RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
TNFSF4-203ENST00000488053 TRPC5Q9UL62 973 aaPredicted RBP9.34□□□□□ -0.91
TNFSF4-203ENST00000488053 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
TNFSF4-203ENST00000488053 ANKRD30BQ9BXX2 1392 aa9.34□□□□□ -0.91
TNFSF4-203ENST00000488053 MYOM2P54296 1465 aa9.34□□□□□ -0.91
TNFSF4-203ENST00000488053 TECPR2O15040 1411 aa9.33□□□□□ -0.92
TNFSF4-203ENST00000488053 YTHDC2Q9H6S0 1430 aaKnown RBP9.33□□□□□ -0.92
TNFSF4-203ENST00000488053 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
TNFSF4-203ENST00000488053 PHTF2Q8N3S3 785 aa9.33□□□□□ -0.92
TNFSF4-203ENST00000488053 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
TNFSF4-203ENST00000488053 ABCC11Q96J66 1382 aa9.33□□□□□ -0.92
TNFSF4-203ENST00000488053 ATRNO75882 1429 aa9.32□□□□□ -0.92
TNFSF4-203ENST00000488053 ERVH48-1M5A8F1 160 aa9.32□□□□□ -0.92
TNFSF4-203ENST00000488053 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
TNFSF4-203ENST00000488053 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
TNFSF4-203ENST00000488053 HPS1Q92902 700 aa9.32□□□□□ -0.92
TNFSF4-203ENST00000488053 AVPP01185 164 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 CFAP70Q5T0N1 1121 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 UCN2Q96RP3 112 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 DOLKQ9UPQ8 538 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 PCDHB11Q9Y5F2 797 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 ATAD2Q6PL18 1390 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 BCL9LQ86UU0 1499 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 KIF1AQ12756 1690 aa9.31□□□□□ -0.92
TNFSF4-203ENST00000488053 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
TNFSF4-203ENST00000488053 KRT28Q7Z3Y7 464 aa9.3□□□□□ -0.92
TNFSF4-203ENST00000488053 PLPP7Q8NBV4 271 aa9.3□□□□□ -0.92
TNFSF4-203ENST00000488053 CCDC97Q96F63 343 aaPredicted RBP9.3□□□□□ -0.92
TNFSF4-203ENST00000488053 CCDC85AQ96PX6 553 aaPredicted RBP9.3□□□□□ -0.92
TNFSF4-203ENST00000488053 EP400Q96L91 3159 aa9.3□□□□□ -0.92
TNFSF4-203ENST00000488053 SPATA31A3Q5VYP0 1347 aa9.3□□□□□ -0.92
TNFSF4-203ENST00000488053 PIK3CDO00329 1044 aa9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 ATP9BO43861 1147 aa9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 SKIP12755 728 aa9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 PRAM1Q96QH2 718 aa9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 KLF16Q9BXK1 252 aaPredicted RBP9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 C14orf93Q9H972 538 aaKnown RBP9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 SERPINA10Q9UK55 444 aa9.29□□□□□ -0.92
TNFSF4-203ENST00000488053 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 USP32Q8NFA0 1604 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 RAB3GAP2Q9H2M9 1393 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 ZIC2O95409 532 aaPredicted RBP9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 TIMP2P16035 220 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 MYT1Q01538 1121 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 ITPKCQ96DU7 683 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 BRWD3Q6RI45 1802 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 GLI3P10071 1580 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 NRXN1Q9ULB1 1477 aa9.28□□□□□ -0.92
TNFSF4-203ENST00000488053 TBC1D9Q6ZT07 1266 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 UNC5CLQ8IV45 518 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 ZNF784Q8NCA9 323 aaPredicted RBP9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 PMFBP1Q8TBY8 1022 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 HIRIP3Q9BW71 556 aaPredicted RBP9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 PPP1R12CQ9BZL4 782 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 TMPRSS4Q9NRS4 437 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 POGKQ9P215 609 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 TNS3Q68CZ2 1445 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 ABCA3Q99758 1704 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 RALGAPBQ86X10 1494 aa9.27□□□□□ -0.93
TNFSF4-203ENST00000488053 PLCH1Q4KWH8 1693 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 SLIT2O94813 1529 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 PALM3A6NDB9 673 aaPredicted RBP9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 CAPN5O15484 640 aaPredicted RBP9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 MYCP01106 439 aaPredicted RBP9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 ERVK-9P63128 1117 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 PSME1Q06323 249 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 CRIPAKQ8N1N5 446 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 TFIP11Q9UBB9 837 aaKnown RBP9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 TRAK1Q9UPV9 953 aa9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 CCDC9Q9Y3X0 531 aaKnown RBP9.26□□□□□ -0.93
TNFSF4-203ENST00000488053 USP4Q13107 963 aa9.25□□□□□ -0.93
TNFSF4-203ENST00000488053 TSGA10IPQ3SY00 556 aa9.25□□□□□ -0.93
TNFSF4-203ENST00000488053 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
TNFSF4-203ENST00000488053 CC2D2BQ6DHV5 1058 aa9.25□□□□□ -0.93
TNFSF4-203ENST00000488053 TRAF7Q6Q0C0 670 aa9.25□□□□□ -0.93
TNFSF4-203ENST00000488053 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
TNFSF4-203ENST00000488053 MAFBQ9Y5Q3 323 aaPredicted RBP9.25□□□□□ -0.93
TNFSF4-203ENST00000488053 SRCAPQ6ZRS2 3230 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 AXIN1O15169 862 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 LILRA1O75019 489 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 EML3Q32P44 896 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 DLC1Q96QB1 1528 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 ADGRB1O14514 1584 aa9.24□□□□□ -0.93
TNFSF4-203ENST00000488053 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
TNFSF4-203ENST00000488053 Q6ZNB5 142 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms