RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
SGIP1-212ENST00000487507 SNED1Q8TER0 1413 aa16.93■□□□□ 0.3
SGIP1-212ENST00000487507 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
SGIP1-212ENST00000487507 FAM155AB1AL88 458 aaPredicted RBP16.91■□□□□ 0.3
SGIP1-212ENST00000487507 USP48Q86UV5 1035 aa16.91■□□□□ 0.3
SGIP1-212ENST00000487507 HMOX1P09601 288 aa16.9■□□□□ 0.3
SGIP1-212ENST00000487507 GTF2E1P29083 439 aaPredicted RBP16.9■□□□□ 0.3
SGIP1-212ENST00000487507 GMPSP49915 693 aaPredicted RBP16.9■□□□□ 0.3
SGIP1-212ENST00000487507 RGMBQ6NW40 437 aa16.9■□□□□ 0.3
SGIP1-212ENST00000487507 TPTE2Q6XPS3 522 aa16.9■□□□□ 0.3
SGIP1-212ENST00000487507 KLRG2A4D1S0 409 aaPredicted RBP16.89■□□□□ 0.29
SGIP1-212ENST00000487507 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
SGIP1-212ENST00000487507 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.29
SGIP1-212ENST00000487507 HIRAP54198 1017 aaPredicted RBP16.89■□□□□ 0.29
SGIP1-212ENST00000487507 AOC3Q16853 763 aa16.89■□□□□ 0.29
SGIP1-212ENST00000487507 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
SGIP1-212ENST00000487507 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
SGIP1-212ENST00000487507 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
SGIP1-212ENST00000487507 ZNF157P51786 506 aaPredicted RBP16.88■□□□□ 0.29
SGIP1-212ENST00000487507 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
SGIP1-212ENST00000487507 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
SGIP1-212ENST00000487507 NPC1L1Q9UHC9 1359 aa16.88■□□□□ 0.29
SGIP1-212ENST00000487507 NUP98P52948 1817 aa16.87■□□□□ 0.29
SGIP1-212ENST00000487507 SHTN1A0MZ66 631 aa16.87■□□□□ 0.29
SGIP1-212ENST00000487507 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
SGIP1-212ENST00000487507 BCL2L13Q9BXK5 485 aa16.87■□□□□ 0.29
SGIP1-212ENST00000487507 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
SGIP1-212ENST00000487507 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
SGIP1-212ENST00000487507 DLL1O00548 723 aa16.86■□□□□ 0.29
SGIP1-212ENST00000487507 CXCL9Q07325 125 aa16.86■□□□□ 0.29
SGIP1-212ENST00000487507 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
SGIP1-212ENST00000487507 IL13P35225 146 aa16.85■□□□□ 0.29
SGIP1-212ENST00000487507 NUTM1Q86Y26 1132 aa16.85■□□□□ 0.29
SGIP1-212ENST00000487507 RPGRQ92834 1020 aaKnown RBP16.85■□□□□ 0.29
SGIP1-212ENST00000487507 CCDC102AQ96A19 550 aa16.85■□□□□ 0.29
SGIP1-212ENST00000487507 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
SGIP1-212ENST00000487507 GBA2Q9HCG7 927 aaPredicted RBP16.85■□□□□ 0.29
SGIP1-212ENST00000487507 PGAP2Q9UHJ9 254 aa16.85■□□□□ 0.29
SGIP1-212ENST00000487507 ABCC12Q96J65 1359 aa16.85■□□□□ 0.29
SGIP1-212ENST00000487507 TEFQ10587 303 aa16.84■□□□□ 0.29
SGIP1-212ENST00000487507 CC2D2BQ6DHV5 1058 aa16.84■□□□□ 0.29
SGIP1-212ENST00000487507 C2orf69Q8N8R5 385 aa16.84■□□□□ 0.29
SGIP1-212ENST00000487507 RAD17O75943 681 aa16.83■□□□□ 0.28
SGIP1-212ENST00000487507 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
SGIP1-212ENST00000487507 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.28
SGIP1-212ENST00000487507 MKI67P46013 3256 aaKnown RBP16.82■□□□□ 0.28
SGIP1-212ENST00000487507 ADM5C9JUS6 153 aa16.82■□□□□ 0.28
SGIP1-212ENST00000487507 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
SGIP1-212ENST00000487507 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
SGIP1-212ENST00000487507 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
SGIP1-212ENST00000487507 ZC3H15Q8WU90 426 aaKnown RBP16.82■□□□□ 0.28
SGIP1-212ENST00000487507 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
SGIP1-212ENST00000487507 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
SGIP1-212ENST00000487507 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
SGIP1-212ENST00000487507 KCNQ3O43525 872 aa16.81■□□□□ 0.28
SGIP1-212ENST00000487507 TBC1D8O95759 1140 aa16.81■□□□□ 0.28
SGIP1-212ENST00000487507 ZNF296Q8WUU4 475 aaPredicted RBP16.81■□□□□ 0.28
SGIP1-212ENST00000487507 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
SGIP1-212ENST00000487507 TAF1P21675 1872 aa16.8■□□□□ 0.28
SGIP1-212ENST00000487507 SLC10A3P09131 477 aa16.8■□□□□ 0.28
SGIP1-212ENST00000487507 HLFQ16534 295 aa16.8■□□□□ 0.28
SGIP1-212ENST00000487507 CRY2Q49AN0 593 aa16.8■□□□□ 0.28
SGIP1-212ENST00000487507 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
SGIP1-212ENST00000487507 SAMD7Q7Z3H4 446 aa16.79■□□□□ 0.28
SGIP1-212ENST00000487507 RBBP6Q7Z6E9 1792 aaKnown RBP16.79■□□□□ 0.28
SGIP1-212ENST00000487507 TBC1D10BQ4KMP7 808 aaPredicted RBP16.78■□□□□ 0.28
SGIP1-212ENST00000487507 MICALL2Q8IY33 904 aa16.78■□□□□ 0.28
SGIP1-212ENST00000487507 POTEFA5A3E0 1075 aa16.77■□□□□ 0.28
SGIP1-212ENST00000487507 H7C1D1 291 aa16.77■□□□□ 0.28
SGIP1-212ENST00000487507 RBM26Q5T8P6 1007 aaKnown RBP16.77■□□□□ 0.28
SGIP1-212ENST00000487507 FBXO46Q6PJ61 603 aaPredicted RBP16.77■□□□□ 0.28
SGIP1-212ENST00000487507 IL17REQ8NFR9 667 aa16.77■□□□□ 0.28
SGIP1-212ENST00000487507 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.28
SGIP1-212ENST00000487507 COLQQ9Y215 455 aaPredicted RBP16.77■□□□□ 0.28
SGIP1-212ENST00000487507 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
SGIP1-212ENST00000487507 LAMB2P55268 1798 aa16.77■□□□□ 0.27
SGIP1-212ENST00000487507 TNIP1Q15025 636 aa16.76■□□□□ 0.27
SGIP1-212ENST00000487507 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
SGIP1-212ENST00000487507 SLC17A8Q8NDX2 589 aa16.76■□□□□ 0.27
SGIP1-212ENST00000487507 RBM17Q96I25 401 aaKnown RBP16.76■□□□□ 0.27
SGIP1-212ENST00000487507 CDHR2Q9BYE9 1310 aa16.75■□□□□ 0.27
SGIP1-212ENST00000487507 SZT2Q5T011 3432 aa16.75■□□□□ 0.27
SGIP1-212ENST00000487507 EGFRP00533 1210 aa16.75■□□□□ 0.27
SGIP1-212ENST00000487507 RASAL3Q86YV0 1011 aa16.75■□□□□ 0.27
SGIP1-212ENST00000487507 NGEFQ8N5V2 710 aa16.75■□□□□ 0.27
SGIP1-212ENST00000487507 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
SGIP1-212ENST00000487507 KIAA0100Q14667 2235 aaKnown RBP16.74■□□□□ 0.27
SGIP1-212ENST00000487507 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
SGIP1-212ENST00000487507 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
SGIP1-212ENST00000487507 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
SGIP1-212ENST00000487507 DCPSQ96C86 337 aaKnown RBP16.74■□□□□ 0.27
SGIP1-212ENST00000487507 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
SGIP1-212ENST00000487507 PANK3Q9H999 370 aa16.74■□□□□ 0.27
SGIP1-212ENST00000487507 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
SGIP1-212ENST00000487507 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
SGIP1-212ENST00000487507 GPTP24298 496 aa16.73■□□□□ 0.27
SGIP1-212ENST00000487507 NBPF10Q6P3W6 841 aaKnown RBP16.73■□□□□ 0.27
SGIP1-212ENST00000487507 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
SGIP1-212ENST00000487507 CRAMP1Q96RY5 1269 aa16.73■□□□□ 0.27
SGIP1-212ENST00000487507 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms