RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 CCDC184Q52MB2 194 aa24.83■■□□□ 1.57
CLIP2-206ENST00000487091 HOXA10P31260 410 aaPredicted RBP24.82■■□□□ 1.56
CLIP2-206ENST00000487091 GNAI1P63096 354 aa24.82■■□□□ 1.56
CLIP2-206ENST00000487091 DUSP27Q5VZP5 1158 aa24.82■■□□□ 1.56
CLIP2-206ENST00000487091 DPY19L2Q6NUT2 758 aa24.82■■□□□ 1.56
CLIP2-206ENST00000487091 RTKN2Q8IZC4 609 aa24.82■■□□□ 1.56
CLIP2-206ENST00000487091 UTP14AQ9BVJ6 771 aaKnown RBP24.82■■□□□ 1.56
CLIP2-206ENST00000487091 CHPF2Q9P2E5 772 aa24.82■■□□□ 1.56
CLIP2-206ENST00000487091 DBF4Q9UBU7 674 aaPredicted RBP24.82■■□□□ 1.56
CLIP2-206ENST00000487091 CEP350Q5VT06 3117 aa24.81■■□□□ 1.56
CLIP2-206ENST00000487091 RNF123Q5XPI4 1314 aa24.81■■□□□ 1.56
CLIP2-206ENST00000487091 VEGFAP15692 232 aaPredicted RBP24.8■■□□□ 1.56
CLIP2-206ENST00000487091 FKBP4Q02790 459 aaKnown RBP eCLIP24.8■■□□□ 1.56
CLIP2-206ENST00000487091 TCIRG1Q13488 830 aa24.8■■□□□ 1.56
CLIP2-206ENST00000487091 SLC10A5Q5PT55 438 aa24.8■■□□□ 1.56
CLIP2-206ENST00000487091 RPGRQ92834 1020 aaKnown RBP24.8■■□□□ 1.56
CLIP2-206ENST00000487091 FSTL1Q12841 308 aa24.79■■□□□ 1.56
CLIP2-206ENST00000487091 ANKRD36CQ5JPF3 1778 aa24.79■■□□□ 1.56
CLIP2-206ENST00000487091 ANP32CO43423 234 aa24.78■■□□□ 1.56
CLIP2-206ENST00000487091 CC2D2BQ6DHV5 1058 aa24.78■■□□□ 1.56
CLIP2-206ENST00000487091 RBM17Q96I25 401 aaKnown RBP24.78■■□□□ 1.56
CLIP2-206ENST00000487091 NLRP3Q96P20 1036 aa24.78■■□□□ 1.56
CLIP2-206ENST00000487091 CRAMP1Q96RY5 1269 aa24.78■■□□□ 1.56
CLIP2-206ENST00000487091 HYPKQ9NX55 129 aa24.78■■□□□ 1.56
CLIP2-206ENST00000487091 NLRP10Q86W26 655 aa24.77■■□□□ 1.56
CLIP2-206ENST00000487091 PLBD2Q8NHP8 589 aa24.77■■□□□ 1.56
CLIP2-206ENST00000487091 APLP1P51693 650 aa24.76■■□□□ 1.55
CLIP2-206ENST00000487091 OLFM4Q6UX06 510 aa24.76■■□□□ 1.55
CLIP2-206ENST00000487091 ANKRD13DQ6ZTN6 518 aa24.76■■□□□ 1.55
CLIP2-206ENST00000487091 WDR90Q96KV7 1748 aa24.75■■□□□ 1.55
CLIP2-206ENST00000487091 GRIPAP1Q4V328 841 aa24.75■■□□□ 1.55
CLIP2-206ENST00000487091 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
CLIP2-206ENST00000487091 C3orf67Q6ZVT6 689 aa24.74■■□□□ 1.55
CLIP2-206ENST00000487091 PSMD1Q99460 953 aa24.74■■□□□ 1.55
CLIP2-206ENST00000487091 CHMP4AQ9BY43 222 aa24.74■■□□□ 1.55
CLIP2-206ENST00000487091 ZNF277Q9NRM2 450 aaPredicted RBP24.74■■□□□ 1.55
CLIP2-206ENST00000487091 SNED1Q8TER0 1413 aa24.73■■□□□ 1.55
CLIP2-206ENST00000487091 POTECB2RU33 542 aa24.73■■□□□ 1.55
CLIP2-206ENST00000487091 NCBP3Q53F19 620 aaKnown RBP24.73■■□□□ 1.55
CLIP2-206ENST00000487091 SYNE4Q8N205 404 aa24.73■■□□□ 1.55
CLIP2-206ENST00000487091 MRS2Q9HD23 443 aa24.73■■□□□ 1.55
CLIP2-206ENST00000487091 TRMT112Q9UI30 125 aaKnown RBP24.73■■□□□ 1.55
CLIP2-206ENST00000487091 SH3TC1Q8TE82 1336 aa24.72■■□□□ 1.55
CLIP2-206ENST00000487091 SMC1BQ8NDV3 1235 aa24.72■■□□□ 1.55
CLIP2-206ENST00000487091 ELL2O00472 640 aaPredicted RBP24.71■■□□□ 1.55
CLIP2-206ENST00000487091 IARSP41252 1262 aaKnown RBP24.71■■□□□ 1.55
CLIP2-206ENST00000487091 C8orf58Q8NAV2 365 aa24.71■■□□□ 1.55
CLIP2-206ENST00000487091 ISCA1Q9BUE6 129 aa24.71■■□□□ 1.55
CLIP2-206ENST00000487091 PPEF1O14829 653 aaPredicted RBP24.7■■□□□ 1.54
CLIP2-206ENST00000487091 DDNO94850 711 aaPredicted RBP24.7■■□□□ 1.54
CLIP2-206ENST00000487091 HCLS1P14317 486 aaPredicted RBP24.69■■□□□ 1.54
CLIP2-206ENST00000487091 TRIM28Q13263 835 aaKnown RBP24.69■■□□□ 1.54
CLIP2-206ENST00000487091 WWC1Q8IX03 1113 aa24.69■■□□□ 1.54
CLIP2-206ENST00000487091 CCDC30Q5VVM6 783 aa24.67■■□□□ 1.54
CLIP2-206ENST00000487091 L3MBTL3Q96JM7 780 aaPredicted RBP24.67■■□□□ 1.54
CLIP2-206ENST00000487091 ABCC4O15439 1325 aa24.66■■□□□ 1.54
CLIP2-206ENST00000487091 FZD9O00144 591 aa24.66■■□□□ 1.54
CLIP2-206ENST00000487091 BBOX1O75936 387 aa24.66■■□□□ 1.54
CLIP2-206ENST00000487091 GOLGA2Q08379 1002 aa24.66■■□□□ 1.54
CLIP2-206ENST00000487091 RIC3Q7Z5B4 369 aa24.66■■□□□ 1.54
CLIP2-206ENST00000487091 TMX4Q9H1E5 349 aaPredicted RBP24.66■■□□□ 1.54
CLIP2-206ENST00000487091 PHAXQ9H814 394 aaKnown RBP24.66■■□□□ 1.54
CLIP2-206ENST00000487091 ATP6V0A2Q9Y487 856 aa24.66■■□□□ 1.54
CLIP2-206ENST00000487091 LAMB2P55268 1798 aa24.66■■□□□ 1.54
CLIP2-206ENST00000487091 IL16Q14005 1332 aa24.65■■□□□ 1.54
CLIP2-206ENST00000487091 ATP5J2-PTCD1G3V325 749 aa24.65■■□□□ 1.54
CLIP2-206ENST00000487091 IQCA1LA6NCM1 817 aa24.64■■□□□ 1.54
CLIP2-206ENST00000487091 TCERG1O14776 1098 aaKnown RBP24.64■■□□□ 1.54
CLIP2-206ENST00000487091 DDX46Q7L014 1031 aaKnown RBP24.64■■□□□ 1.54
CLIP2-206ENST00000487091 TSPYL6Q8N831 410 aa24.64■■□□□ 1.54
CLIP2-206ENST00000487091 JDP2Q8WYK2 163 aa24.64■■□□□ 1.54
CLIP2-206ENST00000487091 DNAJC5GQ8N7S2 189 aa24.63■■□□□ 1.53
CLIP2-206ENST00000487091 TSR2Q969E8 191 aaKnown RBP24.63■■□□□ 1.53
CLIP2-206ENST00000487091 SCN4AP35499 1836 aa24.63■■□□□ 1.53
CLIP2-206ENST00000487091 ZNF541Q9H0D2 1346 aa24.62■■□□□ 1.53
CLIP2-206ENST00000487091 SP8Q8IXZ3 490 aa24.62■■□□□ 1.53
CLIP2-206ENST00000487091 FAM89AQ96GI7 184 aa24.62■■□□□ 1.53
CLIP2-206ENST00000487091 VPS33BQ9H267 617 aa24.62■■□□□ 1.53
CLIP2-206ENST00000487091 DDX58O95786 925 aaKnown RBP24.61■■□□□ 1.53
CLIP2-206ENST00000487091 GRAPQ13588 217 aa24.61■■□□□ 1.53
CLIP2-206ENST00000487091 SF3B3Q15393 1217 aaKnown RBP24.61■■□□□ 1.53
CLIP2-206ENST00000487091 GRAPLQ8TC17 118 aaPredicted RBP24.61■■□□□ 1.53
CLIP2-206ENST00000487091 TMC4Q7Z404 712 aa24.6■■□□□ 1.53
CLIP2-206ENST00000487091 SLC51AQ86UW1 340 aa24.6■■□□□ 1.53
CLIP2-206ENST00000487091 LARGE2Q8N3Y3 721 aa24.6■■□□□ 1.53
CLIP2-206ENST00000487091 ZNF428Q96B54 188 aa24.6■■□□□ 1.53
CLIP2-206ENST00000487091 DDX60Q8IY21 1712 aaKnown RBP24.6■■□□□ 1.53
CLIP2-206ENST00000487091 GPC2Q8N158 579 aa24.59■■□□□ 1.53
CLIP2-206ENST00000487091 ZBTB38Q8NAP3 1195 aaPredicted RBP24.59■■□□□ 1.53
CLIP2-206ENST00000487091 SUPT20HQ8NEM7 779 aa24.59■■□□□ 1.53
CLIP2-206ENST00000487091 RTFDC1Q9BY42 306 aaPredicted RBP24.59■■□□□ 1.53
CLIP2-206ENST00000487091 TAF1DQ9H5J8 278 aaPredicted RBP24.59■■□□□ 1.53
CLIP2-206ENST00000487091 EIF6P56537 245 aaKnown RBP24.58■■□□□ 1.53
CLIP2-206ENST00000487091 TWISTNBQ3B726 338 aaPredicted RBP24.58■■□□□ 1.53
CLIP2-206ENST00000487091 CHADLQ6NUI6 762 aa24.58■■□□□ 1.53
CLIP2-206ENST00000487091 WDR63Q8IWG1 891 aa24.58■■□□□ 1.53
CLIP2-206ENST00000487091 CCDC191Q8NCU4 936 aa24.58■■□□□ 1.53
CLIP2-206ENST00000487091 MYD88Q99836 296 aa24.58■■□□□ 1.53
CLIP2-206ENST00000487091 COL4A5P29400 1685 aa24.57■■□□□ 1.52
CLIP2-206ENST00000487091 IRS4O14654 1257 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms