RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 LRP10Q7Z4F1 713 aa13.71□□□□□ -0.21
TOP3B-216ENST00000487485 DZIP3Q86Y13 1208 aaKnown RBP13.71□□□□□ -0.21
TOP3B-216ENST00000487485 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.21
TOP3B-216ENST00000487485 STK31Q9BXU1 1019 aa13.71□□□□□ -0.21
TOP3B-216ENST00000487485 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
TOP3B-216ENST00000487485 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
TOP3B-216ENST00000487485 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
TOP3B-216ENST00000487485 HYPKQ9NX55 129 aa13.7□□□□□ -0.22
TOP3B-216ENST00000487485 ANKRD31Q8N7Z5 1873 aa13.7□□□□□ -0.22
TOP3B-216ENST00000487485 NUP98P52948 1817 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 BCORQ6W2J9 1755 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
TOP3B-216ENST00000487485 PDE6BP35913 854 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
TOP3B-216ENST00000487485 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 XAGE3Q8WTP9 111 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
TOP3B-216ENST00000487485 FER1L6Q2WGJ9 1857 aa13.69□□□□□ -0.22
TOP3B-216ENST00000487485 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
TOP3B-216ENST00000487485 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
TOP3B-216ENST00000487485 SLX4Q8IY92 1834 aa13.68□□□□□ -0.22
TOP3B-216ENST00000487485 LTBP3Q9NS15 1303 aa13.67□□□□□ -0.22
TOP3B-216ENST00000487485 SCN7AQ01118 1682 aa13.67□□□□□ -0.22
TOP3B-216ENST00000487485 CAMTA2O94983 1202 aa13.67□□□□□ -0.22
TOP3B-216ENST00000487485 PRDM10Q9NQV6 1147 aa13.67□□□□□ -0.22
TOP3B-216ENST00000487485 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
TOP3B-216ENST00000487485 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 VEGFBP49765 207 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 G2E3Q7L622 706 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 CNKSR1Q969H4 720 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 ZBTB3Q9H5J0 574 aa13.66□□□□□ -0.22
TOP3B-216ENST00000487485 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
TOP3B-216ENST00000487485 SRGNP10124 158 aa13.65□□□□□ -0.22
TOP3B-216ENST00000487485 HLFQ16534 295 aa13.65□□□□□ -0.22
TOP3B-216ENST00000487485 STYK1Q6J9G0 422 aa13.65□□□□□ -0.22
TOP3B-216ENST00000487485 PRPF40BQ6NWY9 871 aaKnown RBP13.65□□□□□ -0.22
TOP3B-216ENST00000487485 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
TOP3B-216ENST00000487485 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
TOP3B-216ENST00000487485 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
TOP3B-216ENST00000487485 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
TOP3B-216ENST00000487485 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
TOP3B-216ENST00000487485 COL11A2P13942 1736 aaPredicted RBP13.64□□□□□ -0.23
TOP3B-216ENST00000487485 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
TOP3B-216ENST00000487485 ITGBL1O95965 494 aaPredicted RBP13.64□□□□□ -0.23
TOP3B-216ENST00000487485 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
TOP3B-216ENST00000487485 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
TOP3B-216ENST00000487485 CLEC4GQ6UXB4 293 aa13.64□□□□□ -0.23
TOP3B-216ENST00000487485 CNBD1Q8NA66 436 aa13.64□□□□□ -0.23
TOP3B-216ENST00000487485 PLBD2Q8NHP8 589 aa13.64□□□□□ -0.23
TOP3B-216ENST00000487485 C7orf43Q8WVR3 580 aa13.64□□□□□ -0.23
TOP3B-216ENST00000487485 BCL2L13Q9BXK5 485 aa13.64□□□□□ -0.23
TOP3B-216ENST00000487485 ZNF652Q9Y2D9 606 aa13.64□□□□□ -0.23
TOP3B-216ENST00000487485 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 IQCA1LA6NCM1 817 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 TMEM88BA6NKF7 163 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 RGL2O15211 777 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 NPHP1O15259 732 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
TOP3B-216ENST00000487485 LBX1P52954 281 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 FLIIQ13045 1269 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
TOP3B-216ENST00000487485 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 AIDAQ96BJ3 306 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
TOP3B-216ENST00000487485 SMC4Q9NTJ3 1288 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 WBP1LQ9NX94 342 aa13.63□□□□□ -0.23
TOP3B-216ENST00000487485 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
TOP3B-216ENST00000487485 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
TOP3B-216ENST00000487485 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 PI4KAP2A4QPH2 592 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 ST5P78524 1137 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 SOGA3Q5TF21 947 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 KSR2Q6VAB6 950 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 ZNF277Q9NRM2 450 aaPredicted RBP13.61□□□□□ -0.23
TOP3B-216ENST00000487485 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 MAP3K2Q9Y2U5 619 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
TOP3B-216ENST00000487485 SCN4AP35499 1836 aa13.6□□□□□ -0.23
TOP3B-216ENST00000487485 BCAR3O75815 825 aa13.6□□□□□ -0.23
TOP3B-216ENST00000487485 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
TOP3B-216ENST00000487485 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
TOP3B-216ENST00000487485 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
TOP3B-216ENST00000487485 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
TOP3B-216ENST00000487485 NIP7Q9Y221 180 aaKnown RBP eCLIP13.6□□□□□ -0.23
TOP3B-216ENST00000487485 GPTP24298 496 aa13.59□□□□□ -0.23
TOP3B-216ENST00000487485 EPHX2P34913 555 aa13.59□□□□□ -0.23
TOP3B-216ENST00000487485 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
TOP3B-216ENST00000487485 CCDC93Q567U6 631 aa13.59□□□□□ -0.23
TOP3B-216ENST00000487485 METTL22Q9BUU2 404 aaPredicted RBP13.59□□□□□ -0.23
TOP3B-216ENST00000487485 HACL1Q9UJ83 578 aa13.59□□□□□ -0.23
TOP3B-216ENST00000487485 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms