RNA–Protein interactions for RNA: ENST00000486930.5

RPL13A-211, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-211ENST00000486930 HOXB7P09629 217 aa20.28■□□□□ 0.84
RPL13A-211ENST00000486930 ZNF853P0CG23 659 aa20.28■□□□□ 0.84
RPL13A-211ENST00000486930 FKBP4Q02790 459 aaKnown RBP eCLIP20.28■□□□□ 0.84
RPL13A-211ENST00000486930 SLC10A5Q5PT55 438 aa20.28■□□□□ 0.84
RPL13A-211ENST00000486930 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
RPL13A-211ENST00000486930 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
RPL13A-211ENST00000486930 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
RPL13A-211ENST00000486930 MBIPQ9NS73 344 aa20.27■□□□□ 0.84
RPL13A-211ENST00000486930 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
RPL13A-211ENST00000486930 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 DUSP27Q5VZP5 1158 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 RBM17Q96I25 401 aaKnown RBP20.26■□□□□ 0.83
RPL13A-211ENST00000486930 CRAMP1Q96RY5 1269 aa20.26■□□□□ 0.83
RPL13A-211ENST00000486930 ZNF277Q9NRM2 450 aaPredicted RBP20.26■□□□□ 0.83
RPL13A-211ENST00000486930 DDNO94850 711 aaPredicted RBP20.25■□□□□ 0.83
RPL13A-211ENST00000486930 NLRP10Q86W26 655 aa20.25■□□□□ 0.83
RPL13A-211ENST00000486930 SYNE4Q8N205 404 aa20.25■□□□□ 0.83
RPL13A-211ENST00000486930 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
RPL13A-211ENST00000486930 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
RPL13A-211ENST00000486930 CC2D2BQ6DHV5 1058 aa20.24■□□□□ 0.83
RPL13A-211ENST00000486930 IFT57Q9NWB7 429 aa20.24■□□□□ 0.83
RPL13A-211ENST00000486930 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
RPL13A-211ENST00000486930 GNAI1P63096 354 aa20.23■□□□□ 0.83
RPL13A-211ENST00000486930 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
RPL13A-211ENST00000486930 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
RPL13A-211ENST00000486930 PSMD1Q99460 953 aa20.23■□□□□ 0.83
RPL13A-211ENST00000486930 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
RPL13A-211ENST00000486930 HYPKQ9NX55 129 aa20.22■□□□□ 0.83
RPL13A-211ENST00000486930 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
RPL13A-211ENST00000486930 SNED1Q8TER0 1413 aa20.21■□□□□ 0.83
RPL13A-211ENST00000486930 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
RPL13A-211ENST00000486930 GRIPAP1Q4V328 841 aa20.21■□□□□ 0.83
RPL13A-211ENST00000486930 TRMT112Q9UI30 125 aaKnown RBP20.21■□□□□ 0.83
RPL13A-211ENST00000486930 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
RPL13A-211ENST00000486930 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
RPL13A-211ENST00000486930 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
RPL13A-211ENST00000486930 FZD9O00144 591 aa20.19■□□□□ 0.82
RPL13A-211ENST00000486930 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
RPL13A-211ENST00000486930 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
RPL13A-211ENST00000486930 HTRA3P83110 453 aa20.19■□□□□ 0.82
RPL13A-211ENST00000486930 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
RPL13A-211ENST00000486930 ANKRD36CQ5JPF3 1778 aa20.18■□□□□ 0.82
RPL13A-211ENST00000486930 C8orf58Q8NAV2 365 aa20.18■□□□□ 0.82
RPL13A-211ENST00000486930 ISCA1Q9BUE6 129 aa20.18■□□□□ 0.82
RPL13A-211ENST00000486930 SH3TC1Q8TE82 1336 aa20.18■□□□□ 0.82
RPL13A-211ENST00000486930 SLC51AQ86UW1 340 aa20.17■□□□□ 0.82
RPL13A-211ENST00000486930 ATP6V0A2Q9Y487 856 aa20.17■□□□□ 0.82
RPL13A-211ENST00000486930 ZNF541Q9H0D2 1346 aa20.17■□□□□ 0.82
RPL13A-211ENST00000486930 IQCA1LA6NCM1 817 aa20.16■□□□□ 0.82
RPL13A-211ENST00000486930 ATP5J2-PTCD1G3V325 749 aa20.16■□□□□ 0.82
RPL13A-211ENST00000486930 BBOX1O75936 387 aa20.16■□□□□ 0.82
RPL13A-211ENST00000486930 JDP2Q8WYK2 163 aa20.16■□□□□ 0.82
RPL13A-211ENST00000486930 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
RPL13A-211ENST00000486930 ABCC4O15439 1325 aa20.16■□□□□ 0.82
RPL13A-211ENST00000486930 TRIM28Q13263 835 aaKnown RBP20.15■□□□□ 0.82
RPL13A-211ENST00000486930 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
RPL13A-211ENST00000486930 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
RPL13A-211ENST00000486930 PHAXQ9H814 394 aaKnown RBP20.15■□□□□ 0.82
RPL13A-211ENST00000486930 POTEIP0CG38 1075 aa20.14■□□□□ 0.81
RPL13A-211ENST00000486930 POTEJP0CG39 1038 aa20.14■□□□□ 0.81
RPL13A-211ENST00000486930 CHADLQ6NUI6 762 aa20.14■□□□□ 0.81
RPL13A-211ENST00000486930 SP8Q8IXZ3 490 aa20.14■□□□□ 0.81
RPL13A-211ENST00000486930 KLRG1Q96E93 195 aa20.14■□□□□ 0.81
RPL13A-211ENST00000486930 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
RPL13A-211ENST00000486930 TAF1DQ9H5J8 278 aaPredicted RBP20.14■□□□□ 0.81
RPL13A-211ENST00000486930 ANP32CO43423 234 aa20.13■□□□□ 0.81
RPL13A-211ENST00000486930 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
RPL13A-211ENST00000486930 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
RPL13A-211ENST00000486930 GPC2Q8N158 579 aa20.13■□□□□ 0.81
RPL13A-211ENST00000486930 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
RPL13A-211ENST00000486930 SCN4AP35499 1836 aa20.13■□□□□ 0.81
RPL13A-211ENST00000486930 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
RPL13A-211ENST00000486930 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
RPL13A-211ENST00000486930 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
RPL13A-211ENST00000486930 VPS33BQ9H267 617 aa20.12■□□□□ 0.81
RPL13A-211ENST00000486930 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
RPL13A-211ENST00000486930 HACL1Q9UJ83 578 aa20.12■□□□□ 0.81
RPL13A-211ENST00000486930 LAMB2P55268 1798 aa20.12■□□□□ 0.81
RPL13A-211ENST00000486930 PCNTO95613 3336 aa20.11■□□□□ 0.81
RPL13A-211ENST00000486930 EIF6P56537 245 aaKnown RBP20.11■□□□□ 0.81
RPL13A-211ENST00000486930 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
RPL13A-211ENST00000486930 GRAPQ13588 217 aa20.11■□□□□ 0.81
RPL13A-211ENST00000486930 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
RPL13A-211ENST00000486930 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
RPL13A-211ENST00000486930 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
RPL13A-211ENST00000486930 RTFDC1Q9BY42 306 aaPredicted RBP20.11■□□□□ 0.81
RPL13A-211ENST00000486930 COL4A5P29400 1685 aa20.1■□□□□ 0.81
RPL13A-211ENST00000486930 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
RPL13A-211ENST00000486930 LDHDQ86WU2 507 aa20.1■□□□□ 0.81
RPL13A-211ENST00000486930 TSR2Q969E8 191 aaKnown RBP20.1■□□□□ 0.81
RPL13A-211ENST00000486930 PPIP5K2O43314 1243 aa20.09■□□□□ 0.81
RPL13A-211ENST00000486930 EPHX2P34913 555 aa20.09■□□□□ 0.81
RPL13A-211ENST00000486930 RTL5Q5HYW3 569 aaPredicted RBP20.09■□□□□ 0.81
RPL13A-211ENST00000486930 MPNDQ8N594 471 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms