLA-DOB-209ENST00000488325 API5Q9BZZ5 524 aaKnown RBP15.29■□□□□ 0.04
HLA-DOB-209ENST00000488325 SOGA3Q5TF21 947 aa15.28■□□□□ 0.04
HLA-DOB-209ENST00000488325 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
HLA-DOB-209ENST00000488325 SLX4Q8IY92 1834 aa15.28■□□□□ 0.04
HLA-DOB-209ENST00000488325 TRIM27P14373 513 aa15.27■□□□□ 0.04
HLA-DOB-209ENST00000488325 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.04
HLA-DOB-209ENST00000488325 TTC5Q8N0Z6 440 aa15.27■□□□□ 0.04
HLA-DOB-209ENST00000488325 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.04
HLA-DOB-209ENST00000488325 PANK1Q8TE04 598 aa15.27■□□□□ 0.04
HLA-DOB-209ENST00000488325 CNKSR1Q969H4 720 aa15.27■□□□□ 0.04
HLA-DOB-209ENST00000488325 TLL2Q9Y6L7 1015 aa15.27■□□□□ 0.04
HLA-DOB-209ENST00000488325 PTPRCP08575 1304 aa15.26■□□□□ 0.03
HLA-DOB-209ENST00000488325 CST9Q5W186 159 aa15.26■□□□□ 0.03
HLA-DOB-209ENST00000488325 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
HLA-DOB-209ENST00000488325 ZBTB1Q9Y2K1 713 aa15.26■□□□□ 0.03
HLA-DOB-209ENST00000488325 COG6Q9Y2V7 657 aa15.26■□□□□ 0.03
HLA-DOB-209ENST00000488325 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 CYP19A1P11511 503 aaPredicted RBP15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 MVPQ14764 893 aaKnown RBP15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 PRR5LQ6MZQ0 368 aa15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 CLUAP1Q96AJ1 413 aa15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 CACNA1SQ13698 1873 aa15.25■□□□□ 0.03
HLA-DOB-209ENST00000488325 KCNQ3O43525 872 aa15.24■□□□□ 0.03
HLA-DOB-209ENST00000488325 STYK1Q6J9G0 422 aa15.24■□□□□ 0.03
HLA-DOB-209ENST00000488325 ZNF277Q9NRM2 450 aaPredicted RBP15.24■□□□□ 0.03
HLA-DOB-209ENST00000488325 DDX19BQ9UMR2 479 aa15.24■□□□□ 0.03
HLA-DOB-209ENST00000488325 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
HLA-DOB-209ENST00000488325 TRAF5O00463 557 aa15.23■□□□□ 0.03
HLA-DOB-209ENST00000488325 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
HLA-DOB-209ENST00000488325 RLBP1P12271 317 aa15.23■□□□□ 0.03
HLA-DOB-209ENST00000488325 CCDC93Q567U6 631 aa15.23■□□□□ 0.03
HLA-DOB-209ENST00000488325 TBC1D9BQ66K14 1250 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms