RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 PDCP20941 246 aa14.52□□□□□ -0.09
COL3A1-206ENST00000487010 CDC37L1Q7L3B6 337 aa14.52□□□□□ -0.09
COL3A1-206ENST00000487010 AACSQ86V21 672 aa14.52□□□□□ -0.09
COL3A1-206ENST00000487010 C9orf78Q9NZ63 289 aaPredicted RBP14.52□□□□□ -0.09
COL3A1-206ENST00000487010 MRVI1Q9Y6F6 885 aa14.52□□□□□ -0.09
COL3A1-206ENST00000487010 SLC27A2O14975 620 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 KCNJ4P48050 445 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 TYRO3Q06418 890 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 NMIQ13287 307 aaPredicted RBP14.51□□□□□ -0.09
COL3A1-206ENST00000487010 FAM227BQ96M60 508 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 BCL2L12Q9HB09 334 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 SNRKQ9NRH2 765 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 SLIT1O75093 1534 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 LTN1O94822 1766 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 CHAF1AQ13111 956 aaPredicted RBP14.51□□□□□ -0.09
COL3A1-206ENST00000487010 DBF4Q9UBU7 674 aaPredicted RBP14.51□□□□□ -0.09
COL3A1-206ENST00000487010 HDAC5Q9UQL6 1122 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 MAP3K2Q9Y2U5 619 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 ARHGAP23Q9P227 1491 aa14.51□□□□□ -0.09
COL3A1-206ENST00000487010 FAM177BA6PVY3 158 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 BTBD11A6QL63 1104 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 ANKRD1Q15327 319 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 FERMT3Q86UX7 667 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 ALDH8A1Q9H2A2 487 aaPredicted RBP14.5□□□□□ -0.09
COL3A1-206ENST00000487010 CHMP3Q9Y3E7 222 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 RIOK3O14730 519 aaKnown RBP14.5□□□□□ -0.09
COL3A1-206ENST00000487010 COL9A3Q14050 684 aaPredicted RBP14.5□□□□□ -0.09
COL3A1-206ENST00000487010 CAMK4Q16566 473 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 FAM173BQ6P4H8 233 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 IP6K1Q92551 441 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
COL3A1-206ENST00000487010 SCAND2PQ9GZW5 306 aaPredicted RBP14.5□□□□□ -0.09
COL3A1-206ENST00000487010 LMO7Q8WWI1 1683 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 PTGS1P23219 599 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 TEFQ10587 303 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 BLOC1S2Q6QNY1 142 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 KSR2Q6VAB6 950 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 LUZP1Q86V48 1076 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 TNMDQ9H2S6 317 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 ADGRL3Q9HAR2 1447 aa14.49□□□□□ -0.09
COL3A1-206ENST00000487010 SASH1O94885 1247 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 RPS6KB1P23443 525 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 RNF20Q5VTR2 975 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 EAF2Q96CJ1 260 aaPredicted RBP14.48□□□□□ -0.09
COL3A1-206ENST00000487010 CBX8Q9HC52 389 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 DACT1Q9NYF0 836 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 CWF19L2Q2TBE0 894 aaKnown RBP14.48□□□□□ -0.09
COL3A1-206ENST00000487010 AKAP4Q5JQC9 854 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 PPP4R3BQ5MIZ7 849 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 RBM43Q6ZSC3 357 aaKnown RBP14.48□□□□□ -0.09
COL3A1-206ENST00000487010 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 SPATA32Q96LK8 384 aa14.48□□□□□ -0.09
COL3A1-206ENST00000487010 DDX19AQ9NUU7 478 aaKnown RBP14.48□□□□□ -0.09
COL3A1-206ENST00000487010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.48□□□□□ -0.09
COL3A1-206ENST00000487010 NPHP4O75161 1426 aaPredicted RBP14.48□□□□□ -0.09
COL3A1-206ENST00000487010 A0A0D9SFI3 127 aa14.47□□□□□ -0.09
COL3A1-206ENST00000487010 GOLGA6L4A6NEF3 574 aa14.47□□□□□ -0.09
COL3A1-206ENST00000487010 CTIFO43310 598 aaKnown RBP14.47□□□□□ -0.09
COL3A1-206ENST00000487010 G3BP1Q13283 466 aaKnown RBP eCLIP14.47□□□□□ -0.09
COL3A1-206ENST00000487010 TOB2Q14106 344 aaPredicted RBP14.47□□□□□ -0.09
COL3A1-206ENST00000487010 ANO6Q4KMQ2 910 aa14.47□□□□□ -0.09
COL3A1-206ENST00000487010 LARP1Q6PKG0 1096 aaKnown RBP14.47□□□□□ -0.09
COL3A1-206ENST00000487010 CKAP2LQ8IYA6 745 aa14.47□□□□□ -0.09
COL3A1-206ENST00000487010 LEO1Q8WVC0 666 aaPredicted RBP14.47□□□□□ -0.09
COL3A1-206ENST00000487010 ANKRD7Q92527 254 aa14.47□□□□□ -0.09
COL3A1-206ENST00000487010 CCDC8Q9H0W5 538 aaPredicted RBP14.47□□□□□ -0.09
COL3A1-206ENST00000487010 NPHP3Q7Z494 1330 aa14.47□□□□□ -0.09
COL3A1-206ENST00000487010 PROSER3Q2NL68 480 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 UTP14CQ5TAP6 766 aaKnown RBP14.46□□□□□ -0.09
COL3A1-206ENST00000487010 SUCLG2Q96I99 432 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 CLSTN2Q9H4D0 955 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 TFIP11Q9UBB9 837 aaKnown RBP14.46□□□□□ -0.09
COL3A1-206ENST00000487010 MED23Q9ULK4 1368 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 SETD1BQ9UPS6 1966 aaKnown RBP14.46□□□□□ -0.09
COL3A1-206ENST00000487010 ZSCAN20P17040 1043 aaPredicted RBP14.46□□□□□ -0.09
COL3A1-206ENST00000487010 DMTNQ08495 405 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 TSGA10IPQ3SY00 556 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 ZNF530Q6P9A1 599 aaPredicted RBP14.46□□□□□ -0.09
COL3A1-206ENST00000487010 MPRIPQ6WCQ1 1025 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 CCDC186Q7Z3E2 898 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 PLA2G4DQ86XP0 818 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 PDCL2Q8N4E4 241 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 KAZALD1Q96I82 304 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 TCEANC2Q96MN5 208 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 FSD1Q9BTV5 496 aa14.46□□□□□ -0.09
COL3A1-206ENST00000487010 UTYO14607 1347 aa14.46□□□□□ -0.1
COL3A1-206ENST00000487010 GRM8O00222 908 aa14.45□□□□□ -0.1
COL3A1-206ENST00000487010 GIGYF1O75420 1035 aaPredicted RBP14.45□□□□□ -0.1
COL3A1-206ENST00000487010 ZNF75DP51815 510 aa14.45□□□□□ -0.1
COL3A1-206ENST00000487010 CBX1P83916 185 aa14.45□□□□□ -0.1
COL3A1-206ENST00000487010 ATP2B3Q16720 1220 aa14.45□□□□□ -0.1
COL3A1-206ENST00000487010 PLPPR3Q6T4P5 718 aa14.45□□□□□ -0.1
COL3A1-206ENST00000487010 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.45□□□□□ -0.1
COL3A1-206ENST00000487010 TDRD7Q8NHU6 1098 aaKnown RBP14.45□□□□□ -0.1
COL3A1-206ENST00000487010 BOLA2Q9H3K6 86 aa14.45□□□□□ -0.1
COL3A1-206ENST00000487010 TLR7Q9NYK1 1049 aaKnown RBP14.45□□□□□ -0.1
COL3A1-206ENST00000487010 HMG20BQ9P0W2 317 aa14.45□□□□□ -0.1
COL3A1-206ENST00000487010 TAF6LQ9Y6J9 622 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms