RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 EXOSC9Q06265 439 aaKnown RBP15.66■□□□□ 0.1
SFXN3-206ENST00000487721 CNKSR1Q969H4 720 aa15.66■□□□□ 0.1
SFXN3-206ENST00000487721 UTP14AQ9BVJ6 771 aaKnown RBP15.66■□□□□ 0.1
SFXN3-206ENST00000487721 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
SFXN3-206ENST00000487721 SUSD4Q5VX71 490 aa15.65■□□□□ 0.1
SFXN3-206ENST00000487721 MASTLQ96GX5 879 aa15.65■□□□□ 0.1
SFXN3-206ENST00000487721 RNF123Q5XPI4 1314 aa15.65■□□□□ 0.1
SFXN3-206ENST00000487721 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
SFXN3-206ENST00000487721 IBTKQ9P2D0 1353 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-206ENST00000487721 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
SFXN3-206ENST00000487721 VEGFAP15692 232 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-206ENST00000487721 NPR1P16066 1061 aa15.64■□□□□ 0.09
SFXN3-206ENST00000487721 STYK1Q6J9G0 422 aa15.64■□□□□ 0.09
SFXN3-206ENST00000487721 SMC1BQ8NDV3 1235 aa15.64■□□□□ 0.09
SFXN3-206ENST00000487721 KLRG1Q96E93 195 aa15.64■□□□□ 0.09
SFXN3-206ENST00000487721 PHAXQ9H814 394 aaKnown RBP15.64■□□□□ 0.09
SFXN3-206ENST00000487721 TRMT112Q9UI30 125 aaKnown RBP15.64■□□□□ 0.09
SFXN3-206ENST00000487721 UBN2Q6ZU65 1347 aa15.64■□□□□ 0.09
SFXN3-206ENST00000487721 SRGNP10124 158 aa15.63■□□□□ 0.09
SFXN3-206ENST00000487721 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
SFXN3-206ENST00000487721 ERFEQ4G0M1 354 aa15.63■□□□□ 0.09
SFXN3-206ENST00000487721 NLRP10Q86W26 655 aa15.63■□□□□ 0.09
SFXN3-206ENST00000487721 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
SFXN3-206ENST00000487721 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
SFXN3-206ENST00000487721 ZNF521Q96K83 1311 aa15.63■□□□□ 0.09
SFXN3-206ENST00000487721 KLRG2A4D1S0 409 aaPredicted RBP15.62■□□□□ 0.09
SFXN3-206ENST00000487721 NFKBIEO00221 500 aa15.62■□□□□ 0.09
SFXN3-206ENST00000487721 C21orf2O43822 256 aa15.62■□□□□ 0.09
SFXN3-206ENST00000487721 VAMP4O75379 141 aa15.62■□□□□ 0.09
SFXN3-206ENST00000487721 NTSR2O95665 410 aa15.62■□□□□ 0.09
SFXN3-206ENST00000487721 HSP90B1P14625 803 aaKnown RBP15.62■□□□□ 0.09
SFXN3-206ENST00000487721 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
SFXN3-206ENST00000487721 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
SFXN3-206ENST00000487721 NEXNQ0ZGT2 675 aa15.61■□□□□ 0.09
SFXN3-206ENST00000487721 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
SFXN3-206ENST00000487721 SOGA3Q5TF21 947 aa15.61■□□□□ 0.09
SFXN3-206ENST00000487721 DPY19L2Q6NUT2 758 aa15.61■□□□□ 0.09
SFXN3-206ENST00000487721 RPGRQ92834 1020 aaKnown RBP15.61■□□□□ 0.09
SFXN3-206ENST00000487721 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
SFXN3-206ENST00000487721 BCORQ6W2J9 1755 aa15.61■□□□□ 0.09
SFXN3-206ENST00000487721 NRXN2Q9P2S2 1712 aa15.6■□□□□ 0.09
SFXN3-206ENST00000487721 ATP5J2-PTCD1G3V325 749 aa15.6■□□□□ 0.09
SFXN3-206ENST00000487721 KSR2Q6VAB6 950 aa15.6■□□□□ 0.09
SFXN3-206ENST00000487721 JMYQ8N9B5 988 aa15.6■□□□□ 0.09
SFXN3-206ENST00000487721 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
SFXN3-206ENST00000487721 ISCA1Q9BUE6 129 aa15.6■□□□□ 0.09
SFXN3-206ENST00000487721 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
SFXN3-206ENST00000487721 AFDNP55196 1824 aaKnown RBP15.59■□□□□ 0.09
SFXN3-206ENST00000487721 SBF1O95248 1867 aa15.59■□□□□ 0.09
SFXN3-206ENST00000487721 SLFN5Q08AF3 891 aa15.59■□□□□ 0.09
SFXN3-206ENST00000487721 SLC10A5Q5PT55 438 aa15.59■□□□□ 0.09
SFXN3-206ENST00000487721 MYD88Q99836 296 aa15.59■□□□□ 0.09
SFXN3-206ENST00000487721 METTL22Q9BUU2 404 aaPredicted RBP15.59■□□□□ 0.09
SFXN3-206ENST00000487721 TMX4Q9H1E5 349 aaPredicted RBP15.59■□□□□ 0.09
SFXN3-206ENST00000487721 MAP3K2Q9Y2U5 619 aa15.59■□□□□ 0.09
SFXN3-206ENST00000487721 PI4KAP2A4QPH2 592 aa15.58■□□□□ 0.08
SFXN3-206ENST00000487721 POTECB2RU33 542 aa15.58■□□□□ 0.08
SFXN3-206ENST00000487721 FLIIQ13045 1269 aa15.58■□□□□ 0.08
SFXN3-206ENST00000487721 FKBP5Q13451 457 aaPredicted RBP15.58■□□□□ 0.08
SFXN3-206ENST00000487721 PRPF40BQ6NWY9 871 aaKnown RBP15.58■□□□□ 0.08
SFXN3-206ENST00000487721 PI4KAP1Q8N8J0 262 aa15.58■□□□□ 0.08
SFXN3-206ENST00000487721 CCDC191Q8NCU4 936 aa15.58■□□□□ 0.08
SFXN3-206ENST00000487721 CRY2Q49AN0 593 aa15.57■□□□□ 0.08
SFXN3-206ENST00000487721 ZNF428Q96B54 188 aa15.57■□□□□ 0.08
SFXN3-206ENST00000487721 CWC25Q9NXE8 425 aaPredicted RBP15.57■□□□□ 0.08
SFXN3-206ENST00000487721 RIC1Q4ADV7 1423 aa15.57■□□□□ 0.08
SFXN3-206ENST00000487721 HOXA10P31260 410 aaPredicted RBP15.56■□□□□ 0.08
SFXN3-206ENST00000487721 ABCC12Q96J65 1359 aa15.56■□□□□ 0.08
SFXN3-206ENST00000487721 CACNA1FO60840 1977 aa15.55■□□□□ 0.08
SFXN3-206ENST00000487721 HCLS1P14317 486 aaPredicted RBP15.55■□□□□ 0.08
SFXN3-206ENST00000487721 HNRNPUQ00839 825 aaKnown RBP eCLIP15.55■□□□□ 0.08
SFXN3-206ENST00000487721 DDX46Q7L014 1031 aaKnown RBP15.55■□□□□ 0.08
SFXN3-206ENST00000487721 G2E3Q7L622 706 aa15.55■□□□□ 0.08
SFXN3-206ENST00000487721 ZBTB38Q8NAP3 1195 aaPredicted RBP15.55■□□□□ 0.08
SFXN3-206ENST00000487721 FAM89AQ96GI7 184 aa15.55■□□□□ 0.08
SFXN3-206ENST00000487721 CRAMP1Q96RY5 1269 aa15.55■□□□□ 0.08
SFXN3-206ENST00000487721 TAOK3Q9H2K8 898 aa15.55■□□□□ 0.08
SFXN3-206ENST00000487721 WDR90Q96KV7 1748 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 LTBP3Q9NS15 1303 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 CT47B1P0C2W7 299 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-206ENST00000487721 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 CCDC93Q567U6 631 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 COL13A1Q5TAT6 717 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-206ENST00000487721 CC2D2BQ6DHV5 1058 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 RTKN2Q8IZC4 609 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 DNAAF4Q8WXU2 420 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
SFXN3-206ENST00000487721 IRS4O14654 1257 aaPredicted RBP15.53■□□□□ 0.08
SFXN3-206ENST00000487721 PCCAP05165 728 aaPredicted RBP15.53■□□□□ 0.08
SFXN3-206ENST00000487721 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
SFXN3-206ENST00000487721 TNRC6CQ9HCJ0 1690 aaKnown RBP15.53■□□□□ 0.08
SFXN3-206ENST00000487721 BBOX1O75936 387 aa15.52■□□□□ 0.08
SFXN3-206ENST00000487721 DDNO94850 711 aaPredicted RBP15.52■□□□□ 0.08
SFXN3-206ENST00000487721 TRMT2AQ8IZ69 625 aaKnown RBP15.52■□□□□ 0.08
SFXN3-206ENST00000487721 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
SFXN3-206ENST00000487721 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.07
SFXN3-206ENST00000487721 PPEF1O14829 653 aaPredicted RBP15.51■□□□□ 0.07
SFXN3-206ENST00000487721 ALDH1L2Q3SY69 923 aa15.51■□□□□ 0.07
SFXN3-206ENST00000487721 C3orf67Q6ZVT6 689 aa15.51■□□□□ 0.07
SFXN3-206ENST00000487721 LINS1Q8NG48 757 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms