RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 PDLIM2Q96JY6 352 aa14.82□□□□□ -0.04
PTCD2-204ENST00000486995 SNRKQ9NRH2 765 aa14.82□□□□□ -0.04
PTCD2-204ENST00000486995 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
PTCD2-204ENST00000486995 SCN11AQ9UI33 1791 aa14.82□□□□□ -0.04
PTCD2-204ENST00000486995 ZSCAN22P10073 491 aaPredicted RBP14.82□□□□□ -0.04
PTCD2-204ENST00000486995 SYT1P21579 422 aa14.82□□□□□ -0.04
PTCD2-204ENST00000486995 NMIQ13287 307 aaPredicted RBP14.82□□□□□ -0.04
PTCD2-204ENST00000486995 MAP4K1Q92918 833 aa14.82□□□□□ -0.04
PTCD2-204ENST00000486995 HIP1O00291 1037 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 CYP27B1O15528 508 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 STX6O43752 255 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 ATF3P18847 181 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 ANKRD13DQ6ZTN6 518 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 TMEM87AQ8NBN3 555 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 CABLES1Q8TDN4 633 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 BOLA2Q9H3K6 86 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 SNRPA1P09661 255 aaKnown RBP14.81□□□□□ -0.04
PTCD2-204ENST00000486995 DCAF5Q96JK2 942 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 SMC3Q9UQE7 1217 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
PTCD2-204ENST00000486995 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
PTCD2-204ENST00000486995 CREB3L3Q68CJ9 461 aa14.8□□□□□ -0.04
PTCD2-204ENST00000486995 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
PTCD2-204ENST00000486995 PIP4K2AP48426 406 aaPredicted RBP14.8□□□□□ -0.04
PTCD2-204ENST00000486995 ZSCAN30Q86W11 494 aa14.8□□□□□ -0.04
PTCD2-204ENST00000486995 COL18A1P39060 1754 aa14.8□□□□□ -0.04
PTCD2-204ENST00000486995 ZKSCAN1P17029 563 aaPredicted RBP14.79□□□□□ -0.04
PTCD2-204ENST00000486995 CHRNA2Q15822 529 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 CCDC83Q8IWF9 413 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 ZSCAN31Q96LW9 406 aaPredicted RBP14.79□□□□□ -0.04
PTCD2-204ENST00000486995 TMEM94Q12767 1356 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 A0A0D9SFI3 127 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 RFX5P48382 616 aaPredicted RBP14.79□□□□□ -0.04
PTCD2-204ENST00000486995 ST3GAL1Q11201 340 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 TTC5Q8N0Z6 440 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 DDX54Q8TDD1 881 aaKnown RBP14.79□□□□□ -0.04
PTCD2-204ENST00000486995 JARID2Q92833 1246 aaPredicted RBP14.79□□□□□ -0.04
PTCD2-204ENST00000486995 SYAP1Q96A49 352 aaPredicted RBP14.79□□□□□ -0.04
PTCD2-204ENST00000486995 COPRSQ9NQ92 184 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 MRC1P22897 1456 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 F13A1P00488 732 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 HS1BP3Q53T59 392 aa14.79□□□□□ -0.04
PTCD2-204ENST00000486995 SH2B1Q9NRF2 756 aaPredicted RBP14.79□□□□□ -0.04
PTCD2-204ENST00000486995 ABCC6O95255 1503 aa14.78□□□□□ -0.04
PTCD2-204ENST00000486995 SLC27A2O14975 620 aa14.78□□□□□ -0.04
PTCD2-204ENST00000486995 GJB2P29033 226 aa14.78□□□□□ -0.04
PTCD2-204ENST00000486995 COL9A3Q14050 684 aaPredicted RBP14.78□□□□□ -0.04
PTCD2-204ENST00000486995 ME3Q16798 604 aa14.78□□□□□ -0.04
PTCD2-204ENST00000486995 FMNL2Q96PY5 1086 aa14.78□□□□□ -0.04
PTCD2-204ENST00000486995 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
PTCD2-204ENST00000486995 PTPN12Q05209 780 aaKnown RBP14.78□□□□□ -0.04
PTCD2-204ENST00000486995 NAP1L5Q96NT1 182 aaPredicted RBP14.78□□□□□ -0.04
PTCD2-204ENST00000486995 DTNBO60941 627 aa14.77□□□□□ -0.04
PTCD2-204ENST00000486995 KCNJ4P48050 445 aa14.77□□□□□ -0.04
PTCD2-204ENST00000486995 RABL6Q3YEC7 729 aaPredicted RBP14.77□□□□□ -0.04
PTCD2-204ENST00000486995 TSPY26PQ9H489 355 aa14.77□□□□□ -0.04
PTCD2-204ENST00000486995 PLEKHG2Q9H7P9 1386 aa14.77□□□□□ -0.05
PTCD2-204ENST00000486995 MED23Q9ULK4 1368 aa14.77□□□□□ -0.05
PTCD2-204ENST00000486995 RNF214Q8ND24 703 aa14.77□□□□□ -0.05
PTCD2-204ENST00000486995 TPCN1Q9ULQ1 816 aa14.77□□□□□ -0.05
PTCD2-204ENST00000486995 MTMR6Q9Y217 621 aa14.77□□□□□ -0.05
PTCD2-204ENST00000486995 UBE3BQ7Z3V4 1068 aa14.76□□□□□ -0.05
PTCD2-204ENST00000486995 EDC3Q96F86 508 aaKnown RBP14.76□□□□□ -0.05
PTCD2-204ENST00000486995 DBNLQ9UJU6 430 aaKnown RBP14.76□□□□□ -0.05
PTCD2-204ENST00000486995 TCHHQ07283 1943 aa14.76□□□□□ -0.05
PTCD2-204ENST00000486995 PSMA5P28066 241 aa14.76□□□□□ -0.05
PTCD2-204ENST00000486995 TFCP2Q12800 502 aa14.76□□□□□ -0.05
PTCD2-204ENST00000486995 ZNF589Q86UQ0 364 aaPredicted RBP14.76□□□□□ -0.05
PTCD2-204ENST00000486995 COL15A1P39059 1388 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 ATP5J2-PTCD1G3V325 749 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 PTCD1O75127 700 aaKnown RBP14.75□□□□□ -0.05
PTCD2-204ENST00000486995 ATP5JP18859 108 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 CABP4P57796 275 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 TNNI3KQ59H18 835 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 NECAB1Q8N987 351 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 ATP6V1DQ9Y5K8 247 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 TAF6LQ9Y6J9 622 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 FPGT-TNNI3KV9GXZ4 949 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 DCCP43146 1447 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 PHF14O94880 888 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 CASP7P55210 303 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 NOL7Q9UMY1 257 aaKnown RBP14.75□□□□□ -0.05
PTCD2-204ENST00000486995 JCADQ9P266 1359 aa14.75□□□□□ -0.05
PTCD2-204ENST00000486995 A0A087WZG4 1122 aa14.74□□□□□ -0.05
PTCD2-204ENST00000486995 UBE2HP62256 183 aa14.74□□□□□ -0.05
PTCD2-204ENST00000486995 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.74□□□□□ -0.05
PTCD2-204ENST00000486995 SPATA31A3Q5VYP0 1347 aa14.74□□□□□ -0.05
PTCD2-204ENST00000486995 TAF5LO75529 589 aa14.74□□□□□ -0.05
PTCD2-204ENST00000486995 TSGA10IPQ3SY00 556 aa14.74□□□□□ -0.05
PTCD2-204ENST00000486995 RNF20Q5VTR2 975 aa14.74□□□□□ -0.05
PTCD2-204ENST00000486995 PLBD2Q8NHP8 589 aa14.74□□□□□ -0.05
PTCD2-204ENST00000486995 MSNP26038 577 aaKnown RBP14.73□□□□□ -0.05
PTCD2-204ENST00000486995 CCDC183Q5T5S1 534 aa14.73□□□□□ -0.05
PTCD2-204ENST00000486995 ALDH8A1Q9H2A2 487 aaPredicted RBP14.73□□□□□ -0.05
PTCD2-204ENST00000486995 FIBPO43427 364 aa14.73□□□□□ -0.05
PTCD2-204ENST00000486995 RPS6KB1P23443 525 aa14.73□□□□□ -0.05
PTCD2-204ENST00000486995 DNM1Q05193 864 aaKnown RBP14.73□□□□□ -0.05
PTCD2-204ENST00000486995 BLOC1S2Q6QNY1 142 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms