RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 HSP90AB4PQ58FF6 505 aa17.84■□□□□ 0.45
TFAP2A-215ENST00000488193 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
TFAP2A-215ENST00000488193 SASH1O94885 1247 aa17.83■□□□□ 0.44
TFAP2A-215ENST00000488193 SDSP20132 328 aa17.83■□□□□ 0.44
TFAP2A-215ENST00000488193 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
TFAP2A-215ENST00000488193 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
TFAP2A-215ENST00000488193 ERVV-1B6SEH8 477 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 MX1P20591 662 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 KCNQ4P56696 695 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 PTPN12Q05209 780 aaKnown RBP17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 TBC1D9Q6ZT07 1266 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 COPRSQ9NQ92 184 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 LMBR1LQ6UX01 489 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
TFAP2A-215ENST00000488193 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
TFAP2A-215ENST00000488193 ARXQ96QS3 562 aa17.81■□□□□ 0.44
TFAP2A-215ENST00000488193 BRWD3Q6RI45 1802 aa17.81■□□□□ 0.44
TFAP2A-215ENST00000488193 PCCAP05165 728 aaPredicted RBP17.8■□□□□ 0.44
TFAP2A-215ENST00000488193 TBC1D32Q96NH3 1257 aa17.8■□□□□ 0.44
TFAP2A-215ENST00000488193 EP400Q96L91 3159 aa17.8■□□□□ 0.44
TFAP2A-215ENST00000488193 GPTP24298 496 aa17.8■□□□□ 0.44
TFAP2A-215ENST00000488193 ZNF34Q8IZ26 560 aa17.8■□□□□ 0.44
TFAP2A-215ENST00000488193 SYNE4Q8N205 404 aa17.8■□□□□ 0.44
TFAP2A-215ENST00000488193 LY75O60449 1722 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 USP42Q9H9J4 1324 aaKnown RBP17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 CDC45O75419 566 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 FAM89AQ96GI7 184 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 SIL1Q9H173 461 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 AOX1Q06278 1338 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 UBN2Q6ZU65 1347 aa17.79■□□□□ 0.44
TFAP2A-215ENST00000488193 HSP90AB3PQ58FF7 597 aa17.78■□□□□ 0.44
TFAP2A-215ENST00000488193 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
TFAP2A-215ENST00000488193 MFAP1P55081 439 aaKnown RBP17.78■□□□□ 0.44
TFAP2A-215ENST00000488193 G3BP1Q13283 466 aaKnown RBP eCLIP17.78■□□□□ 0.44
TFAP2A-215ENST00000488193 PLA2G12BQ9BX93 195 aa17.78■□□□□ 0.44
TFAP2A-215ENST00000488193 EAF2Q96CJ1 260 aaPredicted RBP17.77■□□□□ 0.43
TFAP2A-215ENST00000488193 CNTNAP4Q9C0A0 1308 aa17.77■□□□□ 0.43
TFAP2A-215ENST00000488193 BCORQ6W2J9 1755 aa17.76■□□□□ 0.43
TFAP2A-215ENST00000488193 CDHR2Q9BYE9 1310 aa17.76■□□□□ 0.43
TFAP2A-215ENST00000488193 TAF1LQ8IZX4 1826 aa17.76■□□□□ 0.43
TFAP2A-215ENST00000488193 CSF1RP07333 972 aa17.75■□□□□ 0.43
TFAP2A-215ENST00000488193 CLASRPQ8N2M8 674 aaKnown RBP17.75■□□□□ 0.43
TFAP2A-215ENST00000488193 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
TFAP2A-215ENST00000488193 ATG9AQ7Z3C6 839 aa17.75■□□□□ 0.43
TFAP2A-215ENST00000488193 RC3H1Q5TC82 1133 aaKnown RBP17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 AACSQ86V21 672 aa17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 C22orf23Q9BZE7 217 aa17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 BCL11BQ9C0K0 894 aaPredicted RBP17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 TLR7Q9NYK1 1049 aaKnown RBP17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 TFCP2Q12800 502 aa17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 SUSD4Q5VX71 490 aa17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 AMIGO3Q86WK7 504 aa17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 ZNF594Q96JF6 807 aaPredicted RBP17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 UPF2Q9HAU5 1272 aaKnown RBP17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 TTC41PQ6P2S7 1318 aa17.73■□□□□ 0.43
TFAP2A-215ENST00000488193 MYH3P11055 1940 aa17.72■□□□□ 0.43
TFAP2A-215ENST00000488193 CCDC8Q9H0W5 538 aaPredicted RBP17.72■□□□□ 0.43
TFAP2A-215ENST00000488193 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
TFAP2A-215ENST00000488193 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
TFAP2A-215ENST00000488193 RBM25P49756 843 aaKnown RBP17.71■□□□□ 0.43
TFAP2A-215ENST00000488193 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
TFAP2A-215ENST00000488193 TTLL11Q8NHH1 800 aa17.71■□□□□ 0.43
TFAP2A-215ENST00000488193 BCL2L12Q9HB09 334 aa17.71■□□□□ 0.43
TFAP2A-215ENST00000488193 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
TFAP2A-215ENST00000488193 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 IFIT2P09913 472 aaKnown RBP17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 LRRC24Q50LG9 513 aa17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 SCN7AQ01118 1682 aa17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
TFAP2A-215ENST00000488193 EYA2O00167 538 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 MAP4K4O95819 1239 aaPredicted RBP17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 C4BP0C0L5 1744 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 CHMLP26374 656 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 CTSWP56202 376 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 DDRGK1Q96HY6 314 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 KIF2CQ99661 725 aa17.69■□□□□ 0.42
TFAP2A-215ENST00000488193 TRIM6-TRIM34B2RNG4 842 aa17.68■□□□□ 0.42
TFAP2A-215ENST00000488193 GLRX3O76003 335 aaKnown RBP17.68■□□□□ 0.42
TFAP2A-215ENST00000488193 CIAO1O76071 339 aa17.68■□□□□ 0.42
TFAP2A-215ENST00000488193 NTSR2O95665 410 aa17.68■□□□□ 0.42
TFAP2A-215ENST00000488193 ZNF772Q68DY9 489 aaPredicted RBP17.68■□□□□ 0.42
TFAP2A-215ENST00000488193 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
TFAP2A-215ENST00000488193 RILPL2Q969X0 211 aa17.68■□□□□ 0.42
TFAP2A-215ENST00000488193 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms