RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 LSG1Q9H089 658 aaKnown RBP19.41■□□□□ 0.7
RAPGEF3-211ENST00000488250 CWC22Q9HCG8 908 aaKnown RBP19.41■□□□□ 0.7
RAPGEF3-211ENST00000488250 ASAP1Q9ULH1 1129 aa19.41■□□□□ 0.7
RAPGEF3-211ENST00000488250 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
RAPGEF3-211ENST00000488250 TNPO1Q92973 898 aaKnown RBP19.41■□□□□ 0.7
RAPGEF3-211ENST00000488250 ISCA1Q9BUE6 129 aa19.41■□□□□ 0.7
RAPGEF3-211ENST00000488250 CDCA7Q9BWT1 371 aaPredicted RBP19.41■□□□□ 0.7
RAPGEF3-211ENST00000488250 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
RAPGEF3-211ENST00000488250 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
RAPGEF3-211ENST00000488250 HIP1O00291 1037 aa19.4■□□□□ 0.7
RAPGEF3-211ENST00000488250 STARD3NLO95772 234 aa19.4■□□□□ 0.7
RAPGEF3-211ENST00000488250 NEK4P51957 841 aa19.4■□□□□ 0.7
RAPGEF3-211ENST00000488250 JARID2Q92833 1246 aaPredicted RBP19.4■□□□□ 0.7
RAPGEF3-211ENST00000488250 DIAPH3Q9NSV4 1193 aa19.4■□□□□ 0.7
RAPGEF3-211ENST00000488250 EXOC5O00471 708 aa19.39■□□□□ 0.7
RAPGEF3-211ENST00000488250 CLEC17AQ6ZS10 378 aa19.39■□□□□ 0.7
RAPGEF3-211ENST00000488250 CCDC8Q9H0W5 538 aaPredicted RBP19.39■□□□□ 0.7
RAPGEF3-211ENST00000488250 LMBR1LQ6UX01 489 aa19.39■□□□□ 0.69
RAPGEF3-211ENST00000488250 DNAJC10Q8IXB1 793 aa19.39■□□□□ 0.69
RAPGEF3-211ENST00000488250 ZBTB3Q9H5J0 574 aa19.39■□□□□ 0.69
RAPGEF3-211ENST00000488250 SNRKQ9NRH2 765 aa19.39■□□□□ 0.69
RAPGEF3-211ENST00000488250 NRAPQ86VF7 1730 aa19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 TCIRG1Q13488 830 aa19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 CWC27Q6UX04 472 aaKnown RBP19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 KIAA1211Q6ZU35 1233 aa19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 GBP4Q96PP9 640 aa19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 TLR7Q9NYK1 1049 aaKnown RBP19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 THRAP3Q9Y2W1 955 aaKnown RBP19.38■□□□□ 0.69
RAPGEF3-211ENST00000488250 TNNI3KQ59H18 835 aa19.37■□□□□ 0.69
RAPGEF3-211ENST00000488250 FPGT-TNNI3KV9GXZ4 949 aa19.37■□□□□ 0.69
RAPGEF3-211ENST00000488250 ATP5JP18859 108 aa19.37■□□□□ 0.69
RAPGEF3-211ENST00000488250 PIP4K2BP78356 416 aa19.37■□□□□ 0.69
RAPGEF3-211ENST00000488250 NUCB2P80303 420 aa19.37■□□□□ 0.69
RAPGEF3-211ENST00000488250 TFCP2Q12800 502 aa19.36■□□□□ 0.69
RAPGEF3-211ENST00000488250 PTMSP20962 102 aa19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 GPR108Q9NPR9 543 aa19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 SPATA31A1Q5TZJ5 1347 aa19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 CYP2E1P05181 493 aaPredicted RBP19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 CUL4AQ13619 759 aa19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 KIF6Q6ZMV9 814 aa19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 KCNB2Q92953 911 aa19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 TMX3Q96JJ7 454 aa19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 DBNLQ9UJU6 430 aaKnown RBP19.35■□□□□ 0.69
RAPGEF3-211ENST00000488250 SNX14Q9Y5W7 946 aa19.34■□□□□ 0.69
RAPGEF3-211ENST00000488250 RFX7Q2KHR2 1363 aa19.34■□□□□ 0.69
RAPGEF3-211ENST00000488250 CIAO1O76071 339 aa19.33■□□□□ 0.69
RAPGEF3-211ENST00000488250 CYP19A1P11511 503 aaPredicted RBP19.33■□□□□ 0.69
RAPGEF3-211ENST00000488250 INTS4Q96HW7 963 aaKnown RBP19.33■□□□□ 0.69
RAPGEF3-211ENST00000488250 MAP3K15Q6ZN16 1313 aa19.33■□□□□ 0.69
RAPGEF3-211ENST00000488250 IL15P40933 162 aaPredicted RBP19.33■□□□□ 0.68
RAPGEF3-211ENST00000488250 ATG9AQ7Z3C6 839 aa19.33■□□□□ 0.68
RAPGEF3-211ENST00000488250 SLC4A9Q96Q91 983 aa19.33■□□□□ 0.68
RAPGEF3-211ENST00000488250 PLA2G12BQ9BX93 195 aa19.33■□□□□ 0.68
RAPGEF3-211ENST00000488250 BOLA2Q9H3K6 86 aa19.33■□□□□ 0.68
RAPGEF3-211ENST00000488250 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.32■□□□□ 0.68
RAPGEF3-211ENST00000488250 PCCAP05165 728 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF3-211ENST00000488250 TRAK2O60296 914 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 SSFA2P28290 1259 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 GIGYF2Q6Y7W6 1299 aaKnown RBP19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 TICAM2Q86XR7 235 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 FBXO3Q9UK99 471 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 DOT1LQ8TEK3 1739 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 HSP90AB3PQ58FF7 597 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 CCDC171Q6TFL3 1326 aa19.31■□□□□ 0.68
RAPGEF3-211ENST00000488250 EYA2O00167 538 aa19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 NMIQ13287 307 aaPredicted RBP19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 ZGPATQ8N5A5 531 aaKnown RBP19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 CHMP3Q9Y3E7 222 aa19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 MED23Q9ULK4 1368 aa19.3■□□□□ 0.68
RAPGEF3-211ENST00000488250 PTH1RQ03431 593 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 TTC14Q96N46 770 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 HAUS7Q99871 368 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 TM6SF1Q9BZW5 370 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 JCADQ9P266 1359 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 SLIT2O94813 1529 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 NECTIN1Q15223 517 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 MAP4K1Q92918 833 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 SPATA31A5Q5VU36 1347 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 SPATA31A7Q8IWB4 1347 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 CDHR2Q9BYE9 1310 aa19.29■□□□□ 0.68
RAPGEF3-211ENST00000488250 ADAMTS2O95450 1211 aa19.28■□□□□ 0.68
RAPGEF3-211ENST00000488250 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
RAPGEF3-211ENST00000488250 DDB1Q16531 1140 aa19.28■□□□□ 0.68
RAPGEF3-211ENST00000488250 SKOR2Q2VWA4 1001 aaPredicted RBP19.28■□□□□ 0.68
RAPGEF3-211ENST00000488250 CSF1RP07333 972 aa19.27■□□□□ 0.68
RAPGEF3-211ENST00000488250 IL6STP40189 918 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF3-211ENST00000488250 BARGINQ6ZT62 677 aa19.27■□□□□ 0.68
RAPGEF3-211ENST00000488250 CICQ96RK0 1608 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF3-211ENST00000488250 ANKRD36CQ5JPF3 1778 aa19.27■□□□□ 0.68
RAPGEF3-211ENST00000488250 ERVV-1B6SEH8 477 aa19.27■□□□□ 0.67
RAPGEF3-211ENST00000488250 BAG4O95429 457 aaKnown RBP19.27■□□□□ 0.67
RAPGEF3-211ENST00000488250 ZNF330Q9Y3S2 320 aaPredicted RBP19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms