RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 CUX1P39880 1505 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 C11orf95C9JLR9 678 aaPredicted RBP17.61■□□□□ 0.41
PKD1-220ENST00000487932 CALM1P0DP23 149 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 CALM2P0DP24 149 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 CALM3P0DP25 149 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 EXOC1Q9NV70 894 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 ZFP91Q96JP5 570 aaPredicted RBP17.61■□□□□ 0.41
PKD1-220ENST00000487932 PSMC4P43686 418 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 SP4Q02446 784 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 CCDC63Q8NA47 563 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 TRERF1Q96PN7 1200 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 HEATR3Q7Z4Q2 680 aa17.61■□□□□ 0.41
PKD1-220ENST00000487932 HMGB1P09429 215 aaKnown RBP17.61■□□□□ 0.41
PKD1-220ENST00000487932 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
PKD1-220ENST00000487932 PROCA1Q8NCQ7 364 aaPredicted RBP17.61■□□□□ 0.41
PKD1-220ENST00000487932 SRRTQ9BXP5 876 aaKnown RBP17.61■□□□□ 0.41
PKD1-220ENST00000487932 ZWINTO95229 277 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 NAA15Q9BXJ9 866 aaKnown RBP17.6■□□□□ 0.41
PKD1-220ENST00000487932 BMS1Q14692 1282 aaKnown RBP17.6■□□□□ 0.41
PKD1-220ENST00000487932 ZSWIM4Q9H7M6 989 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 METAP2P50579 478 aaKnown RBP eCLIP17.6■□□□□ 0.411e-6■■■■□ 20.8
PKD1-220ENST00000487932 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 CTR9Q6PD62 1173 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 SPATA24Q86W54 205 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 DNAAF4Q8WXU2 420 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 PRDM10Q9NQV6 1147 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 MCM3P25205 808 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
PKD1-220ENST00000487932 RFX1P22670 979 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 NME9Q86XW9 330 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 OGFOD1Q8N543 542 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 NSD3Q9BZ95 1437 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 CRNKL1Q9BZJ0 848 aaKnown RBP17.59■□□□□ 0.41
PKD1-220ENST00000487932 SLC52A1Q9NWF4 448 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 CCDC183Q5T5S1 534 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 TRIM47Q96LD4 638 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 CWC25Q9NXE8 425 aaPredicted RBP17.59■□□□□ 0.41
PKD1-220ENST00000487932 IL27Q8NEV9 243 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 KIF18AQ8NI77 898 aa17.59■□□□□ 0.41
PKD1-220ENST00000487932 EEF2P13639 858 aaKnown RBP17.58■□□□□ 0.41
PKD1-220ENST00000487932 AFMP43652 599 aa17.58■□□□□ 0.41
PKD1-220ENST00000487932 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.41
PKD1-220ENST00000487932 KIAA0753Q2KHM9 967 aa17.58■□□□□ 0.41
PKD1-220ENST00000487932 HSP90AA4PQ58FG1 418 aa17.58■□□□□ 0.41
PKD1-220ENST00000487932 FAM114A1Q8IWE2 563 aa17.58■□□□□ 0.41
PKD1-220ENST00000487932 GSTA5Q7RTV2 222 aa17.58■□□□□ 0.4
PKD1-220ENST00000487932 HYPKQ9NX55 129 aa17.58■□□□□ 0.4
PKD1-220ENST00000487932 NAIPQ13075 1403 aa17.58■□□□□ 0.4
PKD1-220ENST00000487932 SREK1Q8WXA9 508 aaKnown RBP17.58■□□□□ 0.4
PKD1-220ENST00000487932 TIGD1Q96MW7 591 aa17.58■□□□□ 0.4
PKD1-220ENST00000487932 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.4
PKD1-220ENST00000487932 GDPD2Q9HCC8 539 aa17.58■□□□□ 0.4
PKD1-220ENST00000487932 GSTO1P78417 241 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 NCBP1Q09161 790 aaKnown RBP17.57■□□□□ 0.4
PKD1-220ENST00000487932 KRT28Q7Z3Y7 464 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 IQCGQ9H095 443 aaKnown RBP17.57■□□□□ 0.4
PKD1-220ENST00000487932 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
PKD1-220ENST00000487932 RBM25P49756 843 aaKnown RBP17.57■□□□□ 0.4
PKD1-220ENST00000487932 C8orf37Q96NL8 207 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 RIMBP2O15034 1052 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 GJB2P29033 226 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 SIRT1Q96EB6 747 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 SCAND2PQ9GZW5 306 aaPredicted RBP17.57■□□□□ 0.4
PKD1-220ENST00000487932 ZNF408Q9H9D4 720 aa17.57■□□□□ 0.4
PKD1-220ENST00000487932 C6orf163Q5TEZ5 329 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 SMARCC2Q8TAQ2 1214 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 KRT13P13646 458 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 ATP6V1AP38606 617 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 ARID5AQ03989 594 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 PHF8Q9UPP1 1060 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 CYP7A1P22680 504 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 ERMNQ8TAM6 284 aa17.56■□□□□ 0.4
PKD1-220ENST00000487932 C16orf45Q96MC5 204 aaPredicted RBP17.55■□□□□ 0.4
PKD1-220ENST00000487932 ATAD2Q6PL18 1390 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 CCDC50Q8IVM0 306 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 ZBTB9Q96C00 473 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 IFIT1BQ5T764 474 aaKnown RBP17.55■□□□□ 0.4
PKD1-220ENST00000487932 ORC3Q9UBD5 711 aaPredicted RBP17.55■□□□□ 0.4
PKD1-220ENST00000487932 ODF2LQ9ULJ1 636 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 CCDC152Q4G0S7 254 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 RRAGBQ5VZM2 374 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 FBF1Q8TES7 1133 aa17.55■□□□□ 0.4
PKD1-220ENST00000487932 MCM4P33991 863 aa17.54■□□□□ 0.4
PKD1-220ENST00000487932 MICALCLQ6ZW33 695 aa17.54■□□□□ 0.4
PKD1-220ENST00000487932 CEBPAP49715 358 aaPredicted RBP17.54■□□□□ 0.4
PKD1-220ENST00000487932 SH2B1Q9NRF2 756 aaPredicted RBP17.54■□□□□ 0.4
PKD1-220ENST00000487932 SMARCC1Q92922 1105 aaPredicted RBP17.54■□□□□ 0.4
PKD1-220ENST00000487932 SLC4A4Q9Y6R1 1079 aa17.54■□□□□ 0.4
PKD1-220ENST00000487932 STAT6P42226 847 aa17.54■□□□□ 0.4
PKD1-220ENST00000487932 GJA3Q9Y6H8 435 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 CEP112Q8N8E3 955 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms