RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 DICER1Q9UPY3 1922 aaKnown RBP16.9■□□□□ 0.3
SF1-216ENST00000486867 DDX58O95786 925 aaKnown RBP16.9■□□□□ 0.3
SF1-216ENST00000486867 SRGNP10124 158 aa16.9■□□□□ 0.3
SF1-216ENST00000486867 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
SF1-216ENST00000486867 KSR2Q6VAB6 950 aa16.9■□□□□ 0.3
SF1-216ENST00000486867 G2E3Q7L622 706 aa16.9■□□□□ 0.3
SF1-216ENST00000486867 H0YIN7 160 aa16.89■□□□□ 0.29
SF1-216ENST00000486867 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
SF1-216ENST00000486867 FLIIQ13045 1269 aa16.89■□□□□ 0.29
SF1-216ENST00000486867 STYK1Q6J9G0 422 aa16.89■□□□□ 0.29
SF1-216ENST00000486867 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.29
SF1-216ENST00000486867 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
SF1-216ENST00000486867 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
SF1-216ENST00000486867 UTP14AQ9BVJ6 771 aaKnown RBP16.89■□□□□ 0.29
SF1-216ENST00000486867 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
SF1-216ENST00000486867 RIC3Q7Z5B4 369 aa16.88■□□□□ 0.29
SF1-216ENST00000486867 TAF1P21675 1872 aa16.88■□□□□ 0.29
SF1-216ENST00000486867 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
SF1-216ENST00000486867 TCERG1O14776 1098 aaKnown RBP16.87■□□□□ 0.29
SF1-216ENST00000486867 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
SF1-216ENST00000486867 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
SF1-216ENST00000486867 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
SF1-216ENST00000486867 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
SF1-216ENST00000486867 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
SF1-216ENST00000486867 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
SF1-216ENST00000486867 NPHP1O15259 732 aa16.86■□□□□ 0.29
SF1-216ENST00000486867 NPR1P16066 1061 aa16.86■□□□□ 0.29
SF1-216ENST00000486867 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
SF1-216ENST00000486867 HNRNPUQ00839 825 aaKnown RBP eCLIP16.86■□□□□ 0.29
SF1-216ENST00000486867 TTLL6Q8N841 843 aa16.86■□□□□ 0.29
SF1-216ENST00000486867 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
SF1-216ENST00000486867 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
SF1-216ENST00000486867 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
SF1-216ENST00000486867 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
SF1-216ENST00000486867 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
SF1-216ENST00000486867 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
SF1-216ENST00000486867 LRRC37AA6NMS7 1700 aa16.84■□□□□ 0.29
SF1-216ENST00000486867 IGKV5-2P06315 115 aa16.84■□□□□ 0.29
SF1-216ENST00000486867 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
SF1-216ENST00000486867 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
SF1-216ENST00000486867 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
SF1-216ENST00000486867 CNKSR1Q969H4 720 aa16.84■□□□□ 0.29
SF1-216ENST00000486867 MYD88Q99836 296 aa16.84■□□□□ 0.29
SF1-216ENST00000486867 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
SF1-216ENST00000486867 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
SF1-216ENST00000486867 MRPL50Q8N5N7 158 aaKnown RBP16.83■□□□□ 0.28
SF1-216ENST00000486867 ZBTB38Q8NAP3 1195 aaPredicted RBP16.83■□□□□ 0.28
SF1-216ENST00000486867 SNED1Q8TER0 1413 aa16.83■□□□□ 0.28
SF1-216ENST00000486867 C7orf43Q8WVR3 580 aa16.83■□□□□ 0.28
SF1-216ENST00000486867 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
SF1-216ENST00000486867 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
SF1-216ENST00000486867 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
SF1-216ENST00000486867 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
SF1-216ENST00000486867 SSH1Q8WYL5 1049 aa16.82■□□□□ 0.28
SF1-216ENST00000486867 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
SF1-216ENST00000486867 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
SF1-216ENST00000486867 CDHR2Q9BYE9 1310 aa16.81■□□□□ 0.28
SF1-216ENST00000486867 NEURL1BA8MQ27 555 aa16.81■□□□□ 0.28
SF1-216ENST00000486867 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
SF1-216ENST00000486867 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
SF1-216ENST00000486867 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.285e-7■■□□□ 13.6
SF1-216ENST00000486867 NLRP3Q96P20 1036 aa16.81■□□□□ 0.28
SF1-216ENST00000486867 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
SF1-216ENST00000486867 PTPRCP08575 1304 aa16.8■□□□□ 0.28
SF1-216ENST00000486867 ALDH1B1P30837 517 aa16.8■□□□□ 0.28
SF1-216ENST00000486867 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
SF1-216ENST00000486867 FAM89AQ96GI7 184 aa16.8■□□□□ 0.28
SF1-216ENST00000486867 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
SF1-216ENST00000486867 HCLS1P14317 486 aaPredicted RBP16.79■□□□□ 0.28
SF1-216ENST00000486867 SF3B3Q15393 1217 aaKnown RBP16.79■□□□□ 0.28
SF1-216ENST00000486867 LTBP1Q14766 1721 aa16.79■□□□□ 0.28
SF1-216ENST00000486867 COL4A1P02462 1669 aa16.78■□□□□ 0.28
SF1-216ENST00000486867 LTBP3Q9NS15 1303 aa16.78■□□□□ 0.28
SF1-216ENST00000486867 H7C1W4 665 aa16.78■□□□□ 0.28
SF1-216ENST00000486867 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
SF1-216ENST00000486867 CASP7P55210 303 aa16.78■□□□□ 0.28
SF1-216ENST00000486867 CWF19L2Q2TBE0 894 aaKnown RBP16.78■□□□□ 0.28
SF1-216ENST00000486867 BEND3Q5T5X7 828 aa16.78■□□□□ 0.28
SF1-216ENST00000486867 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.28
SF1-216ENST00000486867 RARSP54136 660 aaKnown RBP16.77■□□□□ 0.28
SF1-216ENST00000486867 GCKRQ14397 625 aa16.77■□□□□ 0.28
SF1-216ENST00000486867 SOGA3Q5TF21 947 aa16.77■□□□□ 0.28
SF1-216ENST00000486867 RPGRQ92834 1020 aaKnown RBP16.77■□□□□ 0.28
SF1-216ENST00000486867 SPEF2Q9C093 1822 aa16.77■□□□□ 0.27
SF1-216ENST00000486867 F6X3S4 739 aa16.76■□□□□ 0.27
SF1-216ENST00000486867 NFKBIEO00221 500 aa16.76■□□□□ 0.27
SF1-216ENST00000486867 ARHGAP27Q6ZUM4 889 aa16.76■□□□□ 0.27
SF1-216ENST00000486867 RBM17Q96I25 401 aaKnown RBP16.76■□□□□ 0.27
SF1-216ENST00000486867 PLA2G12BQ9BX93 195 aa16.76■□□□□ 0.27
SF1-216ENST00000486867 ABCC4O15439 1325 aa16.75■□□□□ 0.27
SF1-216ENST00000486867 C21orf2O43822 256 aa16.75■□□□□ 0.27
SF1-216ENST00000486867 PDE8AO60658 829 aa16.75■□□□□ 0.27
SF1-216ENST00000486867 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
SF1-216ENST00000486867 YY1P25490 414 aa16.75■□□□□ 0.27
SF1-216ENST00000486867 CC2D2BQ6DHV5 1058 aa16.75■□□□□ 0.27
SF1-216ENST00000486867 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
SF1-216ENST00000486867 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
SF1-216ENST00000486867 A0A1B0GUL6 1792 aa16.74■□□□□ 0.27
SF1-216ENST00000486867 BBOX1O75936 387 aa16.73■□□□□ 0.27
SF1-216ENST00000486867 PRELPP51888 382 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms